// genesis
// Setting the axonal propagation velocity
float CABLE_VEL = 1 // scale factor = 1/(cable velocity) sec/meter
float destlim = {C5FS_P23FRBa_destlim}
/*
* Usage :
* planarconnect source-path destination-path
* [-relative]
* [-sourcemask {box,ellipse} x1 y1 x2 y2]
* [-sourcehole {box,ellipse} x1 y1 x2 y2]
* [-destmask {box,ellipse} x1 y1 x2 y2]
* [-desthole {box,ellipse} x1 y1 x2 y2]
* [-probability p]
*/
echo Making connections from the C5FS cells to the P23FRBa cells.
// C5FS - P23FRBa GABAa
rvolumeconnect /C5FSnet/C5FS[]/soma/spk16 \
/P23FRBanet/P23FRBa[]/axona/Inh_ch22C5FSGABAa@all \
-relative \
-sourcemask box -1 -1 -1 1 1 1 \
-destmask box -{destlim} -{destlim} -1 {destlim} {destlim} 1 \
-probability 1.0*{C5FS_P23FRBa_prob}
echo Setting weights and delays for C5FS->P23FRBa connections.
// assigning delays using the planardelay function
/*
* Usage :
* planardelay path
* [-fixed delay]
* [-radial propagation_velocity]
* [-uniform range] (not used here)
* [-gaussian sd max] (not used here)
* [-exp mid max] (not used here)
* [-absoluterandom] (not used here)
*/
rvolumedelay /C5FSnet/C5FS[]/soma/spk16 -radial {C5FS_P23FRBa_axdelayCV} -add -gaussian {C5FS_P23FRBa_axdelaystdev} {C5FS_P23FRBa_axdelaymaxdev}
//C5FS - P23FRBa GABAa
syndelay /P23FRBanet/P23FRBa[]/axona/Inh_ch22C5FSGABAa {C5FS_P23FRBa_syndelay} -add -gaussian {C5FS_P23FRBa_syndelaystdev} {C5FS_P23FRBa_syndelaymaxdev}
// assigning weights using the planarweight function
/*
* Usage :
* planarweight sourcepath
* [-fixed weight]
* [-decay decay_rate max_weight min_weight]
* [-uniform range]
* [-gaussian sd max]
* [-exponential mid max]
* [-absoluterandom]
*/
rvolumeweight /C5FSnet/C5FS[]/soma/spk16 -decay {C5FSdecayrate} {C5FSmaxwgt} {C5FSminwgt}
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