Gap junction coupled network of striatal fast spiking interneurons (Hjorth et al. 2009)

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Accession:118389
Gap junctions between striatal FS neurons has very weak ability to synchronise spiking. Input uncorrelated between neighbouring neurons is shunted, while correlated input is not.
Reference:
1 . Hjorth J, Blackwell KT, Kotaleski JH (2009) Gap junctions between striatal fast-spiking interneurons regulate spiking activity and synchronization as a function of cortical activity. J Neurosci 29:5276-86 [PubMed]
Model Information (Click on a link to find other models with that property)
Model Type: Realistic Network; Neuron or other electrically excitable cell; Synapse; Channel/Receptor; Dendrite;
Brain Region(s)/Organism: Basal ganglia;
Cell Type(s): Neostriatum fast spiking interneuron;
Channel(s): I A; I_K,Na;
Gap Junctions: Gap junctions;
Receptor(s):
Gene(s):
Transmitter(s): Gaba; Glutamate;
Simulation Environment: GENESIS; MATLAB;
Model Concept(s): Activity Patterns; Ion Channel Kinetics; Synchronization; Detailed Neuronal Models;
Implementer(s): Hjorth, Johannes [hjorth at csc.kth.se];
Search NeuronDB for information about:  I A; I_K,Na; Gaba; Glutamate;
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FSGJ_Hjorth2009
matlabScripts
checkAllEqual.m *
correlationByDuplicationOfSpikes.m
correlationByJitteringOfSpikes.m
countSpikesWithNumNeighbourSpikes.m
findSpikes.m *
gaussJitterInputKeepCorr.m
makeAllExternalInputAllUpstate.m
makeDaughterInsignal.m
makeDaughterNoise.m *
makeFSconnectionMatrixOnlyPrimWrappedSetNGJ.m
makeFSconnectionMatrixOnlySecWrappedSetNGJ.m
makeFSMorph.m
makeFSrandomNetwork.m *
makeInputWithCorrShift.m
makeInputWithCorrShift125center.m
makeSCCCplot.m
makeTrainInsignal.m
makeTrainNoise.m *
mixTwoTrainsKeepCorr.m
poissonMaxTime.m *
showFSnetwork.m
writeCurrentInputInfo.m
writeInput.m *
writeParameters.m
                            
function writeParameters(maxTime, numCells, ...
                         gapSource, gapDest, gapRes, ...
                         outputFile)
                     
                     
%if(length(gapSource) ~= length(gapDest) | length(gapDest) ~= length(gapRes))
if(length(gapSource) ~= length(gapDest) | ...
        (length(gapDest) ~= length(gapRes)) & gapRes(1) ~= inf)
    disp('writeParameters: gapSource and gapDest has different lengths');
    keyboard
end
   

fid = fopen([pwd '/INDATA/parameters.txt'], 'w');

fprintf(fid, '%s\n', outputFile);

fprintf(fid, '%f\n', maxTime);
fprintf(fid, '%d\n', numCells);

fprintf(fid, '%d\n', length(gapSource));

for i=1:length(gapSource)
   fprintf(fid, '%s %s %f\n', gapSource{i}, gapDest{i}, gapRes(i));
end

fclose(fid);

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