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Influence of dendritic structure on neocortical neuron firing patterns (Mainen and Sejnowski 1996)
 
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Accession:
2488
This package contains compartmental models of four reconstructed neocortical neurons (layer 3 Aspiny, layer 4 Stellate, layer 3 and layer 5 Pyramidal neurons) with active dendritic currents using NEURON. Running this simulation demonstrates that an entire spectrum of firing patterns can be reproduced in this set of model neurons which share a common distribution of ion channels and differ only in their dendritic geometry. The reference paper is: Z. F. Mainen and T. J. Sejnowski (1996) Influence of dendritic structure on firing pattern in model neocortical neurons. Nature 382: 363-366. See also http://www.cnl.salk.edu/~zach/methods.html and http://www.cnl.salk.edu/~zach/ More info in readme.txt file below made visible by clicking on the patdemo folder and then on the readme.txt file.
Reference:
1 .
Mainen ZF, Sejnowski TJ (1996) Influence of dendritic structure on firing pattern in model neocortical neurons.
Nature
382
:363-6
[
PubMed
]
Model Information
(Click on a link to find other models with that property)
Model Type:
Neuron or other electrically excitable cell;
Brain Region(s)/Organism:
Cell Type(s):
Neocortex L5/6 pyramidal GLU cell;
Neocortex L2/3 pyramidal GLU cell;
Myelinated neuron;
Neocortex spiny stellate cell;
Channel(s):
I Na,t;
I K;
I M;
I K,Ca;
I Sodium;
I Calcium;
I Potassium;
Gap Junctions:
Receptor(s):
Gene(s):
Transmitter(s):
Simulation Environment:
NEURON;
Model Concept(s):
Activity Patterns;
Active Dendrites;
Influence of Dendritic Geometry;
Detailed Neuronal Models;
Implementer(s):
Mainen, Zach [Mainen at cshl.edu];
Search NeuronDB
for information about:
Neocortex L5/6 pyramidal GLU cell
;
Neocortex L2/3 pyramidal GLU cell
;
I Na,t
;
I K
;
I M
;
I K,Ca
;
I Sodium
;
I Calcium
;
I Potassium
;
/
cells
cells
j4a.hoc
*
Other models using j4a.hoc:
Intracortical synaptic potential modulation by presynaptic somatic potential (Shu et al. 2006, 2007)
L5 pyr. cell spiking control by oscillatory inhibition in distal apical dendrites (Li et al 2013)
Spatial gridding and temporal accuracy in NEURON (Hines and Carnevale 2001)
j7.hoc
*
Other models using j7.hoc:
Intracortical synaptic potential modulation by presynaptic somatic potential (Shu et al. 2006, 2007)
j8.hoc
*
Other models using j8.hoc:
Cortical pyramidal neuron, phase response curve (Stiefel et al 2009)
Effects of neural morphology on global and focal NMDA-spikes (Poleg-Polsky 2015)
Intracortical synaptic potential modulation by presynaptic somatic potential (Shu et al. 2006, 2007)
lcAS3.hoc
*
Other models using lcAS3.hoc:
Effects of neural morphology on global and focal NMDA-spikes (Poleg-Polsky 2015)
Intracortical synaptic potential modulation by presynaptic somatic potential (Shu et al. 2006, 2007)
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1a. L3 Aspiny
1b. L4 Stellate
1c. L3 Pyramid
1d. L5 Pyramid
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