Spike exchange methods for a Blue Gene/P supercomputer (Hines et al., 2011)

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Accession:137845
Tests several spike exchange methods on a Blue Gene/P supercomputer on up to 64K cores.
Reference:
1 . Hines M, Kumar S, Schürmann F (2011) Comparison of neuronal spike exchange methods on a Blue Gene/P supercomputer. Front Comput Neurosci 5:49 [PubMed]
Model Information (Click on a link to find other models with that property)
Model Type: Realistic Network;
Brain Region(s)/Organism:
Cell Type(s):
Channel(s):
Gap Junctions:
Receptor(s):
Gene(s):
Transmitter(s):
Simulation Environment: NEURON;
Model Concept(s): Methods;
Implementer(s): Hines, Michael [Michael.Hines at Yale.edu];
#!/bin/sh

np=256
np=65536

workdir=/gpfs/home/hines/perf1
env='BG_COREDUMPDISABLED=1'

#cobalt-mpirun -nofree -mode vn -np $np -verbose 2 -cwd $workdir -env "$env" powerpc64/special -mpi -c runs=1 runs.hoc
#cobalt-mpirun -nofree -mode vn -np $np -verbose 2 -cwd $workdir -env "$env" powerpc64/special -mpi -c runs=2 runs.hoc
#cobalt-mpirun -nofree -mode vn -np $np -verbose 2 -cwd $workdir -env "$env" powerpc64/special -mpi -c runs=3 runs.hoc
cobalt-mpirun -nofree -mode vn -np $np -verbose 2 -cwd $workdir -env "$env" powerpc64/special -mpi -c runs=4 runs.hoc
cobalt-mpirun -nofree -mode vn -np $np -verbose 2 -cwd $workdir -env "$env" powerpc64/special -mpi -c runs=5 runs.hoc

cobalt-mpirun -free wait


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