Biophysically realistic neuron models for simulation of cortical stimulation (Aberra et al. 2018)

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Accession:241165
This archive instantiates the single-cell cortical models used in (Aberra et al. 2018) and sets up extracellular stimulation with either a point-current source, to simulate intracortical microstimulation (ICMS), or a uniform E-field distribution, with a monophasic, rectangular pulse waveform in both cases.
Reference:
1 . Aberra AS, Peterchev AV, Grill WM (2018) Biophysically realistic neuron models for simulation of cortical stimulation. J Neural Eng 15:066023 [PubMed]
Model Information (Click on a link to find other models with that property)
Model Type: Neuron or other electrically excitable cell; Axon;
Brain Region(s)/Organism: Neocortex; Barrel cortex;
Cell Type(s): Myelinated neuron;
Channel(s):
Gap Junctions:
Receptor(s):
Gene(s):
Transmitter(s):
Simulation Environment: NEURON;
Model Concept(s): Action Potential Initiation; Detailed Neuronal Models;
Implementer(s): Aberra, Aman [aman.aberra at duke.edu];
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AberraEtAl2018
cells
L6_TPC_L4_cADpyr231_2
hoc_recordings
mechanisms
morphology
python_recordings
synapses
README *
.provenance.json
biophysics.hoc *
cellinfo.json
CHANGELOG *
constants.hoc *
creategui.hoc *
createsimulation.hoc
current_amps.dat
init.hoc *
LICENSE *
morphology.hoc
mosinit.hoc *
ringplot.hoc *
run.py
run_hoc.sh *
run_py.sh *
run_RmpRiTau.py
run_RmpRiTau_py.sh *
template.hoc
VERSION *
                            
{
    "cell name": "cADpyr231_L6_TPC_L4_6_dend-tkb061126a4_ch0_cc2_h_zk_60x_1_axon-tkb061126a4_ch0_cc2_h_zk_60x_1_-_Clone_5",
    "e-type": "L6PC",
    "gid": "26443",
    "layer": "L6",
    "m-type": "L6_TPC_L4",
    "me-type": "L6_TPC_L4_L6PC",
    "morphology": "dend-tkb061126a4_ch0_cc2_h_zk_60x_1_axon-tkb061126a4_ch0_cc2_h_zk_60x_1_-_Clone_5"
}

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