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Parametric computation and persistent gamma in a cortical model (Chambers et al. 2012)
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Model Information
Model File
Citations
Accession:
144579
Using the Traub et al (2005) model of the cortex we determined how 33 synaptic strength parameters control gamma oscillations. We used fractional factorial design to reduce the number of runs required to 4096. We found an expected multiplicative interaction between parameters.
Reference:
1 .
Chambers JD, Bethwaite B, Diamond NT, Peachey T, Abramson D, Petrou S, Thomas EA (2012) Parametric computation predicts a multiplicative interaction between synaptic strength parameters that control gamma oscillations.
Front Comput Neurosci
6
:53
[
PubMed
]
Model Information
(Click on a link to find other models with that property)
Model Type:
Realistic Network;
Axon;
Synapse;
Channel/Receptor;
Dendrite;
Brain Region(s)/Organism:
Cell Type(s):
Neocortex L5/6 pyramidal GLU cell;
Neocortex L2/3 pyramidal GLU cell;
Neocortex V1 interneuron basket PV GABA cell;
Neocortex fast spiking (FS) interneuron;
Neocortex spiny stellate cell;
Neocortex spiking regular (RS) neuron;
Neocortex spiking low threshold (LTS) neuron;
Channel(s):
I A;
I K;
I K,leak;
I K,Ca;
I Calcium;
I_K,Na;
Gap Junctions:
Gap junctions;
Receptor(s):
GabaA;
AMPA;
NMDA;
Gene(s):
Transmitter(s):
Gaba;
Glutamate;
Simulation Environment:
NEURON;
Model Concept(s):
Oscillations;
Parameter sensitivity;
Implementer(s):
Thomas, Evan [evan at evan-thomas.net];
Chambers, Jordan [jordandchambers at gmail.com];
Search NeuronDB
for information about:
Neocortex L5/6 pyramidal GLU cell
;
Neocortex L2/3 pyramidal GLU cell
;
Neocortex V1 interneuron basket PV GABA cell
;
GabaA
;
AMPA
;
NMDA
;
I A
;
I K
;
I K,leak
;
I K,Ca
;
I Calcium
;
I_K,Na
;
Gaba
;
Glutamate
;
/
FRBGamma
mod
alphasyndiffeq.mod
*
Other models using alphasyndiffeq.mod:
A single column thalamocortical network model (Traub et al 2005)
Deconstruction of cortical evoked potentials generated by subthalamic DBS (Kumaravelu et al 2018)
alphasynkin.mod
*
Other models using alphasynkin.mod:
A single column thalamocortical network model (Traub et al 2005)
Cell splitting in neural networks extends strong scaling (Hines et al. 2008)
Deconstruction of cortical evoked potentials generated by subthalamic DBS (Kumaravelu et al 2018)
alphasynkint.mod
*
Other models using alphasynkint.mod:
A single column thalamocortical network model (Traub et al 2005)
Cell splitting in neural networks extends strong scaling (Hines et al. 2008)
Deconstruction of cortical evoked potentials generated by subthalamic DBS (Kumaravelu et al 2018)
ampa.mod
*
Other models using ampa.mod:
A single column thalamocortical network model (Traub et al 2005)
Deconstruction of cortical evoked potentials generated by subthalamic DBS (Kumaravelu et al 2018)
ar.mod
*
Other models using ar.mod:
A single column thalamocortical network model (Traub et al 2005)
Cell splitting in neural networks extends strong scaling (Hines et al. 2008)
Deconstruction of cortical evoked potentials generated by subthalamic DBS (Kumaravelu et al 2018)
cad.mod
*
Other models using cad.mod:
A single column thalamocortical network model (Traub et al 2005)
CA1 pyramidal cell: reconstructed axonal arbor and failures at weak gap junctions (Vladimirov 2011)
Cell splitting in neural networks extends strong scaling (Hines et al. 2008)
Deconstruction of cortical evoked potentials generated by subthalamic DBS (Kumaravelu et al 2018)
cal.mod
*
Other models using cal.mod:
A single column thalamocortical network model (Traub et al 2005)
CA1 pyramidal cell: reconstructed axonal arbor and failures at weak gap junctions (Vladimirov 2011)
Cell splitting in neural networks extends strong scaling (Hines et al. 2008)
Deconstruction of cortical evoked potentials generated by subthalamic DBS (Kumaravelu et al 2018)
cat.mod
*
Other models using cat.mod:
A single column thalamocortical network model (Traub et al 2005)
Cell splitting in neural networks extends strong scaling (Hines et al. 2008)
Deconstruction of cortical evoked potentials generated by subthalamic DBS (Kumaravelu et al 2018)
cat_a.mod
*
Other models using cat_a.mod:
A single column thalamocortical network model (Traub et al 2005)
Cell splitting in neural networks extends strong scaling (Hines et al. 2008)
Deconstruction of cortical evoked potentials generated by subthalamic DBS (Kumaravelu et al 2018)
gabaa.mod
*
Other models using gabaa.mod:
A single column thalamocortical network model (Traub et al 2005)
Deconstruction of cortical evoked potentials generated by subthalamic DBS (Kumaravelu et al 2018)
Dendro-dendritic synaptic circuit (Shepherd Brayton 1979)
iclamp_const.mod
*
Other models using iclamp_const.mod:
A single column thalamocortical network model (Traub et al 2005)
Cell splitting in neural networks extends strong scaling (Hines et al. 2008)
Deconstruction of cortical evoked potentials generated by subthalamic DBS (Kumaravelu et al 2018)
k2.mod
*
Other models using k2.mod:
A single column thalamocortical network model (Traub et al 2005)
Cell splitting in neural networks extends strong scaling (Hines et al. 2008)
Deconstruction of cortical evoked potentials generated by subthalamic DBS (Kumaravelu et al 2018)
Neocort. pyramidal cells subthreshold somatic voltage controls spike propagation (Munro Kopell 2012)
ka.mod
*
Other models using ka.mod:
A single column thalamocortical network model (Traub et al 2005)
CA1 pyramidal cell: reconstructed axonal arbor and failures at weak gap junctions (Vladimirov 2011)
Cell splitting in neural networks extends strong scaling (Hines et al. 2008)
Deconstruction of cortical evoked potentials generated by subthalamic DBS (Kumaravelu et al 2018)
Neocort. pyramidal cells subthreshold somatic voltage controls spike propagation (Munro Kopell 2012)
ka_ib.mod
*
Other models using ka_ib.mod:
A single column thalamocortical network model (Traub et al 2005)
Cell splitting in neural networks extends strong scaling (Hines et al. 2008)
Deconstruction of cortical evoked potentials generated by subthalamic DBS (Kumaravelu et al 2018)
kahp.mod
*
Other models using kahp.mod:
A single column thalamocortical network model (Traub et al 2005)
CA1 pyramidal cell: reconstructed axonal arbor and failures at weak gap junctions (Vladimirov 2011)
Cell splitting in neural networks extends strong scaling (Hines et al. 2008)
Deconstruction of cortical evoked potentials generated by subthalamic DBS (Kumaravelu et al 2018)
kahp_deeppyr.mod
*
Other models using kahp_deeppyr.mod:
A single column thalamocortical network model (Traub et al 2005)
Cell splitting in neural networks extends strong scaling (Hines et al. 2008)
Deconstruction of cortical evoked potentials generated by subthalamic DBS (Kumaravelu et al 2018)
kahp_slower.mod
*
Other models using kahp_slower.mod:
A single column thalamocortical network model (Traub et al 2005)
Cell splitting in neural networks extends strong scaling (Hines et al. 2008)
Deconstruction of cortical evoked potentials generated by subthalamic DBS (Kumaravelu et al 2018)
kc.mod
*
Other models using kc.mod:
A single column thalamocortical network model (Traub et al 2005)
CA1 pyramidal cell: reconstructed axonal arbor and failures at weak gap junctions (Vladimirov 2011)
Cell splitting in neural networks extends strong scaling (Hines et al. 2008)
Deconstruction of cortical evoked potentials generated by subthalamic DBS (Kumaravelu et al 2018)
kc_fast.mod
*
Other models using kc_fast.mod:
A single column thalamocortical network model (Traub et al 2005)
Cell splitting in neural networks extends strong scaling (Hines et al. 2008)
Deconstruction of cortical evoked potentials generated by subthalamic DBS (Kumaravelu et al 2018)
kdr.mod
*
Other models using kdr.mod:
A single column thalamocortical network model (Traub et al 2005)
CA1 pyramidal cell: reconstructed axonal arbor and failures at weak gap junctions (Vladimirov 2011)
Cell splitting in neural networks extends strong scaling (Hines et al. 2008)
Deconstruction of cortical evoked potentials generated by subthalamic DBS (Kumaravelu et al 2018)
kdr_fs.mod
*
Other models using kdr_fs.mod:
A single column thalamocortical network model (Traub et al 2005)
Cell splitting in neural networks extends strong scaling (Hines et al. 2008)
Deconstruction of cortical evoked potentials generated by subthalamic DBS (Kumaravelu et al 2018)
km.mod
*
Other models using km.mod:
A single column thalamocortical network model (Traub et al 2005)
CA1 pyramidal cell: reconstructed axonal arbor and failures at weak gap junctions (Vladimirov 2011)
Cell splitting in neural networks extends strong scaling (Hines et al. 2008)
Deconstruction of cortical evoked potentials generated by subthalamic DBS (Kumaravelu et al 2018)
naf.mod
naf_tcr.mod
*
Other models using naf_tcr.mod:
A single column thalamocortical network model (Traub et al 2005)
Deconstruction of cortical evoked potentials generated by subthalamic DBS (Kumaravelu et al 2018)
naf2.mod
nap.mod
napf.mod
*
Other models using napf.mod:
A single column thalamocortical network model (Traub et al 2005)
Cell splitting in neural networks extends strong scaling (Hines et al. 2008)
Deconstruction of cortical evoked potentials generated by subthalamic DBS (Kumaravelu et al 2018)
napf_spinstell.mod
*
Other models using napf_spinstell.mod:
A single column thalamocortical network model (Traub et al 2005)
Cell splitting in neural networks extends strong scaling (Hines et al. 2008)
Deconstruction of cortical evoked potentials generated by subthalamic DBS (Kumaravelu et al 2018)
napf_tcr.mod
*
Other models using napf_tcr.mod:
A single column thalamocortical network model (Traub et al 2005)
Cell splitting in neural networks extends strong scaling (Hines et al. 2008)
Deconstruction of cortical evoked potentials generated by subthalamic DBS (Kumaravelu et al 2018)
par_ggap.mod
*
Other models using par_ggap.mod:
A single column thalamocortical network model (Traub et al 2005)
Cell splitting in neural networks extends strong scaling (Hines et al. 2008)
pulsesyn.mod
*
Other models using pulsesyn.mod:
A single column thalamocortical network model (Traub et al 2005)
Cell splitting in neural networks extends strong scaling (Hines et al. 2008)
Deconstruction of cortical evoked potentials generated by subthalamic DBS (Kumaravelu et al 2018)
rampsyn.mod
*
Other models using rampsyn.mod:
A single column thalamocortical network model (Traub et al 2005)
Cell splitting in neural networks extends strong scaling (Hines et al. 2008)
Deconstruction of cortical evoked potentials generated by subthalamic DBS (Kumaravelu et al 2018)
rand.mod
*
Other models using rand.mod:
A single column thalamocortical network model (Traub et al 2005)
Cell splitting in neural networks extends strong scaling (Hines et al. 2008)
Deconstruction of cortical evoked potentials generated by subthalamic DBS (Kumaravelu et al 2018)
ri.mod
traub_nmda.mod
*
Other models using traub_nmda.mod:
A single column thalamocortical network model (Traub et al 2005)
Deconstruction of cortical evoked potentials generated by subthalamic DBS (Kumaravelu et al 2018)
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