Neural mass model of the sleeping thalamocortical system (Schellenberger Costa et al 2016)

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Accession:226474
This paper generates typical human EEG data of sleep stages N2/N3 as well as wakefulness and REM sleep.
References:
1 . Weigenand A, Schellenberger Costa M, Ngo HV, Claussen JC, Martinetz T (2014) Characterization of K-complexes and slow wave activity in a neural mass model. PLoS Comput Biol 10:e1003923 [PubMed]
2 . Schellenberger Costa M, Weigenand A, Ngo HV, Marshall L, Born J, Martinetz T, Claussen JC (2016) A Thalamocortical Neural Mass Model of the EEG during NREM Sleep and Its Response to Auditory Stimulation. PLoS Comput Biol 12:e1005022 [PubMed]
Model Information (Click on a link to find other models with that property)
Model Type: Neural mass;
Brain Region(s)/Organism: Thalamus; Neocortex;
Cell Type(s): Neocortex L2/3 pyramidal GLU cell; Thalamus reticular nucleus GABA cell; Thalamus geniculate nucleus/lateral principal GLU cell; Neocortex U1 L6 pyramidal corticalthalamic GLU cell; Neocortex layer 2-3 interneuron;
Channel(s): I Calcium; Na/K pump; I_K,Na;
Gap Junctions:
Receptor(s): AMPA; Gaba; NMDA;
Gene(s):
Transmitter(s):
Simulation Environment: Network; C or C++ program (web link to model); MATLAB (web link to model);
Model Concept(s): Calcium dynamics; Sleep; Activity Patterns; Oscillations; Bifurcation; Spindles; Audition;
Implementer(s): Schellenberger Costa, Michael [mschellenbergercosta at gmail.com];
Search NeuronDB for information about:  Thalamus geniculate nucleus/lateral principal GLU cell; Thalamus reticular nucleus GABA cell; Neocortex L2/3 pyramidal GLU cell; Neocortex U1 L6 pyramidal corticalthalamic GLU cell; AMPA; NMDA; Gaba; I Calcium; I_K,Na; Na/K pump;
TEMPLATE = app
CONFIG += console
CONFIG -= app_bundle
CONFIG -= qt

TARGET = release_binary

SOURCES +=  Cortical_Column.cpp \
			TC.cpp				\
			TC_mex.cpp			\
			Thalamic_Column.cpp

HEADERS +=  Cortical_Column.h	\
			Data_Storage.h		\
			ODE.h				\
			Random_Stream.h		\
			Stimulation.h		\
			Thalamic_Column.h

SOURCES -= TC_mex.cpp

QMAKE_CXXFLAGS += -std=c++11
QMAKE_CXXFLAGS_RELEASE -= -O1
QMAKE_CXXFLAGS_RELEASE -= -O2
QMAKE_CXXFLAGS_RELEASE *= -O3


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