A multilayer cortical model to study seizure propagation across microdomains (Basu et al. 2015)

 Download zip file 
Help downloading and running models
Accession:206238
A realistic neural network was used to simulate a region of neocortex to obtain extracellular LFPs from ‘virtual micro-electrodes’ and produce test data for comparison with multisite microelectrode recordings. A model was implemented in the GENESIS neurosimulator. A simulated region of cortex was represented by layers 2/3, 5/6 (interneurons and pyramidal cells) and layer 4 stelate cells, spaced at 25 µm in each horizontal direction. Pyramidal cells received AMPA and NMDA inputs from neighboring cells at the basal and apical dendrites. The LFP data was generated by simulating 16-site electrode array with the help of ‘efield’ objects arranged at the predetermined positions with respect to the surface of the simulated network. The LFP for the model is derived from a weighted average of the current sources summed over all cellular compartments. Cell models were taken from from Traub et al. (2005) J Neurophysiol 93(4):2194-232.
References:
1 . Basu I, Kudela P, Korzeniewska A, Franaszczuk PJ, Anderson WS (2015) A study of the dynamics of seizure propagation across micro domains in the vicinity of the seizure onset zone. J Neural Eng 12:046016 [PubMed]
2 . Basu I, Kudela P, Anderson WS (2014) Determination of seizure propagation across microdomains using spectral measures of causality. Conf Proc IEEE Eng Med Biol Soc 2014:6349-52 [PubMed]
Model Information (Click on a link to find other models with that property)
Model Type: Realistic Network;
Brain Region(s)/Organism: Neocortex;
Cell Type(s): Neocortex U1 L2/6 pyramidal intratelencephalic GLU cell; Neocortex U1 L5B pyramidal pyramidal tract GLU cell; Thalamus reticular nucleus GABA cell; Neocortex spiking low threshold (LTS) neuron; Neocortex spiking regular (RS) neuron; Neocortex layer 2-3 interneuron; Neocortex layer 5 interneuron;
Channel(s): I Na,p; I Na,t; I K; I A; I M; I h; I K,Ca; I A, slow; I L high threshold; I T low threshold; I Calcium;
Gap Junctions: Gap junctions;
Receptor(s): AMPA; GabaA; NMDA;
Gene(s):
Transmitter(s): Glutamate; Gaba; Amino Acids;
Simulation Environment: GENESIS;
Model Concept(s): Activity Patterns; Epilepsy;
Implementer(s): Anderson, WS ; Kudela, Pawel ;
Search NeuronDB for information about:  Thalamus reticular nucleus GABA cell; Neocortex U1 L5B pyramidal pyramidal tract GLU cell; Neocortex U1 L2/6 pyramidal intratelencephalic GLU cell; GabaA; AMPA; NMDA; I Na,p; I Na,t; I L high threshold; I T low threshold; I A; I K; I M; I h; I K,Ca; I Calcium; I A, slow; Amino Acids; Gaba; Glutamate;
/
BasuEtAl2015
axonaldelays.g
B23FS.g
B23FS_B23FS.g
B23FS_B23FS_Gap.g
B23FS_B23FS_TraubGap.g
B23FS_C23FS.g
B23FS_I23LTS.g
B23FS_P23FRBa.g
B23FS_P23RSa.g
B23FS_P23RSb.g
B23FS_P23RSc.g
B23FS_P23RSd.g
B23FS_raninput.g
B23FS_ST4RS.g
B23FS_synapsedefs.g
B23FScell3Dpk.p
B23FSchanpk.g
B23FSprotodefs.g
B23FSsyncond.g
B5FS.g
B5FS_B5FS.g
B5FS_B5FS_Gap.g
B5FS_B5FS_TraubGap.g
B5FS_C5FS.g
B5FS_I5LTS.g
B5FS_P5IBa.g
B5FS_P5IBb.g
B5FS_P5IBc.g
B5FS_P5IBd.g
B5FS_P5RSa.g
B5FS_P6RSa.g
B5FS_P6RSb.g
B5FS_P6RSc.g
B5FS_P6RSd.g
B5FS_raninput.g
B5FS_ST4RS.g
B5FS_synapsedefs.g
B5FScell3Dpk.p
B5FSchanpk.g
B5FSprotodefs.g
B5FSsyncond.g
BinarySpikeClasswrite.g
C23FS.g
C23FS_P23FRBa.g
C23FS_P23RSa.g
C23FS_P23RSb.g
C23FS_P23RSc.g
C23FS_P23RSd.g
C23FS_P5IBa.g
C23FS_P5IBb.g
C23FS_P5IBc.g
C23FS_P5IBd.g
C23FS_P5RSa.g
C23FS_P6RSa.g
C23FS_P6RSb.g
C23FS_P6RSc.g
C23FS_P6RSd.g
C23FS_raninput.g
C23FS_ST4RS.g
C23FS_synapsedefs.g
C23FScell3Dpk.p
C23FSchanpk.g
C23FSprotodefs.g
C23FSsyncond.g
C5FS.g
C5FS_P23FRBa.g
C5FS_P23RSa.g
C5FS_P23RSb.g
C5FS_P23RSc.g
C5FS_P23RSd.g
C5FS_P5IBa.g
C5FS_P5IBb.g
C5FS_P5IBc.g
C5FS_P5IBd.g
C5FS_P5RSa.g
C5FS_P6RSa.g
C5FS_P6RSb.g
C5FS_P6RSc.g
C5FS_P6RSd.g
C5FS_raninput.g
C5FS_ST4RS.g
C5FS_synapsedefs.g
C5FScell3Dpk.p
C5FSchanpk.g
C5FSprotodefs.g
C5FSsyncond.g
celldefs.g
compartments.g *
constants.g
Gapdefs.g
GenrrunIshita
hosts144
hosts81
I23LTS.g
I23LTS_B23FS.g
I23LTS_B5FS.g
I23LTS_C23FS.g
I23LTS_C5FS.g
I23LTS_I23LTS.g
I23LTS_I23LTS_Gap.g
I23LTS_I23LTS_TraubGap.g
I23LTS_I5LTS.g
I23LTS_P23FRBa.g
I23LTS_P23RSa.g
I23LTS_P23RSb.g
I23LTS_P23RSc.g
I23LTS_P23RSd.g
I23LTS_P5IBa.g
I23LTS_P5IBb.g
I23LTS_P5IBc.g
I23LTS_P5IBd.g
I23LTS_P5RSa.g
I23LTS_P6RSa.g
I23LTS_P6RSb.g
I23LTS_P6RSc.g
I23LTS_P6RSd.g
I23LTS_raninput.g
I23LTS_ST4RS.g
I23LTS_synapsedefs.g
I23LTScell3Dpk.p
I23LTSchanpk.g
I23LTSprotodefs.g
I23LTSsyncond.g
I5LTS.g
I5LTS_B23FS.g
I5LTS_B5FS.g
I5LTS_C23FS.g
I5LTS_C5FS.g
I5LTS_I23LTS.g
I5LTS_I5LTS.g
I5LTS_I5LTS_Gap.g
I5LTS_I5LTS_TraubGap.g
I5LTS_P23FRBa.g
I5LTS_P23RSa.g
I5LTS_P23RSb.g
I5LTS_P23RSc.g
I5LTS_P23RSd.g
I5LTS_P5IBa.g
I5LTS_P5IBb.g
I5LTS_P5IBc.g
I5LTS_P5IBd.g
I5LTS_P5RSa.g
I5LTS_P6RSa.g
I5LTS_P6RSb.g
I5LTS_P6RSc.g
I5LTS_P6RSd.g
I5LTS_raninput.g
I5LTS_ST4RS.g
I5LTS_synapsedefs.g
I5LTScell3Dpk.p
I5LTSchanpk.g
I5LTSprotodefs.g
I5LTSsyncond.g
icons.g *
LFP16s.g
LFP8s.g
LFP8sASCIIwrite.g
LFPlist
LFPmultiarray.g
LFPmultiarrayASCIIwrite.g
ModelDescription.pdf
mvapich2_pgenesis_command
Neocortex.g
Neosyn_utils.g
netdefs.g
netparams.g
nodes
nodes4
nRT.g
nRT_nRT.g
nRT_nRT_Gap.g
nRT_nRT_TraubGap.g
nRT_raninput.g
nRT_synapsedefs.g
nRT_TCR.g
nRTcellpk.p
nRTchanpk.g
nRTprotodefs.g
nRTsyncond.g
nxpgenesis.out
orient_sim.g
P23FRBa.g
P23FRBa_B23FS.g
P23FRBa_B5FS.g
P23FRBa_C23FS.g
P23FRBa_C5FS.g
P23FRBa_I23LTS.g
P23FRBa_I5LTS.g
P23FRBa_P23FRBa.g
P23FRBa_P23FRBa_Gap.g
P23FRBa_P23RSa.g
P23FRBa_P23RSb.g
P23FRBa_P23RSc.g
P23FRBa_P23RSd.g
P23FRBa_P5IBa.g
P23FRBa_P5IBb.g
P23FRBa_P5IBc.g
P23FRBa_P5IBd.g
P23FRBa_P5RSa.g
P23FRBa_P6RSa.g
P23FRBa_P6RSb.g
P23FRBa_P6RSc.g
P23FRBa_P6RSd.g
P23FRBa_raninput.g
P23FRBa_ST4RS.g
P23FRBa_synapsedefs.g
P23FRBacell3Dpk.p
P23FRBachanpk.g
P23FRBaprotodefs.g
P23RSa.g
P23RSa_B23FS.g
P23RSa_B5FS.g
P23RSa_C23FS.g
P23RSa_C5FS.g
P23RSa_I23LTS.g
P23RSa_I5LTS.g
P23RSa_output.g
P23RSa_P23FRBa.g
P23RSa_P23FRBa_Gap.g
P23RSa_P23FRBa_TraubGap.g
P23RSa_P23RSa.g
P23RSa_P23RSa_Gap.g
P23RSa_P23RSb.g
P23RSa_P23RSb_Gap.g
P23RSa_P23RSc.g
P23RSa_P23RSc_Gap.g
P23RSa_P23RSd.g
P23RSa_P23RSd_Gap.g
P23RSa_P5IBa.g
P23RSa_P5IBb.g
P23RSa_P5IBc.g
P23RSa_P5IBd.g
P23RSa_P5RSa.g
P23RSa_P6RSa.g
P23RSa_P6RSb.g
P23RSa_P6RSc.g
P23RSa_P6RSd.g
P23RSa_raninput.g
P23RSa_ST4RS.g
P23RSa_synapsedefs.g
P23RSacell3Dpk.p
P23RSachanpk.g
P23RSaprotodefs.g
P23RSb.g
P23RSb_B23FS.g
P23RSb_B5FS.g
P23RSb_C23FS.g
P23RSb_C5FS.g
P23RSb_I23LTS.g
P23RSb_I5LTS.g
P23RSb_P23FRBa.g
P23RSb_P23FRBa_Gap.g
P23RSb_P23FRBa_TraubGap.g
P23RSb_P23RSa.g
P23RSb_P23RSb.g
P23RSb_P23RSb_Gap.g
P23RSb_P23RSc.g
P23RSb_P23RSc_Gap.g
P23RSb_P23RSd.g
P23RSb_P23RSd_Gap.g
P23RSb_P5IBa.g
P23RSb_P5IBb.g
P23RSb_P5IBc.g
P23RSb_P5IBd.g
P23RSb_P5RSa.g
P23RSb_P6RSa.g
P23RSb_P6RSb.g
P23RSb_P6RSc.g
P23RSb_P6RSd.g
P23RSb_raninput.g
P23RSb_ST4RS.g
P23RSb_synapsedefs.g
P23RSbcell3Dpk.p
P23RSbchanpk.g
P23RSbprotodefs.g
P23RSc.g
P23RSc_B23FS.g
P23RSc_B5FS.g
P23RSc_C23FS.g
P23RSc_C5FS.g
P23RSc_I23LTS.g
P23RSc_I5LTS.g
P23RSc_P23FRBa.g
P23RSc_P23FRBa_Gap.g
P23RSc_P23FRBa_TraubGap.g
P23RSc_P23RSa.g
P23RSc_P23RSb.g
P23RSc_P23RSc.g
P23RSc_P23RSc_Gap.g
P23RSc_P23RSd.g
P23RSc_P23RSd_Gap.g
P23RSc_P5IBa.g
P23RSc_P5IBb.g
P23RSc_P5IBc.g
P23RSc_P5IBd.g
P23RSc_P5RSa.g
P23RSc_P6RSa.g
P23RSc_P6RSb.g
P23RSc_P6RSc.g
P23RSc_P6RSd.g
P23RSc_raninput.g
P23RSc_ST4RS.g
P23RSc_synapsedefs.g
P23RSccell3Dpk.p
P23RScchanpk.g
P23RScprotodefs.g
P23RSd.g
P23RSd_B23FS.g
P23RSd_B5FS.g
P23RSd_C23FS.g
P23RSd_C5FS.g
P23RSd_I23LTS.g
P23RSd_I5LTS.g
P23RSd_P23FRBa.g
P23RSd_P23FRBa_Gap.g
P23RSd_P23FRBa_TraubGap.g
P23RSd_P23RSa.g
P23RSd_P23RSb.g
P23RSd_P23RSc.g
P23RSd_P23RSd.g
P23RSd_P23RSd_Gap.g
P23RSd_P5IBa.g
P23RSd_P5IBb.g
P23RSd_P5IBc.g
P23RSd_P5IBd.g
P23RSd_P5RSa.g
P23RSd_P6RSa.g
P23RSd_P6RSb.g
P23RSd_P6RSc.g
P23RSd_P6RSd.g
P23RSd_raninput.g
P23RSd_ST4RS.g
P23RSd_synapsedefs.g
P23RSdcell3Dpk.p
P23RSdchanpk.g
P23RSdprotodefs.g
P23RSsyncond.g
P5IBa.g
P5IBa_B23FS.g
P5IBa_B5FS.g
P5IBa_C23FS.g
P5IBa_C5FS.g
P5IBa_I23LTS.g
P5IBa_I5LTS.g
P5IBa_P23FRBa.g
P5IBa_P23RSa.g
P5IBa_P23RSb.g
P5IBa_P23RSc.g
P5IBa_P23RSd.g
P5IBa_P5IBa.g
P5IBa_P5IBa_Gap.g
P5IBa_P5IBb.g
P5IBa_P5IBb_Gap.g
P5IBa_P5IBc.g
P5IBa_P5IBc_Gap.g
P5IBa_P5IBd.g
P5IBa_P5IBd_Gap.g
P5IBa_P5RSa.g
P5IBa_P5RSa_Gap.g
P5IBa_P6RSa.g
P5IBa_P6RSb.g
P5IBa_P6RSc.g
P5IBa_P6RSd.g
P5IBa_raninput.g
P5IBa_ST4RS.g
P5IBa_synapsedefs.g
P5IBacell3Dpk.p
P5IBachanpk.g
P5IBaprotodefs.g
P5IBb.g
P5IBb_B23FS.g
P5IBb_B5FS.g
P5IBb_C23FS.g
P5IBb_C5FS.g
P5IBb_I23LTS.g
P5IBb_I5LTS.g
P5IBb_P23FRBa.g
P5IBb_P23RSa.g
P5IBb_P23RSb.g
P5IBb_P23RSc.g
P5IBb_P23RSd.g
P5IBb_P5IBa.g
P5IBb_P5IBb.g
P5IBb_P5IBb_Gap.g
P5IBb_P5IBc.g
P5IBb_P5IBc_Gap.g
P5IBb_P5IBd.g
P5IBb_P5IBd_Gap.g
P5IBb_P5RSa.g
P5IBb_P5RSa_Gap.g
P5IBb_P6RSa.g
P5IBb_P6RSb.g
P5IBb_P6RSc.g
P5IBb_P6RSd.g
P5IBb_raninput.g
P5IBb_ST4RS.g
P5IBb_synapsedefs.g
P5IBbcell3Dpk.p
P5IBbchanpk.g
P5IBbprotodefs.g
P5IBc.g
P5IBc_B23FS.g
P5IBc_B5FS.g
P5IBc_C23FS.g
P5IBc_C5FS.g
P5IBc_I23LTS.g
P5IBc_I5LTS.g
P5IBc_P23FRBa.g
P5IBc_P23RSa.g
P5IBc_P23RSb.g
P5IBc_P23RSc.g
P5IBc_P23RSd.g
P5IBc_P5IBa.g
P5IBc_P5IBb.g
P5IBc_P5IBc.g
P5IBc_P5IBc_Gap.g
P5IBc_P5IBd.g
P5IBc_P5IBd_Gap.g
P5IBc_P5RSa.g
P5IBc_P5RSa_Gap.g
P5IBc_P6RSa.g
P5IBc_P6RSb.g
P5IBc_P6RSc.g
P5IBc_P6RSd.g
P5IBc_raninput.g
P5IBc_ST4RS.g
P5IBc_synapsedefs.g
P5IBccell3Dpk.p
P5IBcchanpk.g
P5IBcprotodefs.g
P5IBd.g
P5IBd_B23FS.g
P5IBd_B5FS.g
P5IBd_C23FS.g
P5IBd_C5FS.g
P5IBd_I23LTS.g
P5IBd_I5LTS.g
P5IBd_P23FRBa.g
P5IBd_P23RSa.g
P5IBd_P23RSb.g
P5IBd_P23RSc.g
P5IBd_P23RSd.g
P5IBd_P5IBa.g
P5IBd_P5IBb.g
P5IBd_P5IBc.g
P5IBd_P5IBd.g
P5IBd_P5IBd_Gap.g
P5IBd_P5RSa.g
P5IBd_P5RSa_Gap.g
P5IBd_P6RSa.g
P5IBd_P6RSb.g
P5IBd_P6RSc.g
P5IBd_P6RSd.g
P5IBd_raninput.g
P5IBd_ST4RS.g
P5IBd_synapsedefs.g
P5IBdcell3Dpk.p
P5IBdchanpk.g
P5IBdprotodefs.g
P5IBsyncond.g
P5RSa.g
P5RSa_B23FS.g
P5RSa_B5FS.g
P5RSa_C23FS.g
P5RSa_C5FS.g
P5RSa_I23LTS.g
P5RSa_I5LTS.g
P5RSa_P23FRBa.g
P5RSa_P23RSa.g
P5RSa_P23RSb.g
P5RSa_P23RSc.g
P5RSa_P23RSd.g
P5RSa_P5IBa.g
P5RSa_P5IBb.g
P5RSa_P5IBc.g
P5RSa_P5IBd.g
P5RSa_P5RSa.g
P5RSa_P5RSa_Gap.g
P5RSa_P6RSa.g
P5RSa_P6RSb.g
P5RSa_P6RSc.g
P5RSa_P6RSd.g
P5RSa_raninput.g
P5RSa_ST4RS.g
P5RSa_synapsedefs.g
P5RSacell3Dpk.p
P5RSachanpk.g
P5RSaprotodefs.g
P6RSa.g
P6RSa_B23FS.g
P6RSa_B5FS.g
P6RSa_C23FS.g
P6RSa_C5FS.g
P6RSa_I23LTS.g
P6RSa_I5LTS.g
P6RSa_nRT.g
P6RSa_P23FRBa.g
P6RSa_P23RSa.g
P6RSa_P23RSb.g
P6RSa_P23RSc.g
P6RSa_P23RSd.g
P6RSa_P5IBa.g
P6RSa_P5IBb.g
P6RSa_P5IBc.g
P6RSa_P5IBd.g
P6RSa_P5RSa.g
P6RSa_P6RSa.g
P6RSa_P6RSa_Gap.g
P6RSa_P6RSb.g
P6RSa_P6RSb_Gap.g
P6RSa_P6RSc.g
P6RSa_P6RSc_Gap.g
P6RSa_P6RSd.g
P6RSa_P6RSd_Gap.g
P6RSa_raninput.g
P6RSa_ST4RS.g
P6RSa_synapsedefs.g
P6RSa_TCR.g
P6RSacell3Dpk.p
P6RSachanpk.g
P6RSaprotodefs.g
P6RSb.g
P6RSb_B23FS.g
P6RSb_B5FS.g
P6RSb_C23FS.g
P6RSb_C5FS.g
P6RSb_I23LTS.g
P6RSb_I5LTS.g
P6RSb_nRT.g
P6RSb_P23FRBa.g
P6RSb_P23RSa.g
P6RSb_P23RSb.g
P6RSb_P23RSc.g
P6RSb_P23RSd.g
P6RSb_P5IBa.g
P6RSb_P5IBb.g
P6RSb_P5IBc.g
P6RSb_P5IBd.g
P6RSb_P5RSa.g
P6RSb_P6RSa.g
P6RSb_P6RSb.g
P6RSb_P6RSb_Gap.g
P6RSb_P6RSc.g
P6RSb_P6RSc_Gap.g
P6RSb_P6RSd.g
P6RSb_P6RSd_Gap.g
P6RSb_raninput.g
P6RSb_ST4RS.g
P6RSb_synapsedefs.g
P6RSb_TCR.g
P6RSbcell3Dpk.p
P6RSbchanpk.g
P6RSbprotodefs.g
P6RSc.g
P6RSc_B23FS.g
P6RSc_B5FS.g
P6RSc_C23FS.g
P6RSc_C5FS.g
P6RSc_I23LTS.g
P6RSc_I5LTS.g
P6RSc_nRT.g
P6RSc_P23FRBa.g
P6RSc_P23RSa.g
P6RSc_P23RSb.g
P6RSc_P23RSc.g
P6RSc_P23RSd.g
P6RSc_P5IBa.g
P6RSc_P5IBb.g
P6RSc_P5IBc.g
P6RSc_P5IBd.g
P6RSc_P5RSa.g
P6RSc_P6RSa.g
P6RSc_P6RSb.g
P6RSc_P6RSc.g
P6RSc_P6RSc_Gap.g
P6RSc_P6RSd.g
P6RSc_P6RSd_Gap.g
P6RSc_raninput.g
P6RSc_ST4RS.g
P6RSc_synapsedefs.g
P6RSc_TCR.g
P6RSccell3Dpk.p
P6RScchanpk.g
P6RScprotodefs.g
P6RSd.g
P6RSd_B23FS.g
P6RSd_B5FS.g
P6RSd_C23FS.g
P6RSd_C5FS.g
P6RSd_I23LTS.g
P6RSd_I5LTS.g
P6RSd_nRT.g
P6RSd_P23FRBa.g
P6RSd_P23RSa.g
P6RSd_P23RSb.g
P6RSd_P23RSc.g
P6RSd_P23RSd.g
P6RSd_P5IBa.g
P6RSd_P5IBb.g
P6RSd_P5IBc.g
P6RSd_P5IBd.g
P6RSd_P5RSa.g
P6RSd_P6RSa.g
P6RSd_P6RSb.g
P6RSd_P6RSc.g
P6RSd_P6RSd.g
P6RSd_P6RSd_Gap.g
P6RSd_raninput.g
P6RSd_ST4RS.g
P6RSd_synapsedefs.g
P6RSd_TCR.g
P6RSdcell3Dpk.p
P6RSdchanpk.g
P6RSdprotodefs.g
P6RSsyncond.g
pgenesis_command
protodefs.g
protospikeB23FS.g
protospikeB5FS.g
protospikeC23FS.g
protospikeC5FS.g
protospikeI23LTS.g
protospikeI5LTS.g
protospikenRT.g
protospikeP23FRBa.g
protospikeP23RSa.g
protospikeP23RSb.g
protospikeP23RSc.g
protospikeP23RSd.g
protospikeP5IBa.g
protospikeP5IBb.g
protospikeP5IBc.g
protospikeP5IBd.g
protospikeP5RSa.g
protospikeP6RSa.g
protospikeP6RSb.g
protospikeP6RSc.g
protospikeP6RSd.g
protospikeST4RS.g
protospikeTCR.g
randominputdefs.g
spikedefs.g
ST4RS.g
ST4RS_B23FS.g
ST4RS_B5FS.g
ST4RS_C23FS.g
ST4RS_C5FS.g
ST4RS_I23LTS.g
ST4RS_I5LTS.g
ST4RS_P23FRBa.g
ST4RS_P23RSa.g
ST4RS_P23RSb.g
ST4RS_P23RSc.g
ST4RS_P23RSd.g
ST4RS_P5IBa.g
ST4RS_P5IBb.g
ST4RS_P5IBc.g
ST4RS_P5IBd.g
ST4RS_P5RSa.g
ST4RS_P6RSa.g
ST4RS_P6RSb.g
ST4RS_P6RSc.g
ST4RS_P6RSd.g
ST4RS_raninput.g
ST4RS_ST4RS.g
ST4RS_ST4RS_Gap.g
ST4RS_synapsedefs.g
ST4RScell3Dpk.p
ST4RSchanpk.g
ST4RSprotodefs.g
ST4RSsyncond.g
synapticdelays.g *
synapticprobsTraub.g
synchansB23FS.g *
synchansB5FS.g *
synchansC23FS.g *
synchansC5FS.g *
synchansI23LTS.g *
synchansI5LTS.g *
synchansnRT.g *
synchansP23FRBa.g *
synchansP23RSa.g *
synchansP23RSb.g *
synchansP23RSc.g *
synchansP23RSd.g *
synchansP5IBa.g *
synchansP5IBb.g *
synchansP5IBc.g *
synchansP5IBd.g *
synchansP5RSa.g *
synchansP6RSa.g *
synchansP6RSb.g *
synchansP6RSc.g *
synchansP6RSd.g *
synchansSPIKEs.g *
synchansSPIKEs_base.g
synchansST4RS.g
synchansTCR.g *
syncond.g
syncond2.g
TCR.g
TCR_B23FS.g
TCR_B5FS.g
TCR_C23FS.g
TCR_C5FS.g
TCR_nRT.g
TCR_P23FRBa.g
TCR_P23RSa.g
TCR_P23RSb.g
TCR_P23RSc.g
TCR_P23RSd.g
TCR_P5IBa.g
TCR_P5IBb.g
TCR_P5IBc.g
TCR_P5IBd.g
TCR_P5RSa.g
TCR_P6RSa.g
TCR_P6RSb.g
TCR_P6RSc.g
TCR_P6RSd.g
TCR_raninput.g
TCR_ST4RS.g
TCR_synapsedefs.g
TCRcellpk.p
TCRchanpk.g
TCRprotodefs.g
TCRsyncond.g
                            
// spikedefs.g - defining SPIKE elements for all somae

ce /P23RSa/soma

make_spk1
addmsg /P23RSa/soma /P23RSa/soma/spk1 INPUT Vm

ce /

ce /P23RSb/soma

make_spk2
addmsg /P23RSb/soma /P23RSb/soma/spk2 INPUT Vm

ce /

ce /P23RSc/soma

make_spk3
addmsg /P23RSc/soma /P23RSc/soma/spk3 INPUT Vm

ce /

ce /P23RSd/soma

make_spk4
addmsg /P23RSd/soma /P23RSd/soma/spk4 INPUT Vm

ce /

ce /B23FS/soma

make_spk5
addmsg /B23FS/soma /B23FS/soma/spk5 INPUT Vm

ce /

ce /P5IBa/soma

make_spk6
addmsg /P5IBa/soma /P5IBa/soma/spk6 INPUT Vm

ce /

ce /P5IBb/soma

make_spk7
addmsg /P5IBb/soma /P5IBb/soma/spk7 INPUT Vm

ce /

ce /P5IBc/soma

make_spk8
addmsg /P5IBc/soma /P5IBc/soma/spk8 INPUT Vm

ce /

ce /P5IBd/soma

make_spk9
addmsg /P5IBd/soma /P5IBd/soma/spk9 INPUT Vm

ce /

ce /B5FS/soma

make_spk10
addmsg /B5FS/soma /B5FS/soma/spk10 INPUT Vm

ce /

ce /P6RSa/soma

make_spk11
addmsg /P6RSa/soma /P6RSa/soma/spk11 INPUT Vm

ce /

ce /P6RSb/soma

make_spk12
addmsg /P6RSb/soma /P6RSb/soma/spk12 INPUT Vm

ce /

if ({columntype == 0})

     ce /P6RSc/soma

     make_spk13
     addmsg /P6RSc/soma /P6RSc/soma/spk13 INPUT Vm

     ce /

     ce /P6RSd/soma

     make_spk14
     addmsg /P6RSd/soma /P6RSd/soma/spk14 INPUT Vm

     ce /

end

ce /C23FS/soma

make_spk15
addmsg /C23FS/soma /C23FS/soma/spk15 INPUT Vm

ce /

ce /C5FS/soma

make_spk16
addmsg /C5FS/soma /C5FS/soma/spk16 INPUT Vm

ce /

ce /ST4RS/soma

make_spk17
addmsg /ST4RS/soma /ST4RS/soma/spk17 INPUT Vm

ce /

ce /I23LTS/soma

make_spk18
addmsg /I23LTS/soma /I23LTS/soma/spk18 INPUT Vm

ce /

ce /I5LTS/soma

make_spk19
addmsg /I5LTS/soma /I5LTS/soma/spk19 INPUT Vm

ce /

if ({thalamocortical == 1})

     ce /TCR/soma

     make_spk20
     addmsg /TCR/soma /TCR/soma/spk20 INPUT Vm

     ce /

     ce /nRT/soma

     make_spk21
     addmsg /nRT/soma /nRT/soma/spk21 INPUT Vm

     ce /

end

ce /P23FRBa/soma

make_spk22
addmsg /P23FRBa/soma /P23FRBa/soma/spk22 INPUT Vm

ce /

ce /P5RSa/soma

make_spk23
addmsg /P5RSa/soma /P5RSa/soma/spk23 INPUT Vm

ce /

Loading data, please wait...