MultiScale Optimized Neuronal Intramembrane Cavitation (SONIC) model (Lemaire et al. 2019)

 Download zip file 
Help downloading and running models
Accession:264539
Jupyter Notebooks to reproduce data and figures of the SONIC paper (Lemaire et al. 2019) describing a computationally efficient variant to simulate ultrasound neuromodulation by intramembrane cavitation in cortical neurons.
Reference:
1 . Lemaire T, Neufeld E, Kuster N, Micera S (2019) Understanding ultrasound neuromodulation using a computationally efficient and interpretable model of intramembrane cavitation. J Neural Eng 16:046007 [PubMed]
Model Information (Click on a link to find other models with that property)
Model Type:
Brain Region(s)/Organism:
Cell Type(s): Subthalamic nucleus principal GABA cell; Neocortex spiking regular (RS) neuron; Neocortex fast spiking (FS) interneuron; Neocortex spiking low threshold (LTS) neuron;
Channel(s):
Gap Junctions:
Receptor(s):
Gene(s):
Transmitter(s):
Simulation Environment: Python; NEURON;
Model Concept(s): Action Potentials;
Implementer(s):
Search NeuronDB for information about:  Subthalamic nucleus principal GABA cell;
MIT License

Copyright (c) 2018 TNE lab, EPFL

Permission is hereby granted, free of charge, to any person obtaining a copy
of this software and associated documentation files (the "Software"), to deal
in the Software without restriction, including without limitation the rights
to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
copies of the Software, and to permit persons to whom the Software is
furnished to do so, subject to the following conditions:

The above copyright notice and this permission notice shall be included in all
copies or substantial portions of the Software.

THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
SOFTWARE.

Loading data, please wait...