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The corresponding page is
https://modeldb.science/168591
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3D olfactory bulb: operators (Migliore et al, 2015)
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Model Information
Model File
Citations
Accession:
168591
"... Using a 3D model of mitral and granule cell interactions supported by experimental findings, combined with a matrix-based representation of glomerular operations, we identify the mechanisms for forming one or more glomerular units in response to a given odor, how and to what extent the glomerular units interfere or interact with each other during learning, their computational role within the olfactory bulb microcircuit, and how their actions can be formalized into a theoretical framework in which the olfactory bulb can be considered to contain "odor operators" unique to each individual. ..."
Reference:
1 .
Migliore M, Cavarretta F, Marasco A, Tulumello E, Hines ML, Shepherd GM (2015) Synaptic clusters function as odor operators in the olfactory bulb.
Proc Natl Acad Sci U S A
112
:8499-504
[
PubMed
]
Model Information
(Click on a link to find other models with that property)
Model Type:
Realistic Network;
Brain Region(s)/Organism:
Cell Type(s):
Olfactory bulb main mitral GLU cell;
Olfactory bulb main interneuron granule MC GABA cell;
Channel(s):
I Na,t;
I A;
I K;
Gap Junctions:
Receptor(s):
AMPA;
NMDA;
Gaba;
Gene(s):
Transmitter(s):
Gaba;
Glutamate;
Simulation Environment:
NEURON;
Python;
Model Concept(s):
Activity Patterns;
Dendritic Action Potentials;
Active Dendrites;
Synaptic Plasticity;
Action Potentials;
Synaptic Integration;
Unsupervised Learning;
Sensory processing;
Olfaction;
Implementer(s):
Migliore, Michele [Michele.Migliore at Yale.edu];
Cavarretta, Francesco [francescocavarretta at hotmail.it];
Search NeuronDB
for information about:
Olfactory bulb main mitral GLU cell
;
Olfactory bulb main interneuron granule MC GABA cell
;
AMPA
;
NMDA
;
Gaba
;
I Na,t
;
I A
;
I K
;
Gaba
;
Glutamate
;
/
figure1eBulb3D
readme.html
ampanmda.mod
*
Other models using ampanmda.mod:
3D model of the olfactory bulb (Migliore et al. 2014)
distrt.mod
*
Other models using distrt.mod:
3D model of the olfactory bulb (Migliore et al. 2014)
Parallel odor processing by mitral and middle tufted cells in the OB (Cavarretta et al 2016, 2018)
fi.mod
*
Other models using fi.mod:
3D model of the olfactory bulb (Migliore et al. 2014)
fi_stdp.mod
*
Other models using fi_stdp.mod:
Parallel odor processing by mitral and middle tufted cells in the OB (Cavarretta et al 2016, 2018)
kamt.mod
*
Other models using kamt.mod:
3D model of the olfactory bulb (Migliore et al. 2014)
Large scale model of the olfactory bulb (Yu et al., 2013)
Olfactory bulb cluster formation (Migliore et al. 2010)
kdrmt.mod
*
Other models using kdrmt.mod:
3D model of the olfactory bulb (Migliore et al. 2014)
Large scale model of the olfactory bulb (Yu et al., 2013)
Olfactory bulb cluster formation (Migliore et al. 2010)
naxn.mod
*
Other models using naxn.mod:
3D model of the olfactory bulb (Migliore et al. 2014)
Large scale model of the olfactory bulb (Yu et al., 2013)
Olfactory bulb cluster formation (Migliore et al. 2010)
ThreshDetect.mod
*
Other models using ThreshDetect.mod:
3D model of the olfactory bulb (Migliore et al. 2014)
Large scale model of the olfactory bulb (Yu et al., 2013)
Mitral cell activity gating by respiration and inhibition in an olfactory bulb NN (Short et al 2016)
Olfactory bulb cluster formation (Migliore et al. 2010)
Parallel odor processing by mitral and middle tufted cells in the OB (Cavarretta et al 2016, 2018)
Synchrony by synapse location (McTavish et al. 2012)
.hg_archival.txt
all2all.py
*
Other models using all2all.py:
3D model of the olfactory bulb (Migliore et al. 2014)
Parallel odor processing by mitral and middle tufted cells in the OB (Cavarretta et al 2016, 2018)
balance.py
*
Other models using balance.py:
3D model of the olfactory bulb (Migliore et al. 2014)
Parallel odor processing by mitral and middle tufted cells in the OB (Cavarretta et al 2016, 2018)
bindict.py
binsave.py
binspikes.py
BulbSurf.py
catfiles.sh
colors.py
*
Other models using colors.py:
3D model of the olfactory bulb (Migliore et al. 2014)
common.py
complexity.py
*
Other models using complexity.py:
3D model of the olfactory bulb (Migliore et al. 2014)
Parallel odor processing by mitral and middle tufted cells in the OB (Cavarretta et al 2016, 2018)
custom_params.py
*
Other models using custom_params.py:
3D model of the olfactory bulb (Migliore et al. 2014)
customsim.py
destroy_model.py
*
Other models using destroy_model.py:
3D model of the olfactory bulb (Migliore et al. 2014)
determine_connections.py
distribute.py
*
Other models using distribute.py:
3D model of the olfactory bulb (Migliore et al. 2014)
Parallel odor processing by mitral and middle tufted cells in the OB (Cavarretta et al 2016, 2018)
falsegloms.txt
fixnseg.hoc
*
Other models using fixnseg.hoc:
3D model of the olfactory bulb (Migliore et al. 2014)
CA1 pyramidal neurons: binding properties and the magical number 7 (Migliore et al. 2008)
Model of CA1 activity during working memory task (Spera et al. 2016)
Parallel odor processing by mitral and middle tufted cells in the OB (Cavarretta et al 2016, 2018)
g37e1i002.py
gidfunc.py
*
Other models using gidfunc.py:
3D model of the olfactory bulb (Migliore et al. 2014)
Glom.py
*
Other models using Glom.py:
Parallel odor processing by mitral and middle tufted cells in the OB (Cavarretta et al 2016, 2018)
granule.hoc
*
Other models using granule.hoc:
3D model of the olfactory bulb (Migliore et al. 2014)
Large scale model of the olfactory bulb (Yu et al., 2013)
granules.py
grow.py
input-odors.txt
*
Other models using input-odors.txt:
3D model of the olfactory bulb (Migliore et al. 2014)
loadbalutil.py
*
Other models using loadbalutil.py:
3D model of the olfactory bulb (Migliore et al. 2014)
Parallel odor processing by mitral and middle tufted cells in the OB (Cavarretta et al 2016, 2018)
lpt.py
*
Other models using lpt.py:
3D model of the olfactory bulb (Migliore et al. 2014)
Parallel odor processing by mitral and middle tufted cells in the OB (Cavarretta et al 2016, 2018)
m2g_connections.py
mayasyn.py
mgrs.py
misc.py
mitral.hoc
*
Other models using mitral.hoc:
3D model of the olfactory bulb (Migliore et al. 2014)
mkdict.py
mkmitral.py
modeldata.py
*
Other models using modeldata.py:
3D model of the olfactory bulb (Migliore et al. 2014)
multisplit_distrib.py
*
Other models using multisplit_distrib.py:
3D model of the olfactory bulb (Migliore et al. 2014)
net_mitral_centric.py
odordisp.py
*
Other models using odordisp.py:
3D model of the olfactory bulb (Migliore et al. 2014)
odors.py
*
Other models using odors.py:
3D model of the olfactory bulb (Migliore et al. 2014)
odorstim.py
params.py
parrun.py
realgloms.txt
*
Other models using realgloms.txt:
3D model of the olfactory bulb (Migliore et al. 2014)
realSoma.py
*
Other models using realSoma.py:
Parallel odor processing by mitral and middle tufted cells in the OB (Cavarretta et al 2016, 2018)
runsim.py
spike2file.hoc
*
Other models using spike2file.hoc:
Parallel odor processing by mitral and middle tufted cells in the OB (Cavarretta et al 2016, 2018)
split.py
*
Other models using split.py:
3D model of the olfactory bulb (Migliore et al. 2014)
util.py
*
Other models using util.py:
3D model of the olfactory bulb (Migliore et al. 2014)
Parallel odor processing by mitral and middle tufted cells in the OB (Cavarretta et al 2016, 2018)
vrecord.py
weightsave.py
*
Other models using weightsave.py:
3D model of the olfactory bulb (Migliore et al. 2014)
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