Biophysically realistic neuron models for simulation of cortical stimulation (Aberra et al. 2018)

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Accession:241165
This archive instantiates the single-cell cortical models used in (Aberra et al. 2018) and sets up extracellular stimulation with either a point-current source, to simulate intracortical microstimulation (ICMS), or a uniform E-field distribution, with a monophasic, rectangular pulse waveform in both cases.
Reference:
1 . Aberra AS, Peterchev AV, Grill WM (2018) Biophysically realistic neuron models for simulation of cortical stimulation. J Neural Eng 15:066023 [PubMed]
Model Information (Click on a link to find other models with that property)
Model Type: Neuron or other electrically excitable cell; Axon;
Brain Region(s)/Organism: Neocortex; Barrel cortex;
Cell Type(s): Myelinated neuron;
Channel(s):
Gap Junctions:
Receptor(s):
Gene(s):
Transmitter(s):
Simulation Environment: NEURON;
Model Concept(s): Action Potential Initiation; Detailed Neuronal Models;
Implementer(s): Aberra, Aman [aman.aberra at duke.edu];
/*
* $Id: anatscale.hoc,v 1.2 2005/09/10 23:02:15 ted Exp $
* set up xyz scale bars
* 2018/05/20 Modified by Aman Aberra
*/

create xScale, yScale, zScale
proc anatscale() {
	create xScale, yScale, zScale
	if ($4>0) {  // if length arg is <= 0 then do nothing
		xScale {
			pt3dclear()
			pt3dadd($1, $2, $3, 1)
			pt3dadd($1+$4, $2, $3, 1)
		}
		yScale {
			pt3dclear()
			pt3dadd($1, $2, $3, 1)
			pt3dadd($1, $2+$4, $3, 1)
		}
		zScale {
			pt3dclear()
			pt3dadd($1, $2, $3, 1)
			pt3dadd($1, $2, $3+$4, 1)
		}
	}
}

//anatscale(400,0,0,250)  // origin xyz and length

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