Neuromusculoskeletal modeling with neural and finite element models (Volk et al, 2021)

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Accession:267184
"In this study, we present a predictive NMS model that uses an embedded neural architecture within a finite element (FE) framework to simulate muscle activation. A previously developed neuromuscular model of a motor neuron was embedded into a simple FE musculoskeletal model. Input stimulation profiles from literature were simulated in the FE NMS model to verify effective integration of the software platforms. Motor unit recruitment and rate coding capabilities of the model were evaluated. The integrated model reproduced previously published output muscle forces with an average error of 0.0435 N. The integrated model effectively demonstrated motor unit recruitment and rate coding in the physiological range based upon motor unit discharge rates and muscle force output."
Reference:
1 . Volk VL, Hamilton LD, Hue DR, Shelburne KB, Fitzpatrick CK (2021) Integration of neural architecture within a finite element framework for improved neuromusculoskeletal modeling Scientific Reports 11:22983
Model Information (Click on a link to find other models with that property)
Model Type: Neuromuscular Junction;
Brain Region(s)/Organism: Spinal motoneuron;
Cell Type(s): Spinal cord motor neuron slow twitch;
Channel(s): I CAN; I K; I K,Ca; I Calcium; I Na,p;
Gap Junctions:
Receptor(s):
Gene(s):
Transmitter(s):
Simulation Environment: NEURON; NetPyNE; FORTRAN;
Model Concept(s): Multiscale; Rate-coding model neurons; Motor control;
Implementer(s):
Search NeuronDB for information about:  I Na,p; I K; I K,Ca; I CAN; I Calcium;
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NetPyNE Model
README.md
Ca_conc.mod
CaL.mod
CaN.mod
KCa.mod
KDr.mod
module1_2.mod
module3.mod
mStepIClamp.mod
Naf.mod
Nap.mod
RampIClamp.mod
RampIClampNoise.mod
Xm.mod
.gitattributes
add_hil_is.hoc
add_muscle_unit.hoc
add_pics_istim.hoc
BONE_FOOT.inp
BONE_TIBIA.inp
CART_CONTACT.inp
CARTILAGE_PROPS.inp
CARTILAGE_TALUS.inp
CARTILAGE_TIBIA.inp
CONTACT_INCLUSIONS.inp
fixnseg.hoc
force_pkl_file.py
JOINT_CONFIGURATION.inp
Kim_Model.py
Kim_Model_restore.py
MAIN-NETPYNE-S1S2.inp
MAIN-NETPYNE-S3.inp
MAIN-NEURON.inp
mem_mechanism_acti.hoc
mem_mechanism_muscle.hoc
mem_mechanism_pass.hoc
motor_unit_template.hoc
motor_unit_template_1.hoc
motor_unit_template_10.hoc
motor_unit_template_100.hoc
motor_unit_template_101.hoc
motor_unit_template_102.hoc
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motor_unit_template_98.hoc
motor_unit_template_99.hoc
MUSC_SOLEUS.inp
MUSC_TIB_ANT.inp
network_model_310MUs.py
PROPS_BONES_FOOT.inp
PROPS_BONES_TIBIA.inp
restore_state.hoc
save_state.hoc
spk_index_output.txt
v_e_moto6_export.hoc
vuamp-netpyne.f
vuamp-neuron.f
Xm.hoc
xm_tracker.txt
                            
Changelog:

2023-02-06 Fix 9.0.0 error: <var> used as both variable and function in file module1_2.mod

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