Advanced search
SenseLab
SimToolDB
ModelDB Help
User account
Login
Register
Find models by
Model name
First author
Each author
Region(circuits)
Find models for
Cell type
Current
Receptor
Gene
Transmitters
Concept
Simulators
Methods
Find models of
Realistic Networks
Neurons
Electrical synapses (gap junctions)
Chemical synapses
Ion channels
Neuromuscular junctions
Axons
Pathophysiology
Other resources
SenseLab mailing list
ModelDB related resources
Computational neuroscience ecosystem
Models in a git repository
ModelDB is moving. Check out our new site at
https://modeldb.science
.
The corresponding page is
https://modeldb.science/116862
.
Thalamic interneuron multicompartment model (Zhu et al. 1999)
 
Download zip file
Help downloading and running models
Model Information
Model File
Citations
Model Views
Versions on GitHub
Accession:
116862
This is an attempt to recreate a set of simulations originally performed in 1994 under NEURON version 3 and last tested in 1999. When I ran it now it did not behave exactly the same as previously which I suspect is due to some minor mod file changes on my side rather than due to any differences among versions. After playing around with the parameters a little bit I was able to get something that looks generally like a physiological trace in J Neurophysiol, 81:702--711, 1999, fig. 8b top trace. This sad preface is simply offered in order to encourage anyone who is interested in this model to make and post fixes. I'm happy to help out. Simulation by JJ Zhu To run nrnivmodl nrngui.hoc
References:
1 .
Zhu JJ, Uhlrich DJ, Lytton WW (1999) Burst firing in identified rat geniculate interneurons.
Neuroscience
91
:1445-60
[
PubMed
]
2 .
Zhu JJ, Lytton WW, Xue JT, Uhlrich DJ (1999) An intrinsic oscillation in interneurons of the rat lateral geniculate nucleus.
J Neurophysiol
81
:702-11
[
PubMed
]
Model Information
(Click on a link to find other models with that property)
Model Type:
Neuron or other electrically excitable cell;
Brain Region(s)/Organism:
Thalamus;
Cell Type(s):
Channel(s):
I Na,t;
I L high threshold;
I T low threshold;
I K,leak;
I h;
I K,Ca;
I CAN;
Gap Junctions:
Receptor(s):
Gene(s):
Transmitter(s):
Simulation Environment:
NEURON;
Model Concept(s):
Bursting;
Oscillations;
Implementer(s):
Zhu, J. Julius [jjzhu at virginia.edu];
Search NeuronDB
for information about:
I Na,t
;
I L high threshold
;
I T low threshold
;
I K,leak
;
I h
;
I K,Ca
;
I CAN
;
Download the displayed file
/
b09jan13
readme.html
AMPA.mod
cadecay.mod
clampex.mod
*
Other models using clampex.mod:
Synaptic information transfer in computer models of neocortical columns (Neymotin et al. 2010)
cp.mod
*
Other models using cp.mod:
Synaptic information transfer in computer models of neocortical columns (Neymotin et al. 2010)
cp2.mod
*
Other models using cp2.mod:
Synaptic information transfer in computer models of neocortical columns (Neymotin et al. 2010)
GABAA.mod
GABAB.mod
HH2.mod
*
Other models using HH2.mod:
Thalamocortical augmenting response (Bazhenov et al 1998)
Iahp.mod
*
Other models using Iahp.mod:
Synaptic information transfer in computer models of neocortical columns (Neymotin et al. 2010)
Thalamocortical augmenting response (Bazhenov et al 1998)
Ican.mod
*
Other models using Ican.mod:
Synaptic information transfer in computer models of neocortical columns (Neymotin et al. 2010)
Thalamocortical augmenting response (Bazhenov et al 1998)
Ih.mod
*
Other models using Ih.mod:
Thalamocortical augmenting response (Bazhenov et al 1998)
IL.mod
IL3.mod
*
Other models using IL3.mod:
Synaptic information transfer in computer models of neocortical columns (Neymotin et al. 2010)
IT.mod
*
Other models using IT.mod:
Thalamocortical augmenting response (Bazhenov et al 1998)
IT2.mod
*
Other models using IT2.mod:
Thalamocortical augmenting response (Bazhenov et al 1998)
kdr2.mod
*
Other models using kdr2.mod:
Synaptic information transfer in computer models of neocortical columns (Neymotin et al. 2010)
kleak.mod
*
Other models using kleak.mod:
Thalamocortical augmenting response (Bazhenov et al 1998)
kmbg.mod
naf2.mod
*
Other models using naf2.mod:
Synaptic information transfer in computer models of neocortical columns (Neymotin et al. 2010)
nap.mod
*
Other models using nap.mod:
Synaptic information transfer in computer models of neocortical columns (Neymotin et al. 2010)
NMDA.mod
nthh.mod
*
Other models using nthh.mod:
Synaptic information transfer in computer models of neocortical columns (Neymotin et al. 2010)
ntIh.mod
*
Other models using ntIh.mod:
Synaptic information transfer in computer models of neocortical columns (Neymotin et al. 2010)
ntleak.mod
ntt.mod
*
Other models using ntt.mod:
Synaptic information transfer in computer models of neocortical columns (Neymotin et al. 2010)
pregencv.mod
vecst.mod
batch_.hoc
bg_cvode.inc
misc.h
mosinit.hoc
*
Other models using mosinit.hoc:
Thalamocortical augmenting response (Bazhenov et al 1998)
netcon.inc
screenshot.jpg
load_file("nrngui.hoc") load_file("batch_.hoc")
Load Model View
Loading data, please wait...