/* Created by Language version: 7.5.0 */
/* VECTORIZED */
#define NRN_VECTORIZED 1
#include <stdio.h>
#include <stdlib.h>
#include <math.h>
#include "scoplib_ansi.h"
#undef PI
#define nil 0
#include "md1redef.h"
#include "section.h"
#include "nrniv_mf.h"
#include "md2redef.h"
#if METHOD3
extern int _method3;
#endif
#if !NRNGPU
#undef exp
#define exp hoc_Exp
extern double hoc_Exp(double);
#endif
#define nrn_init _nrn_init__mrg_axnode
#define _nrn_initial _nrn_initial__mrg_axnode
#define nrn_cur _nrn_cur__mrg_axnode
#define _nrn_current _nrn_current__mrg_axnode
#define nrn_jacob _nrn_jacob__mrg_axnode
#define nrn_state _nrn_state__mrg_axnode
#define _net_receive _net_receive__mrg_axnode
#define evaluate_fct evaluate_fct__mrg_axnode
#define states states__mrg_axnode
#define _threadargscomma_ _p, _ppvar, _thread, _nt,
#define _threadargsprotocomma_ double* _p, Datum* _ppvar, Datum* _thread, _NrnThread* _nt,
#define _threadargs_ _p, _ppvar, _thread, _nt
#define _threadargsproto_ double* _p, Datum* _ppvar, Datum* _thread, _NrnThread* _nt
/*SUPPRESS 761*/
/*SUPPRESS 762*/
/*SUPPRESS 763*/
/*SUPPRESS 765*/
extern double *getarg();
/* Thread safe. No static _p or _ppvar. */
#define t _nt->_t
#define dt _nt->_dt
#define gnapbar _p[0]
#define gnabar _p[1]
#define gkbar _p[2]
#define gl _p[3]
#define ena _p[4]
#define ek _p[5]
#define el _p[6]
#define inap _p[7]
#define ina _p[8]
#define ik _p[9]
#define il _p[10]
#define mp_inf _p[11]
#define m_inf _p[12]
#define h_inf _p[13]
#define s_inf _p[14]
#define tau_mp _p[15]
#define tau_m _p[16]
#define tau_h _p[17]
#define tau_s _p[18]
#define mp _p[19]
#define m _p[20]
#define h _p[21]
#define s _p[22]
#define Dmp _p[23]
#define Dm _p[24]
#define Dh _p[25]
#define Ds _p[26]
#define q10_1 _p[27]
#define q10_2 _p[28]
#define q10_3 _p[29]
#define v _p[30]
#define _g _p[31]
#if MAC
#if !defined(v)
#define v _mlhv
#endif
#if !defined(h)
#define h _mlhh
#endif
#endif
#if defined(__cplusplus)
extern "C" {
#endif
static int hoc_nrnpointerindex = -1;
static Datum* _extcall_thread;
static Prop* _extcall_prop;
/* external NEURON variables */
extern double celsius;
/* declaration of user functions */
static void _hoc_Exp(void);
static void _hoc_evaluate_fct(void);
static void _hoc_vtrap(void);
static void _hoc_vtrap8(void);
static void _hoc_vtrap7(void);
static void _hoc_vtrap6(void);
static void _hoc_vtrap2(void);
static void _hoc_vtrap1(void);
static int _mechtype;
extern void _nrn_cacheloop_reg(int, int);
extern void hoc_register_prop_size(int, int, int);
extern void hoc_register_limits(int, HocParmLimits*);
extern void hoc_register_units(int, HocParmUnits*);
extern void nrn_promote(Prop*, int, int);
extern Memb_func* memb_func;
extern void _nrn_setdata_reg(int, void(*)(Prop*));
static void _setdata(Prop* _prop) {
_extcall_prop = _prop;
}
static void _hoc_setdata() {
Prop *_prop, *hoc_getdata_range(int);
_prop = hoc_getdata_range(_mechtype);
_setdata(_prop);
hoc_retpushx(1.);
}
/* connect user functions to hoc names */
static VoidFunc hoc_intfunc[] = {
"setdata_mrg_axnode", _hoc_setdata,
"Exp_mrg_axnode", _hoc_Exp,
"evaluate_fct_mrg_axnode", _hoc_evaluate_fct,
"vtrap_mrg_axnode", _hoc_vtrap,
"vtrap8_mrg_axnode", _hoc_vtrap8,
"vtrap7_mrg_axnode", _hoc_vtrap7,
"vtrap6_mrg_axnode", _hoc_vtrap6,
"vtrap2_mrg_axnode", _hoc_vtrap2,
"vtrap1_mrg_axnode", _hoc_vtrap1,
0, 0
};
#define Exp Exp_mrg_axnode
#define vtrap vtrap_mrg_axnode
#define vtrap8 vtrap8_mrg_axnode
#define vtrap7 vtrap7_mrg_axnode
#define vtrap6 vtrap6_mrg_axnode
#define vtrap2 vtrap2_mrg_axnode
#define vtrap1 vtrap1_mrg_axnode
extern double Exp( _threadargsprotocomma_ double );
extern double vtrap( _threadargsprotocomma_ double );
extern double vtrap8( _threadargsprotocomma_ double );
extern double vtrap7( _threadargsprotocomma_ double );
extern double vtrap6( _threadargsprotocomma_ double );
extern double vtrap2( _threadargsprotocomma_ double );
extern double vtrap1( _threadargsprotocomma_ double );
/* declare global and static user variables */
#define asC asC_mrg_axnode
double asC = -5;
#define asB asB_mrg_axnode
double asB = -27;
#define asA asA_mrg_axnode
double asA = 0.3;
#define ahC ahC_mrg_axnode
double ahC = 11;
#define ahB ahB_mrg_axnode
double ahB = 114;
#define ahA ahA_mrg_axnode
double ahA = 0.062;
#define amC amC_mrg_axnode
double amC = 10.3;
#define amB amB_mrg_axnode
double amB = 21.4;
#define amA amA_mrg_axnode
double amA = 1.86;
#define ampC ampC_mrg_axnode
double ampC = 10.2;
#define ampB ampB_mrg_axnode
double ampB = 27;
#define ampA ampA_mrg_axnode
double ampA = 0.01;
#define bsC bsC_mrg_axnode
double bsC = -1;
#define bsB bsB_mrg_axnode
double bsB = 10;
#define bsA bsA_mrg_axnode
double bsA = 0.03;
#define bhC bhC_mrg_axnode
double bhC = 13.4;
#define bhB bhB_mrg_axnode
double bhB = 31.8;
#define bhA bhA_mrg_axnode
double bhA = 2.3;
#define bmC bmC_mrg_axnode
double bmC = 9.16;
#define bmB bmB_mrg_axnode
double bmB = 25.7;
#define bmA bmA_mrg_axnode
double bmA = 0.086;
#define bmpC bmpC_mrg_axnode
double bmpC = 10;
#define bmpB bmpB_mrg_axnode
double bmpB = 34;
#define bmpA bmpA_mrg_axnode
double bmpA = 0.00025;
#define vtraub vtraub_mrg_axnode
double vtraub = -80;
/* some parameters have upper and lower limits */
static HocParmLimits _hoc_parm_limits[] = {
0,0,0
};
static HocParmUnits _hoc_parm_units[] = {
"gnapbar_mrg_axnode", "mho/cm2",
"gnabar_mrg_axnode", "mho/cm2",
"gkbar_mrg_axnode", "mho/cm2",
"gl_mrg_axnode", "mho/cm2",
"ena_mrg_axnode", "mV",
"ek_mrg_axnode", "mV",
"el_mrg_axnode", "mV",
"inap_mrg_axnode", "mA/cm2",
"ina_mrg_axnode", "mA/cm2",
"ik_mrg_axnode", "mA/cm2",
"il_mrg_axnode", "mA/cm2",
0,0
};
static double delta_t = 1;
static double h0 = 0;
static double m0 = 0;
static double mp0 = 0;
static double s0 = 0;
/* connect global user variables to hoc */
static DoubScal hoc_scdoub[] = {
"vtraub_mrg_axnode", &vtraub_mrg_axnode,
"ampA_mrg_axnode", &A_mrg_axnode,
"ampB_mrg_axnode", &B_mrg_axnode,
"ampC_mrg_axnode", &C_mrg_axnode,
"bmpA_mrg_axnode", &bmpA_mrg_axnode,
"bmpB_mrg_axnode", &bmpB_mrg_axnode,
"bmpC_mrg_axnode", &bmpC_mrg_axnode,
"amA_mrg_axnode", &amA_mrg_axnode,
"amB_mrg_axnode", &amB_mrg_axnode,
"amC_mrg_axnode", &amC_mrg_axnode,
"bmA_mrg_axnode", &bmA_mrg_axnode,
"bmB_mrg_axnode", &bmB_mrg_axnode,
"bmC_mrg_axnode", &bmC_mrg_axnode,
"ahA_mrg_axnode", &ahA_mrg_axnode,
"ahB_mrg_axnode", &ahB_mrg_axnode,
"ahC_mrg_axnode", &ahC_mrg_axnode,
"bhA_mrg_axnode", &bhA_mrg_axnode,
"bhB_mrg_axnode", &bhB_mrg_axnode,
"bhC_mrg_axnode", &bhC_mrg_axnode,
"asA_mrg_axnode", &asA_mrg_axnode,
"asB_mrg_axnode", &asB_mrg_axnode,
"asC_mrg_axnode", &asC_mrg_axnode,
"bsA_mrg_axnode", &bsA_mrg_axnode,
"bsB_mrg_axnode", &bsB_mrg_axnode,
"bsC_mrg_axnode", &bsC_mrg_axnode,
0,0
};
static DoubVec hoc_vdoub[] = {
0,0,0
};
static double _sav_indep;
static void nrn_alloc(Prop*);
static void nrn_init(_NrnThread*, _Memb_list*, int);
static void nrn_state(_NrnThread*, _Memb_list*, int);
static void nrn_cur(_NrnThread*, _Memb_list*, int);
static void nrn_jacob(_NrnThread*, _Memb_list*, int);
static int _ode_count(int);
static void _ode_map(int, double**, double**, double*, Datum*, double*, int);
static void _ode_spec(_NrnThread*, _Memb_list*, int);
static void _ode_matsol(_NrnThread*, _Memb_list*, int);
#define _cvode_ieq _ppvar[0]._i
static void _ode_matsol_instance1(_threadargsproto_);
/* connect range variables in _p that hoc is supposed to know about */
static const char *_mechanism[] = {
"7.5.0",
"mrg_axnode",
"gnapbar_mrg_axnode",
"gnabar_mrg_axnode",
"gkbar_mrg_axnode",
"gl_mrg_axnode",
"ena_mrg_axnode",
"ek_mrg_axnode",
"el_mrg_axnode",
0,
"inap_mrg_axnode",
"ina_mrg_axnode",
"ik_mrg_axnode",
"il_mrg_axnode",
"mp_inf_mrg_axnode",
"m_inf_mrg_axnode",
"h_inf_mrg_axnode",
"s_inf_mrg_axnode",
"tau_mp_mrg_axnode",
"tau_m_mrg_axnode",
"tau_h_mrg_axnode",
"tau_s_mrg_axnode",
0,
"mp_mrg_axnode",
"m_mrg_axnode",
"h_mrg_axnode",
"s_mrg_axnode",
0,
0};
extern Prop* need_memb(Symbol*);
static void nrn_alloc(Prop* _prop) {
Prop *prop_ion;
double *_p; Datum *_ppvar;
_p = nrn_prop_data_alloc(_mechtype, 32, _prop);
/*initialize range parameters*/
gnapbar = 0.01;
gnabar = 3;
gkbar = 0.08;
gl = 0.007;
ena = 50;
ek = -90;
el = -90;
_prop->param = _p;
_prop->param_size = 32;
_ppvar = nrn_prop_datum_alloc(_mechtype, 1, _prop);
_prop->dparam = _ppvar;
/*connect ionic variables to this model*/
}
static void _initlists();
/* some states have an absolute tolerance */
static Symbol** _atollist;
static HocStateTolerance _hoc_state_tol[] = {
0,0
};
extern Symbol* hoc_lookup(const char*);
extern void _nrn_thread_reg(int, int, void(*)(Datum*));
extern void _nrn_thread_table_reg(int, void(*)(double*, Datum*, Datum*, _NrnThread*, int));
extern void hoc_register_tolerance(int, HocStateTolerance*, Symbol***);
extern void _cvode_abstol( Symbol**, double*, int);
void _MRG_AXNODE_reg() {
int _vectorized = 1;
_initlists();
register_mech(_mechanism, nrn_alloc,nrn_cur, nrn_jacob, nrn_state, nrn_init, hoc_nrnpointerindex, 1);
_mechtype = nrn_get_mechtype(_mechanism[1]);
_nrn_setdata_reg(_mechtype, _setdata);
hoc_register_prop_size(_mechtype, 32, 1);
hoc_register_dparam_semantics(_mechtype, 0, "cvodeieq");
hoc_register_cvode(_mechtype, _ode_count, _ode_map, _ode_spec, _ode_matsol);
hoc_register_tolerance(_mechtype, _hoc_state_tol, &_atollist);
hoc_register_var(hoc_scdoub, hoc_vdoub, hoc_intfunc);
ivoc_help("help ?1 mrg_axnode /home/mcapll/JA1/simulations/stimulation_ja1_revisions/monophasic/current_00500nA/EC/x86_64/MRG_AXNODE.mod\n");
hoc_register_limits(_mechtype, _hoc_parm_limits);
hoc_register_units(_mechtype, _hoc_parm_units);
}
static int _reset;
static char *modelname = "Motor Axon Node channels";
static int error;
static int _ninits = 0;
static int _match_recurse=1;
static void _modl_cleanup(){ _match_recurse=1;}
static int evaluate_fct(_threadargsprotocomma_ double);
static int _ode_spec1(_threadargsproto_);
/*static int _ode_matsol1(_threadargsproto_);*/
static int _slist1[4], _dlist1[4];
static int states(_threadargsproto_);
/*CVODE*/
static int _ode_spec1 (double* _p, Datum* _ppvar, Datum* _thread, _NrnThread* _nt) {int _reset = 0; {
evaluate_fct ( _threadargscomma_ v ) ;
Dmp = ( mp_inf - mp ) / tau_mp ;
Dm = ( m_inf - m ) / tau_m ;
Dh = ( h_inf - h ) / tau_h ;
Ds = ( s_inf - s ) / tau_s ;
}
return _reset;
}
static int _ode_matsol1 (double* _p, Datum* _ppvar, Datum* _thread, _NrnThread* _nt) {
evaluate_fct ( _threadargscomma_ v ) ;
Dmp = Dmp / (1. - dt*( ( ( ( - 1.0 ) ) ) / tau_mp )) ;
Dm = Dm / (1. - dt*( ( ( ( - 1.0 ) ) ) / tau_m )) ;
Dh = Dh / (1. - dt*( ( ( ( - 1.0 ) ) ) / tau_h )) ;
Ds = Ds / (1. - dt*( ( ( ( - 1.0 ) ) ) / tau_s )) ;
return 0;
}
/*END CVODE*/
static int states (double* _p, Datum* _ppvar, Datum* _thread, _NrnThread* _nt) { {
evaluate_fct ( _threadargscomma_ v ) ;
mp = mp + (1. - exp(dt*(( ( ( - 1.0 ) ) ) / tau_mp)))*(- ( ( ( mp_inf ) ) / tau_mp ) / ( ( ( ( - 1.0 ) ) ) / tau_mp ) - mp) ;
m = m + (1. - exp(dt*(( ( ( - 1.0 ) ) ) / tau_m)))*(- ( ( ( m_inf ) ) / tau_m ) / ( ( ( ( - 1.0 ) ) ) / tau_m ) - m) ;
h = h + (1. - exp(dt*(( ( ( - 1.0 ) ) ) / tau_h)))*(- ( ( ( h_inf ) ) / tau_h ) / ( ( ( ( - 1.0 ) ) ) / tau_h ) - h) ;
s = s + (1. - exp(dt*(( ( ( - 1.0 ) ) ) / tau_s)))*(- ( ( ( s_inf ) ) / tau_s ) / ( ( ( ( - 1.0 ) ) ) / tau_s ) - s) ;
}
return 0;
}
static int evaluate_fct ( _threadargsprotocomma_ double _lv ) {
double _la , _lb , _lv2 ;
_la = q10_1 * vtrap1 ( _threadargscomma_ _lv ) ;
_lb = q10_1 * vtrap2 ( _threadargscomma_ _lv ) ;
tau_mp = 1.0 / ( _la + _lb ) ;
mp_inf = _la / ( _la + _lb ) ;
_la = q10_1 * vtrap6 ( _threadargscomma_ _lv ) ;
_lb = q10_1 * vtrap7 ( _threadargscomma_ _lv ) ;
tau_m = 1.0 / ( _la + _lb ) ;
m_inf = _la / ( _la + _lb ) ;
_la = q10_2 * vtrap8 ( _threadargscomma_ _lv ) ;
_lb = q10_2 * bhA / ( 1.0 + Exp ( _threadargscomma_ - ( _lv + bhB ) / bhC ) ) ;
tau_h = 1.0 / ( _la + _lb ) ;
h_inf = _la / ( _la + _lb ) ;
_lv2 = _lv - vtraub ;
_la = q10_3 * asA / ( Exp ( _threadargscomma_ ( _lv2 + asB ) / asC ) + 1.0 ) ;
_lb = q10_3 * bsA / ( Exp ( _threadargscomma_ ( _lv2 + bsB ) / bsC ) + 1.0 ) ;
tau_s = 1.0 / ( _la + _lb ) ;
s_inf = _la / ( _la + _lb ) ;
return 0; }
static void _hoc_evaluate_fct(void) {
double _r;
double* _p; Datum* _ppvar; Datum* _thread; _NrnThread* _nt;
if (_extcall_prop) {_p = _extcall_prop->param; _ppvar = _extcall_prop->dparam;}else{ _p = (double*)0; _ppvar = (Datum*)0; }
_thread = _extcall_thread;
_nt = nrn_threads;
_r = 1.;
evaluate_fct ( _p, _ppvar, _thread, _nt, *getarg(1) );
hoc_retpushx(_r);
}
double vtrap ( _threadargsprotocomma_ double _lx ) {
double _lvtrap;
if ( _lx < - 50.0 ) {
_lvtrap = 0.0 ;
}
else {
_lvtrap = bsA / ( Exp ( _threadargscomma_ ( _lx + bsB ) / bsC ) + 1.0 ) ;
}
return _lvtrap;
}
static void _hoc_vtrap(void) {
double _r;
double* _p; Datum* _ppvar; Datum* _thread; _NrnThread* _nt;
if (_extcall_prop) {_p = _extcall_prop->param; _ppvar = _extcall_prop->dparam;}else{ _p = (double*)0; _ppvar = (Datum*)0; }
_thread = _extcall_thread;
_nt = nrn_threads;
_r = vtrap ( _p, _ppvar, _thread, _nt, *getarg(1) );
hoc_retpushx(_r);
}
double vtrap1 ( _threadargsprotocomma_ double _lx ) {
double _lvtrap1;
if ( fabs ( ( _lx + ampB ) / ampC ) < 1e-6 ) {
_lvtrap1 = ampA * ampC ;
}
else {
_lvtrap1 = ( ampA * ( _lx + ampB ) ) / ( 1.0 - Exp ( _threadargscomma_ - ( _lx + ampB ) / ampC ) ) ;
}
return _lvtrap1;
}
static void _hoc_vtrap1(void) {
double _r;
double* _p; Datum* _ppvar; Datum* _thread; _NrnThread* _nt;
if (_extcall_prop) {_p = _extcall_prop->param; _ppvar = _extcall_prop->dparam;}else{ _p = (double*)0; _ppvar = (Datum*)0; }
_thread = _extcall_thread;
_nt = nrn_threads;
_r = vtrap1 ( _p, _ppvar, _thread, _nt, *getarg(1) );
hoc_retpushx(_r);
}
double vtrap2 ( _threadargsprotocomma_ double _lx ) {
double _lvtrap2;
if ( fabs ( ( _lx + bmpB ) / bmpC ) < 1e-6 ) {
_lvtrap2 = bmpA * bmpC ;
}
else {
_lvtrap2 = ( bmpA * ( - ( _lx + bmpB ) ) ) / ( 1.0 - Exp ( _threadargscomma_ ( _lx + bmpB ) / bmpC ) ) ;
}
return _lvtrap2;
}
static void _hoc_vtrap2(void) {
double _r;
double* _p; Datum* _ppvar; Datum* _thread; _NrnThread* _nt;
if (_extcall_prop) {_p = _extcall_prop->param; _ppvar = _extcall_prop->dparam;}else{ _p = (double*)0; _ppvar = (Datum*)0; }
_thread = _extcall_thread;
_nt = nrn_threads;
_r = vtrap2 ( _p, _ppvar, _thread, _nt, *getarg(1) );
hoc_retpushx(_r);
}
double vtrap6 ( _threadargsprotocomma_ double _lx ) {
double _lvtrap6;
if ( fabs ( ( _lx + amB ) / amC ) < 1e-6 ) {
_lvtrap6 = amA * amC ;
}
else {
_lvtrap6 = ( amA * ( _lx + amB ) ) / ( 1.0 - Exp ( _threadargscomma_ - ( _lx + amB ) / amC ) ) ;
}
return _lvtrap6;
}
static void _hoc_vtrap6(void) {
double _r;
double* _p; Datum* _ppvar; Datum* _thread; _NrnThread* _nt;
if (_extcall_prop) {_p = _extcall_prop->param; _ppvar = _extcall_prop->dparam;}else{ _p = (double*)0; _ppvar = (Datum*)0; }
_thread = _extcall_thread;
_nt = nrn_threads;
_r = vtrap6 ( _p, _ppvar, _thread, _nt, *getarg(1) );
hoc_retpushx(_r);
}
double vtrap7 ( _threadargsprotocomma_ double _lx ) {
double _lvtrap7;
if ( fabs ( ( _lx + bmB ) / bmC ) < 1e-6 ) {
_lvtrap7 = bmA * bmC ;
}
else {
_lvtrap7 = ( bmA * ( - ( _lx + bmB ) ) ) / ( 1.0 - Exp ( _threadargscomma_ ( _lx + bmB ) / bmC ) ) ;
}
return _lvtrap7;
}
static void _hoc_vtrap7(void) {
double _r;
double* _p; Datum* _ppvar; Datum* _thread; _NrnThread* _nt;
if (_extcall_prop) {_p = _extcall_prop->param; _ppvar = _extcall_prop->dparam;}else{ _p = (double*)0; _ppvar = (Datum*)0; }
_thread = _extcall_thread;
_nt = nrn_threads;
_r = vtrap7 ( _p, _ppvar, _thread, _nt, *getarg(1) );
hoc_retpushx(_r);
}
double vtrap8 ( _threadargsprotocomma_ double _lx ) {
double _lvtrap8;
if ( fabs ( ( _lx + ahB ) / ahC ) < 1e-6 ) {
_lvtrap8 = ahA * ahC ;
}
else {
_lvtrap8 = ( ahA * ( - ( _lx + ahB ) ) ) / ( 1.0 - Exp ( _threadargscomma_ ( _lx + ahB ) / ahC ) ) ;
}
return _lvtrap8;
}
static void _hoc_vtrap8(void) {
double _r;
double* _p; Datum* _ppvar; Datum* _thread; _NrnThread* _nt;
if (_extcall_prop) {_p = _extcall_prop->param; _ppvar = _extcall_prop->dparam;}else{ _p = (double*)0; _ppvar = (Datum*)0; }
_thread = _extcall_thread;
_nt = nrn_threads;
_r = vtrap8 ( _p, _ppvar, _thread, _nt, *getarg(1) );
hoc_retpushx(_r);
}
double Exp ( _threadargsprotocomma_ double _lx ) {
double _lExp;
if ( _lx < - 100.0 ) {
_lExp = 0.0 ;
}
else {
_lExp = exp ( _lx ) ;
}
return _lExp;
}
static void _hoc_Exp(void) {
double _r;
double* _p; Datum* _ppvar; Datum* _thread; _NrnThread* _nt;
if (_extcall_prop) {_p = _extcall_prop->param; _ppvar = _extcall_prop->dparam;}else{ _p = (double*)0; _ppvar = (Datum*)0; }
_thread = _extcall_thread;
_nt = nrn_threads;
_r = Exp ( _p, _ppvar, _thread, _nt, *getarg(1) );
hoc_retpushx(_r);
}
static int _ode_count(int _type){ return 4;}
static void _ode_spec(_NrnThread* _nt, _Memb_list* _ml, int _type) {
double* _p; Datum* _ppvar; Datum* _thread;
Node* _nd; double _v; int _iml, _cntml;
_cntml = _ml->_nodecount;
_thread = _ml->_thread;
for (_iml = 0; _iml < _cntml; ++_iml) {
_p = _ml->_data[_iml]; _ppvar = _ml->_pdata[_iml];
_nd = _ml->_nodelist[_iml];
v = NODEV(_nd);
_ode_spec1 (_p, _ppvar, _thread, _nt);
}}
static void _ode_map(int _ieq, double** _pv, double** _pvdot, double* _pp, Datum* _ppd, double* _atol, int _type) {
double* _p; Datum* _ppvar;
int _i; _p = _pp; _ppvar = _ppd;
_cvode_ieq = _ieq;
for (_i=0; _i < 4; ++_i) {
_pv[_i] = _pp + _slist1[_i]; _pvdot[_i] = _pp + _dlist1[_i];
_cvode_abstol(_atollist, _atol, _i);
}
}
static void _ode_matsol_instance1(_threadargsproto_) {
_ode_matsol1 (_p, _ppvar, _thread, _nt);
}
static void _ode_matsol(_NrnThread* _nt, _Memb_list* _ml, int _type) {
double* _p; Datum* _ppvar; Datum* _thread;
Node* _nd; double _v; int _iml, _cntml;
_cntml = _ml->_nodecount;
_thread = _ml->_thread;
for (_iml = 0; _iml < _cntml; ++_iml) {
_p = _ml->_data[_iml]; _ppvar = _ml->_pdata[_iml];
_nd = _ml->_nodelist[_iml];
v = NODEV(_nd);
_ode_matsol_instance1(_threadargs_);
}}
static void initmodel(double* _p, Datum* _ppvar, Datum* _thread, _NrnThread* _nt) {
int _i; double _save;{
h = h0;
m = m0;
mp = mp0;
s = s0;
{
q10_1 = pow( 2.2 , ( ( celsius - 20.0 ) / 10.0 ) ) ;
q10_2 = pow( 2.9 , ( ( celsius - 20.0 ) / 10.0 ) ) ;
q10_3 = pow( 3.0 , ( ( celsius - 36.0 ) / 10.0 ) ) ;
evaluate_fct ( _threadargscomma_ v ) ;
mp = mp_inf ;
m = m_inf ;
h = h_inf ;
s = s_inf ;
}
}
}
static void nrn_init(_NrnThread* _nt, _Memb_list* _ml, int _type){
double* _p; Datum* _ppvar; Datum* _thread;
Node *_nd; double _v; int* _ni; int _iml, _cntml;
#if CACHEVEC
_ni = _ml->_nodeindices;
#endif
_cntml = _ml->_nodecount;
_thread = _ml->_thread;
for (_iml = 0; _iml < _cntml; ++_iml) {
_p = _ml->_data[_iml]; _ppvar = _ml->_pdata[_iml];
#if CACHEVEC
if (use_cachevec) {
_v = VEC_V(_ni[_iml]);
}else
#endif
{
_nd = _ml->_nodelist[_iml];
_v = NODEV(_nd);
}
v = _v;
initmodel(_p, _ppvar, _thread, _nt);
}
}
static double _nrn_current(double* _p, Datum* _ppvar, Datum* _thread, _NrnThread* _nt, double _v){double _current=0.;v=_v;{ {
inap = gnapbar * mp * mp * mp * ( v - ena ) ;
ina = gnabar * m * m * m * h * ( v - ena ) ;
ik = gkbar * s * ( v - ek ) ;
il = gl * ( v - el ) ;
}
_current += ina;
_current += inap;
_current += ik;
_current += il;
} return _current;
}
static void nrn_cur(_NrnThread* _nt, _Memb_list* _ml, int _type) {
double* _p; Datum* _ppvar; Datum* _thread;
Node *_nd; int* _ni; double _rhs, _v; int _iml, _cntml;
#if CACHEVEC
_ni = _ml->_nodeindices;
#endif
_cntml = _ml->_nodecount;
_thread = _ml->_thread;
for (_iml = 0; _iml < _cntml; ++_iml) {
_p = _ml->_data[_iml]; _ppvar = _ml->_pdata[_iml];
#if CACHEVEC
if (use_cachevec) {
_v = VEC_V(_ni[_iml]);
}else
#endif
{
_nd = _ml->_nodelist[_iml];
_v = NODEV(_nd);
}
_g = _nrn_current(_p, _ppvar, _thread, _nt, _v + .001);
{ _rhs = _nrn_current(_p, _ppvar, _thread, _nt, _v);
}
_g = (_g - _rhs)/.001;
#if CACHEVEC
if (use_cachevec) {
VEC_RHS(_ni[_iml]) -= _rhs;
}else
#endif
{
NODERHS(_nd) -= _rhs;
}
}
}
static void nrn_jacob(_NrnThread* _nt, _Memb_list* _ml, int _type) {
double* _p; Datum* _ppvar; Datum* _thread;
Node *_nd; int* _ni; int _iml, _cntml;
#if CACHEVEC
_ni = _ml->_nodeindices;
#endif
_cntml = _ml->_nodecount;
_thread = _ml->_thread;
for (_iml = 0; _iml < _cntml; ++_iml) {
_p = _ml->_data[_iml];
#if CACHEVEC
if (use_cachevec) {
VEC_D(_ni[_iml]) += _g;
}else
#endif
{
_nd = _ml->_nodelist[_iml];
NODED(_nd) += _g;
}
}
}
static void nrn_state(_NrnThread* _nt, _Memb_list* _ml, int _type) {
double* _p; Datum* _ppvar; Datum* _thread;
Node *_nd; double _v = 0.0; int* _ni; int _iml, _cntml;
#if CACHEVEC
_ni = _ml->_nodeindices;
#endif
_cntml = _ml->_nodecount;
_thread = _ml->_thread;
for (_iml = 0; _iml < _cntml; ++_iml) {
_p = _ml->_data[_iml]; _ppvar = _ml->_pdata[_iml];
_nd = _ml->_nodelist[_iml];
#if CACHEVEC
if (use_cachevec) {
_v = VEC_V(_ni[_iml]);
}else
#endif
{
_nd = _ml->_nodelist[_iml];
_v = NODEV(_nd);
}
v=_v;
{
{ states(_p, _ppvar, _thread, _nt);
}}}
}
static void terminal(){}
static void _initlists(){
double _x; double* _p = &_x;
int _i; static int _first = 1;
if (!_first) return;
_slist1[0] = &(mp) - _p; _dlist1[0] = &(Dmp) - _p;
_slist1[1] = &(m) - _p; _dlist1[1] = &(Dm) - _p;
_slist1[2] = &(h) - _p; _dlist1[2] = &(Dh) - _p;
_slist1[3] = &(s) - _p; _dlist1[3] = &(Ds) - _p;
_first = 0;
}
#if defined(__cplusplus)
} /* extern "C" */
#endif
