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Theory and simulation of integrate-and-fire neurons driven by shot noise (Droste & Lindner 2017)
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Model Information
Model File
Citations
Accession:
228604
This archive contains source code for the paper "Exact analytical results for integrate-and-fire neurons driven by excitatory shot noise" by Droste and Lindner, 2017. Specifically, it contains a Python implementation of the analytical formulas derived in that paper (allowing to calculate firing rate, CV and stationary voltage distribution of general integrate-and-fire neurons driven by excitatory shot noise, as well as power spectrum and rate-response of leaky integrate-and-fire neurons with such input) and C++ code implementing a Monte-Carlo simulation to estimate these quantities. A sample Jupyter notebook to play around with the analytics is included, as are scripts to reproduce the figures from the paper.
Reference:
1 .
Droste F, Lindner B (2017) Exact analytical results for integrate-and-fire neurons driven by excitatory shot noise
J. Comp. Neurosci.
Model Information
(Click on a link to find other models with that property)
Model Type:
Brain Region(s)/Organism:
Cell Type(s):
Abstract integrate-and-fire leaky neuron;
Abstract theta neuron;
Channel(s):
Gap Junctions:
Receptor(s):
Gene(s):
Transmitter(s):
Simulation Environment:
C or C++ program;
Python;
Model Concept(s):
Implementer(s):
Droste, Felix [fedro at posteo.de];
/
shotnoise_analytics
latex_param_values
.git
hooks
applypatch-msg.sample
*
Other models using applypatch-msg.sample:
Olfactory Bulb mitral-granule network generates beta oscillations (Osinski & Kay 2016)
Theory and simulation of integrate-and-fire neurons driven by shot noise (Droste & Lindner 2017)
Theory and simulation of integrate-and-fire neurons driven by shot noise (Droste & Lindner 2017)
Theory and simulation of integrate-and-fire neurons driven by shot noise (Droste & Lindner 2017)
Theory and simulation of integrate-and-fire neurons driven by shot noise (Droste & Lindner 2017)
commit-msg.sample
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Theory and simulation of integrate-and-fire neurons driven by shot noise (Droste & Lindner 2017)
Theory and simulation of integrate-and-fire neurons driven by shot noise (Droste & Lindner 2017)
Theory and simulation of integrate-and-fire neurons driven by shot noise (Droste & Lindner 2017)
Theory and simulation of integrate-and-fire neurons driven by shot noise (Droste & Lindner 2017)
Vibration-sensitive Honeybee interneurons (Ai et al 2017)
post-update.sample
*
Other models using post-update.sample:
A general model of hippocampal and dorsal striatal learning and decision making (Geerts et al 2020)
Adaptive dual control of deep brain stimulation in Parkinsons disease simulations (Grado et al 2018)
Current Dipole in Laminar Neocortex (Lee et al. 2013)
Dendritic Discrimination of Temporal Input Sequences (Branco et al. 2010)
Distributed computing tool for NEURON, NEURONPM (screensaver) (Calin-Jageman and Katz 2006)
Inverse stochastic resonance of cerebellar Purkinje cell (Buchin et al. 2016)
Olfactory Bulb mitral-granule network generates beta oscillations (Osinski & Kay 2016)
Optimal synaptic assignment for locomotory behavior in C. elegans (Rakowski & Karbowski 2017)
Optimal synaptic assignment for locomotory behavior in C. elegans (Rakowski & Karbowski 2017)
Optimal synaptic assignment for locomotory behavior in C. elegans (Rakowski & Karbowski 2017)
Rat LGN Thalamocortical Neuron (Connelly et al 2015, 2016)
Recurrent amplification of grid-cell activity (D'Albis and Kempter 2020)
Striatal Spiny Projection Neuron, inhibition enhances spatial specificity (Dorman et al 2018)
Subiculum network model with dynamic chloride/potassium homeostasis (Buchin et al 2016)
Theory and simulation of integrate-and-fire neurons driven by shot noise (Droste & Lindner 2017)
Theory and simulation of integrate-and-fire neurons driven by shot noise (Droste & Lindner 2017)
Theory and simulation of integrate-and-fire neurons driven by shot noise (Droste & Lindner 2017)
Theory and simulation of integrate-and-fire neurons driven by shot noise (Droste & Lindner 2017)
Vibration-sensitive Honeybee interneurons (Ai et al 2017)
pre-applypatch.sample
*
Other models using pre-applypatch.sample:
Olfactory Bulb mitral-granule network generates beta oscillations (Osinski & Kay 2016)
Theory and simulation of integrate-and-fire neurons driven by shot noise (Droste & Lindner 2017)
Theory and simulation of integrate-and-fire neurons driven by shot noise (Droste & Lindner 2017)
Theory and simulation of integrate-and-fire neurons driven by shot noise (Droste & Lindner 2017)
Theory and simulation of integrate-and-fire neurons driven by shot noise (Droste & Lindner 2017)
pre-commit.sample
*
Other models using pre-commit.sample:
Adaptive dual control of deep brain stimulation in Parkinsons disease simulations (Grado et al 2018)
Current Dipole in Laminar Neocortex (Lee et al. 2013)
Dendritic Discrimination of Temporal Input Sequences (Branco et al. 2010)
Distributed computing tool for NEURON, NEURONPM (screensaver) (Calin-Jageman and Katz 2006)
Inverse stochastic resonance of cerebellar Purkinje cell (Buchin et al. 2016)
Olfactory Bulb mitral-granule network generates beta oscillations (Osinski & Kay 2016)
Optimal synaptic assignment for locomotory behavior in C. elegans (Rakowski & Karbowski 2017)
Optimal synaptic assignment for locomotory behavior in C. elegans (Rakowski & Karbowski 2017)
Optimal synaptic assignment for locomotory behavior in C. elegans (Rakowski & Karbowski 2017)
Rat LGN Thalamocortical Neuron (Connelly et al 2015, 2016)
Recurrent amplification of grid-cell activity (D'Albis and Kempter 2020)
Striatal Spiny Projection Neuron, inhibition enhances spatial specificity (Dorman et al 2018)
Subiculum network model with dynamic chloride/potassium homeostasis (Buchin et al 2016)
Theory and simulation of integrate-and-fire neurons driven by shot noise (Droste & Lindner 2017)
Theory and simulation of integrate-and-fire neurons driven by shot noise (Droste & Lindner 2017)
Theory and simulation of integrate-and-fire neurons driven by shot noise (Droste & Lindner 2017)
Theory and simulation of integrate-and-fire neurons driven by shot noise (Droste & Lindner 2017)
Vibration-sensitive Honeybee interneurons (Ai et al 2017)
prepare-commit-msg.sample
*
Other models using prepare-commit-msg.sample:
Current Dipole in Laminar Neocortex (Lee et al. 2013)
Dendritic Discrimination of Temporal Input Sequences (Branco et al. 2010)
Distributed computing tool for NEURON, NEURONPM (screensaver) (Calin-Jageman and Katz 2006)
Inverse stochastic resonance of cerebellar Purkinje cell (Buchin et al. 2016)
Olfactory Bulb mitral-granule network generates beta oscillations (Osinski & Kay 2016)
Optimal synaptic assignment for locomotory behavior in C. elegans (Rakowski & Karbowski 2017)
Optimal synaptic assignment for locomotory behavior in C. elegans (Rakowski & Karbowski 2017)
Optimal synaptic assignment for locomotory behavior in C. elegans (Rakowski & Karbowski 2017)
Rat LGN Thalamocortical Neuron (Connelly et al 2015, 2016)
Recurrent amplification of grid-cell activity (D'Albis and Kempter 2020)
Striatal Spiny Projection Neuron, inhibition enhances spatial specificity (Dorman et al 2018)
Subiculum network model with dynamic chloride/potassium homeostasis (Buchin et al 2016)
Theory and simulation of integrate-and-fire neurons driven by shot noise (Droste & Lindner 2017)
Theory and simulation of integrate-and-fire neurons driven by shot noise (Droste & Lindner 2017)
Theory and simulation of integrate-and-fire neurons driven by shot noise (Droste & Lindner 2017)
Theory and simulation of integrate-and-fire neurons driven by shot noise (Droste & Lindner 2017)
pre-push.sample
*
Other models using pre-push.sample:
Olfactory Bulb mitral-granule network generates beta oscillations (Osinski & Kay 2016)
Theory and simulation of integrate-and-fire neurons driven by shot noise (Droste & Lindner 2017)
Theory and simulation of integrate-and-fire neurons driven by shot noise (Droste & Lindner 2017)
Theory and simulation of integrate-and-fire neurons driven by shot noise (Droste & Lindner 2017)
Theory and simulation of integrate-and-fire neurons driven by shot noise (Droste & Lindner 2017)
pre-rebase.sample
*
Other models using pre-rebase.sample:
Recurrent amplification of grid-cell activity (D'Albis and Kempter 2020)
Theory and simulation of integrate-and-fire neurons driven by shot noise (Droste & Lindner 2017)
Theory and simulation of integrate-and-fire neurons driven by shot noise (Droste & Lindner 2017)
Theory and simulation of integrate-and-fire neurons driven by shot noise (Droste & Lindner 2017)
Theory and simulation of integrate-and-fire neurons driven by shot noise (Droste & Lindner 2017)
update.sample
*
Other models using update.sample:
Olfactory Bulb mitral-granule network generates beta oscillations (Osinski & Kay 2016)
Theory and simulation of integrate-and-fire neurons driven by shot noise (Droste & Lindner 2017)
Theory and simulation of integrate-and-fire neurons driven by shot noise (Droste & Lindner 2017)
Theory and simulation of integrate-and-fire neurons driven by shot noise (Droste & Lindner 2017)
Theory and simulation of integrate-and-fire neurons driven by shot noise (Droste & Lindner 2017)
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