Olfactory bulb cluster formation (Migliore et al. 2010)

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Accession:127995
Functional roles of distributed synaptic clusters in the mitral-granule cell network of the olfactory bulb.
Reference:
1 . Migliore M, Hines ML, McTavish TS, Shepherd GM (2010) Functional roles of distributed synaptic clusters in the mitral-granule cell network of the olfactory bulb. Front Integr Neurosci 4:122 [PubMed]
Model Information (Click on a link to find other models with that property)
Model Type: Realistic Network;
Brain Region(s)/Organism: Olfactory bulb;
Cell Type(s): Olfactory bulb main mitral GLU cell; Olfactory bulb main interneuron granule MC GABA cell;
Channel(s): I Na,t; I K;
Gap Junctions:
Receptor(s): AMPA;
Gene(s):
Transmitter(s):
Simulation Environment: NEURON;
Model Concept(s): Action Potential Initiation; Short-term Synaptic Plasticity; Olfaction;
Implementer(s): Hines, Michael [Michael.Hines at Yale.edu]; Migliore, Michele [Michele.Migliore at Yale.edu];
Search NeuronDB for information about:  Olfactory bulb main mitral GLU cell; Olfactory bulb main interneuron granule MC GABA cell; AMPA; I Na,t; I K;
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migliore2010
README
ampanmda.mod
fi.mod
kamt.mod *
kdrmt.mod *
naxn.mod *
ThreshDetect.mod *
.hg_archival.txt
6.2.3.2203.spk
allsynhinton.hoc *
clear.hoc *
connect.hoc
granule.hoc
iterator.hoc
lptiter.hoc
mgrs.hoc
mitral.hoc
mosinit.hoc
net-5mt-100-900.hoc
odors.txt
parinit.hoc
pattern.hoc
perfrun.hoc
show.hoc
somesyn.hoc *
start.hoc
start.ses *
stim-odors-AB-seq.hoc
weight_movie.hoc *
weight-forfig3-bulb1.dat
weightsave.hoc
                            
begintemplate SomeSyn
external graphList, tstop
objref g, cells
proc init() {local i
	build()
	draw($o1)
}

proc unref() {
	//print "refcount=", $1
	if ($1 == 0) {
		graphList[0].remove(graphList.index(g))
	}
}

proc build() {
	g = new Graph(0)
	g.view(0, 0, 1, 1, 400, 250, 700, 250)
	graphList[0].append(g)
	g.size(0, tstop, 0, 1)
}
proc draw() {local i, m, gr  localobj nc, syn, s, s2
	s = new String()
	s2 = new String()
	g.label(.6,.9,"",2)
	for i=0, $o1.count-1 {
		nc = $o1.object(i)
		syn = nc.syn
		m = syn.mgid		
		ggid = syn.ggid
		sprint(s2.s, "%s.weight[2]", nc)
		sprint(s.s, "(%s, %d, %d) %s", syn, m, ggid, nc)
		g.addvar(s.s, s2.s)
	}
}
endtemplate SomeSyn


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