//genesis
//nmda_channel.g
function make_NMDA_channel (chanpath, Ek, KMg, tau2, gmax, ghk, depr, deprtau)
str chanpath //what you want the channel to be called (full path)
float KMg, tau2, gmax //parameters that differ between NR2A, B, C and D subunits
float depr
float deprtau
float Ek
int ghk
float tau1 = (4.4624e-3)/2 //(5.63e-3)/8 //(4.4624e-3)/2 // DE Chapman et al 2003, table 1 (5.63ms: wolf) w/qfact of 2
//is (4.4624e-3)/2 in Evans et al., 2012
float CMg = 1.4 // [Mg] in mM //Kerr and Plenz uses 1.4mM Mg
float eta = 1/3.57 // Kmg = 1/eta, (per mM) overwritten by synparams, 3.57 old, 18 new
float gamma = 99 //99 new //62 old // per Volt
echo "XXX make_NMDA_channel, chanpath = "{chanpath} "caBuffer = "{Ek} "KMg = "{KMg} "tau2 = "{tau2}
make_synaptic_channel {chanpath} {tau1} {tau2} {gmax} {Ek} {depr} {deprtau}
//the kinetics of the magnesium block is different for different subunits.
// NR2A and B are about the same, but C and D are much less affected by the block.
//these numbers were used because the made the magnesium block curve fit the figures by Moyner et al (1994 figure 7) best by eye.
create Mg_block {chanpath}/block
setfield {chanpath}/block CMg {CMg}
setfield {chanpath}/block KMg_B {1.0/{gamma}}
setfield {chanpath}/block KMg_A {KMg}
addmsg {chanpath} {chanpath}/block CHANNEL Gk Ek
if (ghk==1) //GHK_yesno is set in Synparams.g
create ghk {chanpath}/GHK
setfield {chanpath}/GHK Cout 2 // Carter & Sabatini 2004 uses 2mM, Wolf 5mM
setfield {chanpath}/GHK valency 2.0
setfield {chanpath}/GHK T {TEMPERATURE}
//need to scale the NMDA current according to GHK kluge factor and calcium permeability
create diffamp {chanpath}/CaCurr
setfield {chanpath}/CaCurr gain {NMDAfactGHK} saturation 1.0
addmsg {chanpath}/block {chanpath}/CaCurr PLUS Gk
addmsg {chanpath}/CaCurr {chanpath}/GHK PERMEABILITY output
end
end
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