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Koch C (1999) Biophysics Of Computation: Information Processing in Single Neurons

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Arhem P, Klement G, Blomberg C (2006) Channel density regulation of firing patterns in a cortical neuron model. Biophys J 90:4392-404 [PubMed]

Arsiero M, Luscher HR, Lundstrom BN, Giugliano M (2007) The Impact of Input Fluctuations on the Frequency-Current Relationships of Layer 5 Pyramidal Neurons in the Rat Medial Prefrontal Cortex. J Neurosci 27(12):3274-3284 [Journal] [PubMed]

   Input Fluctuations effects on f-I curves (Arsiero et al. 2007) [Model]

Azouz R (2005) Dynamic spatiotemporal synaptic integration in cortical neurons: neuronal gain, revisited. J Neurophysiol 94:2785-96 [PubMed]

Badel L, Lefort S, Brette R, Petersen CC, Gerstner W, Richardson MJ (2007) Dynamic I-V curves are reliable predictors of naturalistic pyramidal-neuron voltage traces. J Neurophysiol 99(2):656-66 [PubMed]

Bar-Yehuda D, Korngreen A (2008) Space clamp problems when voltage clamping neurons expressing voltage-gated conductances. J Neurophysiol 99(3):1127-33 [Journal] [PubMed]

   Space clamp problems in neurons with voltage-gated conductances (Bar-Yehuda and Korngreen 2008) [Model]

Baras D, Meir R (2007) Reinforcement learning, spike-time-dependent plasticity, and the BCM rule. Neural Comput 19:2245-79 [PubMed]

Bartolozzi C, Indiveri G (2007) Synaptic dynamics in analog VLSI. Neural Comput 19:2581-603 [PubMed]

Bedard C, Kroger H, Destexhe A (2004) Modeling extracellular field potentials and the frequency-filtering properties of extracellular space. Biophys J 86:1829-42 [Journal] [PubMed]

   Modeling local field potentials (Bedard et al. 2004) [Model]

Bellinger SC, Miyazawa G, Steinmetz PN (2008) Submyelin potassium accumulation may functionally block subsets of local axons during deep brain stimulation: a modeling study. J Neural Eng 5:263-74 [Journal] [PubMed]

   Submyelin Potassium accumulation in Subthalamic neuron (STN) axons (Bellinger et al. 2008) [Model]

Berends M, Maex R, De Schutter E (2005) The effect of NMDA receptors on gain modulation. Neural Comput 17:2531-47 [PubMed]

Bianchi D, Marasco A, Limongiello A, Marchetti C, Marie H, Tirozzi B, Migliore M (2012) On the mechanisms underlying the depolarization block in the spiking dynamics of CA1 pyramidal neurons J Comput. Neurosci. 33:207-25 [Journal] [PubMed]

   CA1 pyramidal neuron: depolarization block (Bianchi et al. 2012) [Model]

Breen BJ, Gerken WC, Butera RJ (2003) Hybrid integrate-and-fire model of a bursting neuron. Neural Comput 15:2843-62 [PubMed]

Buhmann JM, Lange T, Ramacher U (2005) Image segmentation by networks of spiking neurons. Neural Comput 17:1010-31 [PubMed]

Bui TV, Dewey DE, Fyffe RE, Rose PK (2005) Comparison of the inhibition of Renshaw cells during subthreshold and suprathreshold conditions using anatomically and physiologically realistic models. J Neurophysiol 94:1688-98 [Journal] [PubMed]

   Proximal inhibition of Renshaw cells (Bui et al 2005) [Model]

Cai D, Rangan AV, McLaughlin DW (2005) Architectural and synaptic mechanisms underlying coherent spontaneous activity in V1. Proc Natl Acad Sci U S A 102:5868-73 [PubMed]

Cai Y, Baxter DA, Crow T (2003) Computational study of enhanced excitability in Hermissenda: membrane conductances modulated by 5-HT. J Comput Neurosci 15:105-21 [Journal] [PubMed]

   Enhanced Excitability in Hermissenda: modulation by 5-HT (Cai et al 2003) [Model]

Cannon RC, O`Donnell C, Nolan MF (2010) Stochastic ion channel gating in dendritic neurons: morphology dependence and probabilistic synaptic activation of dendritic spikes. PLoS Comput Biol [Journal] [PubMed]

   Stochastic ion channels and neuronal morphology (Cannon et al. 2010) [Model]

Caplan JS, Williams AH, Marder E (2014) Many parameter sets in a multicompartment model oscillator are robust to temperature perturbations J Neurosci. 34(14):496-75 [Journal] [PubMed]

   Temperature-Dependent Pyloric Pacemaker Kernel (Caplan JS et al., 2014) [Model]

Carrillo RR, Ros E, Barbour B, Boucheny C, Coenen O (2006) Event-driven simulation of neural population synchronization facilitated by electrical coupling. Biosystems 87(2-3):275-80 [Journal] [PubMed]

Cassara AM, Maraviglia B (2008) Microscopic investigation the resonant mechanism for the implementation of nc-MRI at Ultra-Low Field NeuroImage 41(4):1228-41 [Journal]

   CA1 pyramidal neuron: calculation of MRI signals (Cassara et al. 2008) [Model]

Cataldo E, Brunelli M, Byrne JH, Av-Ron E, Cai Y, Baxter DA (2005) Computational Model of Touch Sensory Cells (T Cells) of the Leech: Role of the Afterhyperpolarization (AHP) in Activity-Dependent Conduction Failure Journal of Computational Neuroscience 18:5-24 [Journal] [PubMed]

   Touch Sensory Cells (T Cells) of the Leech (Cataldo et al. 2004) (Scuri et al. 2007) [Model]

Cecchi GA, Petreanu LT, Alvarez-Buylla A, Magnasco MO (2001) Unsupervised Learning and Adaptation in a Model of Adult Neurogenesis J Comput Neurosci 11:175-182 [Journal]

Chacron MJ, Lindner B, Longtin A (2007) Threshold fatigue and information transfer. J Comput Neurosci 23:301-11 [Journal] [PubMed]

Chao TC, Chen CM (2005) Learning-Induced Synchronization and Plasticity of a Developing Neural Network J Comp Neurosci 19:311-324 [Journal]

Colbert CM, Pan E (2002) Ion channel properties underlying axonal action potential initiation in pyramidal neurons. Nat Neurosci 5:533-8 [PubMed]

Cox SJ, Griffith BE (2001) Recovering Quasi-Active Properties of Dendritic Neurons from Dual Potential Recordings J Comput Neurosci 11:95-110 [Journal]

D'Angelo E, Nieus T, Maffei A, Armano S, Rossi P, Taglietti V, Fontana A, Naldi G (2001) Theta-frequency bursting and resonance in cerebellar granule cells: experimental evidence and modeling of a slow k+-dependent mechanism. J Neurosci 21:759-70 [PubMed]

   Bursting and resonance in cerebellar granule cells (D'Angelo et al. 2001) [Model]

Dasika VK, White JA, Colburn HS (2007) Simple models show the general advantages of dendrites in coincidence detection. J Neurophysiol 97:3449-59 [PubMed]

Desjardins AE, Li YX, Reinker S, Miura RM, Neuman RS (2003) The Influences of Ih on Temporal Summation in Hippocampal CA1 Pyramidal Neurons: A Modeling Study. J Comput Neurosci 15:131-42 [Journal] [PubMed]

Destexhe A, Rudolph M (2004) Extracting information from the power spectrum of synaptic noise. J Comput Neurosci 17:327-45 [Journal] [PubMed]

Diwakar S, Lombardo P, Solinas S, Naldi G, D`Angelo E (2011) Local field potential modeling predicts dense activation in cerebellar granule cells clusters under LTP and LTD control PLoS ONE 6(7):e21928 [Journal]

   Reconstructing cerebellar granule layer evoked LFP using convolution (ReConv) (Diwakar et al. 2011) [Model]

Diwakar S, Magistretti J, Goldfarb M, Naldi G, D`Angelo E (2009) Axonal Na+ channels ensure fast spike activation and back-propagation in cerebellar granule cells J Neurophysiol 101(2):519-32 [Journal] [PubMed]

   Multicompartmental cerebellar granule cell model (Diwakar et al. 2009) [Model]

Dragly SA, Hobbi Mobarhan M, Våvang Solbrå A, Tennøe S, Hafreager A, Malthe-Sørenssen A, Fyhn M, Hafting T, Einevoll GT (2017) Neuronify: An Educational Simulator for Neural Circuits. eNeuro [Journal] [PubMed]

   Neuronify: An Educational Simulator for Neural Circuits (Dragly et al 2017) [Model]

Dudman JT, Nolan MF (2009) Stochastically gating ion channels enable patterned spike firing through activity-dependent modulation of spike probability. PLoS Comput Biol 5:e1000290 [Journal] [PubMed]

Edin F, Machens CK, Schutze H, Herz AV (2004) Searching for optimal sensory signals: iterative stimulus reconstruction in closed-loop experiments. J Comput Neurosci 17:47-56 [Journal] [PubMed]

Ellis LD, Krahe R, Bourque CW, Dunn RJ, Chacron MJ (2007) Muscarinic receptors control frequency tuning through the downregulation of an A-type potassium current. J Neurophysiol : [PubMed]

Ermentrout GB, Terman DH (2010) Mathematical Foundations of Neuroscience Interdisciplinary Applied Mathematics, Antman SS:Marsden JE:Sirovich L:Wiggins, ed. pp.1 [Journal]

   Mathematical Foundations of Neuroscience (Ermentrout and Terman 2010) [Model]

Feng J, Brown D (2004) Decoding input signals in time domain--a model approach. J Comput Neurosci 16:237-49 [Journal] [PubMed]

Feng J, Li G (2002) Impact of geometrical structures on the output of neuronal models: a theoretical and numerical analysis. Neural Comput 14:621-40 [PubMed]

Feng J, Zhang P (2001) Behavior of integrate-and-fire and Hodgkin-Huxley models with correlated inputs. art. no. 051902 Phys Rev E Stat Phys Plasmas Fluids Relat Interdiscip Topics 63:1902-1912 [Journal] [PubMed]

Frohlich F, Jezernik S (2004) Annihilation of Single Cell Neural Oscillations by Feedforward and Feedback Control J Comput Neurosci 17:165-178 [Journal]

Gabbiani F, Cox SJ (2010) Mathematics for Neuroscientists :1-486 [Journal]

   Mathematics for Neuroscientists (Gabbiani and Cox 2010) [Model]

Gabbiani F, Krapp HG (2006) Spike-frequency adaptation and intrinsic properties of an identified, looming-sensitive neuron. J Neurophysiol 96:2951-62 [Journal] [PubMed]

   Leaky integrate-and-fire model of spike frequency adaptation in the LGMD (Gabbiani and Krapp 2006) [Model]

Garci­a-Grajales JA, Rucabado G, Garci­a-Dopico A, Pena JM, Jerusalem A (2015) Neurite, a Finite Difference Large Scale Parallel Program for the Simulation of Electrical Signal Propagation in Neurites under Mechanical Loading. PLoS One 10(2):e0116532 [Journal] [PubMed]

   Neurite: electrophysiological-mechanical coupling simulation framework (Garcia-Grajales et al 2015) [Model]

Gloveli T, Dugladze T, Rotstein HG, Traub RD, Monyer H, Heinemann U, Whittington MA, Kopell N (2005) Orthogonal arrangement of rhythm-generating microcircuits in the hippocampus. Proc Natl Acad Sci U S A 102:13295-300 [Journal] [PubMed]

   Gamma and theta rythms in biophysical models of hippocampus circuits (Kopell et al. 2011) [Model]

Gold C, Henze DA, Koch C (2007) Using Extracellular Action Potential Recordings to Tune Compartmental Models. Journal of Computational Neuroscience 23:39-58 [Journal] [PubMed]

   Extracellular Action Potential Simulations (Gold et al 2007) [Model]

Gold C, Henze DA, Koch C, Buzsaki G (2006) On the origin of the extracellular action potential waveform: A modeling study. J Neurophysiol 95:3113-28 [Journal] [PubMed]

   Extracellular Action Potential Simulations (Gold et al 2007) [Model]

Grau-Serrat V, Carr CE, Simon JZ (2003) Modeling coincidence detection in nucleus laminaris. Biol Cybern 89:388-96 [PubMed]

Grunditz A, Holbro N, Tian L, Zuo Y, Oertner TG (2008) Spine Neck Plasticity Controls Postsynaptic Calcium Signals through Electrical Compartmentalization J Neurosci 28(50):13457-13466 [Journal] [PubMed]

   Spine neck plasticity controls postsynaptic calcium signals (Grunditz et al. 2008) [Model]

Halnes G, Mäki-Marttunen T, Keller D, Pettersen KH, Andreassen OA, Einevoll GT (2016) Effect of Ionic Diffusion on Extracellular Potentials in Neural Tissue PLoS Comput Biol 12:e1005193 [Journal] [PubMed]

   Effect of ionic diffusion on extracellular potentials (Halnes et al 2016) [Model]

Halnes G, Ostby I, Pettersen KH, Omholt SW, Einevoll GT (2013) Electrodiffusive model for astrocytic and neuronal ion concentration dynamics. PLoS Comput Biol 9:e1003386 [Journal] [PubMed]

   Electrodiffusive astrocytic and extracellular ion concentration dynamics model (Halnes et al. 2013) [Model]

Hao J, Wang XD, Dan Y, Poo MM, Zhang XH (2009) An arithmetic rule for spatial summation of excitatory and inhibitory inputs in pyramidal neurons. Proc Natl Acad Sci U S A 106:21906-11 [Journal] [PubMed]

   Spatial summation of excitatory and inhibitory inputs in pyramidal neurons (Hao et al. 2010) [Model]

Hausser M, Major G, Stuart GJ (2001) Differential shunting of EPSPs by action potentials. Science 291:138-41 [PubMed]

Helmstaedter M, Sakmann B, Feldmeyer D (2009) The Relation between Dendritic Geometry, Electrical Excitability, and Axonal Projections of L2-3 Interneurons in Rat Barrel Cortex. Cereb Cortex 19:938-950 [Journal] [PubMed]

   Axonal Projection and Interneuron Types (Helmstaedter et al. 2008) [Model]

Herrmann A, Gerstner W (2001) Noise and the PSTH response to current transients: I. General theory and application to the integrate-and-fire neuron. J Comput Neurosci 11:135-51 [Journal] [PubMed]

Higley MJ, Contreras D (2006) Balanced excitation and inhibition determine spike timing during frequency adaptation. J Neurosci 26:448-57 [PubMed]

Hoshino O (2007) Enhanced sound perception by widespread-onset neuronal responses in auditory cortex. Neural Comput 19:3310-34 [PubMed]

Huang S, Hong S, De Schutter E (2015) Non-linear leak currents affect mammalian neuron physiology. Front Cell Neurosci 9:432 [Journal] [PubMed]

   Concentration dependent nonlinear K+ and Cl- leak current (Huang et al. 2015) [Model]

Huys QJ, Ahrens MB, Paninski L (2006) Efficient estimation of detailed single-neuron models. J Neurophysiol 96:872-90 [Journal] [PubMed]

   Efficient estimation of detailed single-neuron models (Huys et al. 2006) [Model]

Huys QJ, Paninski L (2009) Smoothing of, and parameter estimation from, noisy biophysical recordings. PLoS Comput Biol 5:e1000379-80 [Journal] [PubMed]

   Smoothing of, and parameter estimation from, noisy biophysical recordings (Huys & Paninski 2009) [Model]

Jacobson GA, Diba K, Yaron-Jakoubovitch A, Oz Y, Koch C, Segev I, Yarom Y (2005) Subthreshold voltage noise of rat neocortical pyramidal neurones. J Physiol 564:145-60 [PubMed]

Jaffe DB, Carnevale NT (1999) Passive normalization of synaptic integration influenced by dendritic architecture. J Neurophysiol 82:3268-85 [Journal] [PubMed]

Johansson C, Lansner A (2007) Towards cortex sized artificial neural systems. Neural Netw 20:48-61 [PubMed]

Kitano K, Fukai T (2007) Variability v.s. synchronicity of neuronal activity in local cortical network models with different wiring topologies. J Comput Neurosci 23:237-50 [Journal] [PubMed]

Kobayashi R, Tsubo Y, Shinomoto S (2009) Made-to-order spiking neuron model equipped with a multi-timescale adaptive threshold. Front Comput Neurosci 3:9 [Journal] [PubMed]

   Multi-timescale adaptive threshold model (Kobayashi et al 2009) [Model]
   Multi-timescale adaptive threshold model (Kobayashi et al 2009) (NEURON) [Model]

Kosmidis EK, Pakdaman K (2003) An Analysis of the Reliability Phenomenon in the FitzHugh-Nagumo Model Journal of Computational Neuroscience 14:5-22 [Journal]

Kretzberg J, Egelhaaf M, Warzecha AK (2001) Membrane potential fluctuations determine the precision of spike timing and synchronous activity: a model study. J Comput Neurosci 10:79-97 [Journal] [PubMed]

Laing CR (2006) On the application of ”equation-free modelling” to neural systems. J Comput Neurosci 20:5-23 [Journal] [PubMed]

Laing CR, Doiron B, Longtin A, Noonan L, Turner RW, and Maler L (2003) Type I Burst Excitability Journal of Computational Neuroscience 14:329-342 [Journal]

Laing CR, Longtin A (2003) Dynamics of deterministic and stochastic paired excitatory-inhibitory delayed feedback. Neural Comput 15:2779-822 [PubMed]

Lansky P, Sanda P, He J (2006) The parameters of the stochastic leaky integrate-and-fire neuronal model. J Comput Neurosci 21:211-23 [Journal] [PubMed]

Liu YH, Wang XJ (2001) Spike-Frequency Adaptation of a Generalized Leaky Integrate-and-Fire Model Neuron J Comput Neurosci 10:25-45 [Journal]

London M, Meunier C, Segev I (1999) Signal transfer in passive dendrites with nonuniform membrane conductance. J Neurosci 19:8219-33 [PubMed]

Longtin A, Doiron B, Bulsara AR (2003) Noise-induced divisive gain control in neuron models. Biosystems 67:147-56 [PubMed]

Lovelace JJ, Cios KJ (2008) A very simple spiking neuron model that allows for modeling of large, complex systems. Neural Comput 20:65-90 [PubMed]

Markaki M, Orphanoudakis S, Poirazi P (2005) Modelling reduced excitability in aged CA1 neurons as a calcium-dependent process Neurocomputing 65-66:305-314 [Journal]

   Modelling reduced excitability in aged CA1 neurons as a Ca-dependent process (Markaki et al. 2005) [Model]

Masoli S, Solinas S, D'Angelo E (2015) Action potential processing in a detailed Purkinje cell model reveals a critical role for axonal compartmentalization. Front Cell Neurosci 9:47 [Journal] [PubMed]

   A detailed Purkinje cell model (Masoli et al 2015) [Model]

Masuda N, Aihara K (2003) Duality of rate coding and temporal coding in multilayered feedforward networks. Neural Comput 15:103-25 [PubMed]

Mazza M, De Pinho M, Piqueira JB, Roque AC (2004) A Dynamical Model of Fast Cortical Reorganization Journal of Computational Neuroscience 16:177-201 [Journal]

Mehaffey WH, Doiron B, Maler L, Turner RW (2005) Deterministic multiplicative gain control with active dendrites. J Neurosci 25:9968-77 [PubMed]

Mensi S, Naud R, Pozzorini C, Avermann M, Petersen CC, Gerstner W (2012) Parameter Extraction and Classification of Three Cortical Neuron Types Reveals Two Distinct Adaptation Mechanisms J Neurophysiol 107(6):1756-1775 [Journal] [PubMed]

   Extraction and classification of three cortical neuron types (Mensi et al. 2012) [Model]

Meuth P, Meuth SG, Jacobi D, Broicher T, Pape HC, Budde T (2005) Get the Rhythm: Modeling Neuronal Activity Journal of Undergraduate Neuroscience Education (JUNE) 4(1):A1-A11 [Journal] [PubMed]

   Thalamic neuron: Modeling rhythmic neuronal activity (Meuth et al. 2005) [Model]

Miura K, Optican LM (2006) Membrane channel properties of premotor excitatory burst neurons may underlie saccade slowing after lesions of omnipause neurons J Comp Neurosci 20:25-41 [Journal]

Mo CH, Gu M, Koch C (2004) A learning rule for local synaptic interactions between excitation and shunting inhibition. Neural Comput 16:2507-32 [PubMed]

Morita K, Okada M, Aihara K (2007) Selectivity and stability via dendritic nonlinearity. Neural Comput 19:1798-853 [PubMed]

Morrison A, Mehring C, Geisel T, Aertsen AD, Diesmann M (2005) Advancing the boundaries of high-connectivity network simulation with distributed computing. Neural Comput 17:1776-801 [PubMed]

Muller E, Buesing L, Schemmel J, Meier K (2007) Spike-frequency adapting neural ensembles: beyond mean adaptation and renewal theories. Neural Comput 19:2958-3010 [PubMed]

Murphy BK, Miller KD (2003) Multiplicative gain changes are induced by excitation or inhibition alone. J Neurosci 23:10040-51 [PubMed]

Ness TV, Remme MW, Einevoll GT (2016) Active subthreshold dendritic conductances shape the local field potential. J Physiol 594:3809-25 [Journal] [PubMed]

Norenberg A, Hu H, Vida I, Bartos M, Jonas P (2010) Distinct nonuniform cable properties optimize rapid and efficient activation of fast-spiking GABAergic interneurons. Proc Natl Acad Sci U S A 107:894-9 [Journal] [PubMed]

   Detailed passive cable model of Dentate Gyrus Basket Cells (Norenberg et al. 2010) [Model]

Omurtag A, Lytton WW (2010) Spectral method and high-order finite differences for the nonlinear cable equation. Neural Comput 22:2113-36 [Journal] [PubMed]

   Spectral method and high-order finite differences for nonlinear cable (Omurtag and Lytton 2010) [Model]

Paninski L (2006) The spike-triggered average of the integrate-and-fire cell driven by gaussian white noise. Neural Comput 18:2592-616 [PubMed]

Paninski L, Pillow JW, Simoncelli EP (2004) Maximum likelihood estimation of a stochastic integrate-and-fire neural encoding model. Neural Comput 16:2533-61 [PubMed]

Parisien C, Anderson CH, Eliasmith C (2008) Solving the problem of negative synaptic weights in cortical models. Neural Comput 20:1473-94 [Journal] [PubMed]

Pashut T, Wolfus S, Friedman A, Lavidor M, Bar-Gad I, Yeshurun Y, Korngreen A (2011) Mechanisms of Magnetic Stimulation of Central Nervous System Neurons. PLoS Comput Biol 7(3):e1002022 [Journal]

   Mechanisms of magnetic stimulation of central nervous system neurons (Pashut et al. 2011) [Model]

Peron SP, Krapp HG, Gabbiani F (2007) Influence of electrotonic structure and synaptic mapping on the receptive field properties of a collision detecting neuron. J Neurophysiol 97:159-177 [PubMed]

Platkiewicz J, Brette R (2010) A threshold equation for action potential initiation. PLoS Comput Biol 6:e1000850 [Journal] [PubMed]

   A threshold equation for action potential initiation (Platkiewicz & Brette 2010) [Model]

Rangan AV, Cai D (2007) Fast numerical methods for simulating large-scale integrate-and-fire neuronal networks. J Comput Neurosci 22:81-100 [Journal] [PubMed]

Rao RP (2004) Bayesian computation in recurrent neural circuits. Neural Comput 16:1-38 [PubMed]

Rotstein HG, Oppermann T, White JA, Kopell N (2006) The dynamic structure underlying subthreshold oscillatory activity and the onset of spikes in a model of medial entorhinal cortex stellate cells. J Comput Neurosci 21:271-92 [Journal] [PubMed]

Rudolph M, Destexhe A (2003) Characterization of subthreshold voltage fluctuations in neuronal membranes. Neural Comput 15:2577-618 [PubMed]

Rudolph M, Destexhe A (2003) A fast-conducting, stochastic integrative mode for neocortical neurons in vivo. J Neurosci 23:2466-76 [PubMed]

Rudolph M, Destexhe A (2006) Analytical Integrate-and-Fire Neuron Models with Conductance-Based Dynamics for Event-Driven Simulation Strategies. Neural Comput 18:2146-210 [PubMed]

Salinas E, Sejnowski TJ (2001) Correlated neuronal activity and the flow of neural information. Nat Rev Neurosci 2:539-50 [PubMed]

Saudargiene A, Porr B, Worgotter F (2004) How the shape of pre- and postsynaptic signals can influence STDP: a biophysical model. Neural Comput 16:595-625 [PubMed]

Schaefer AT, Helmstaedter M, Sakmann B, Korngreen A (2003) Correction of conductance measurements in non-space-clamped structures: 1. Voltage-gated k(+) channels. Biophys J 84:3508-28 [PubMed]

   Correcting space clamp in dendrites (Schaefer et al. 2003 and 2007) [Model]

Segev I, London M (2000) Untangling dendrites with quantitative models. Science 290:744-50 [PubMed]

Shai AS, Anastassiou CA, Larkum ME, Koch C (2015) Physiology of layer 5 pyramidal neurons in mouse primary visual cortex: coincidence detection through bursting. PLoS Comput Biol 11:e1004090 [Journal] [PubMed]

   Layer 5 Pyramidal Neuron (Shai et al., 2015) [Model]

Shao J, Lai D, Meyer U, Luksch H, Wessel R (2009) Generating oscillatory bursts from a network of regular spiking neurons without inhibition J. Comp. Neurosci. 27:591-606 [Journal] [PubMed]

   Generating oscillatory bursts from a network of regular spiking neurons (Shao et al. 2009) [Model]

Shapiro BE (2001) Osmotic forces and gap junctions in spreading depression: a computational model. J Comput Neurosci 10:99-120 [Journal] [PubMed]

Shelley M, McLaughlin D, Shapley R, Wielaard J (2002) States of high conductance in a large-scale model of the visual cortex. J Comput Neurosci 13:93-109 [Journal] [PubMed]

Shelley MJ, Tao L (2001) Efficient and accurate time-stepping schemes for integrate-and-fire neuronal networks. J Comput Neurosci 11:111-9 [Journal] [PubMed]

Sim CK, Forger DB (2007) Modeling the electrophysiology of suprachiasmatic nucleus neurons. J Biol Rhythms 22:445-53 [PubMed]

Singh R, Eliasmith C (2006) Higher-dimensional neurons explain the tuning and dynamics of working memory cells. J Neurosci 26:3667-78 [Journal] [PubMed]

Solinas S, Forti L, Cesana E, Mapelli J, De Schutter E, D`Angelo E (2007) Computational reconstruction of pacemaking and intrinsic electroresponsiveness in cerebellar golgi cells. Front. Cell. Neurosci. 1:2:1-12 [Journal] [PubMed]

   Cerebellar Golgi cell (Solinas et al. 2007a, 2007b) [Model]

Solinas S, Forti L, Cesana E, Mapelli J, De Schutter E, D`Angelo E (2007) Fast-reset of pacemaking and theta-frequency resonance patterns in cerebellar golgi cells: Simulations of their impact in vivo. Front. Cell. Neurosci. 1:4:1-9 [Journal] [PubMed]

   Cerebellar Golgi cell (Solinas et al. 2007a, 2007b) [Model]

Sripati AP, Johnson KO (2006) Dynamic Gain Changes During Attentional Modulation Neural Comput 18(8):1847-1867

Steinmetz PN, Manwani A, Koch C, London M, Segev I (2001) Subthreshold voltage noise due to channel fluctuations in active neuronal membranes. J Comput Neurosci 9:133-48 [Journal] [PubMed]

Takahata M, Takashima A, Hikosaka R (2004) Information processing by nonspiking interneurons: passive and active properties of dendritic membrane determine synaptic integration. Biosystems 58:143-9 [PubMed]

   Synaptic integration of an identified nonspiking interneuron in crayfish (Takashima et al 2006) [Model]

Takashima A, Hikosaka R, Takahata M (2006) Functional Significance of Passive and Active Dendritic Properties in the Synaptic Integration by an Identified Nonspiking Interneuron of Crayfish. J Neurophysiol 96(6):3157-69 [Journal] [PubMed]

   Synaptic integration of an identified nonspiking interneuron in crayfish (Takashima et al 2006) [Model]

Tamosiunaite M, Porr B, Worgotter F (2007) Self-influencing synaptic plasticity: Recurrent changes of synaptic weights can lead to specific functional properties. J Comput Neurosci 23:113-127 [Journal] [PubMed]

   Self-influencing synaptic plasticity (Tamosiunaite et al. 2007) [Model]

Teka W, Stockton D, Santamaria F (2016) Power-law dynamics of membrane conductances increase spiking diversity in a Hodgkin-Huxley model PLoS Comput Biol 12(3):e1004776 [Journal]

   Hodgkin–Huxley model with fractional gating (Teka et al. 2016) [Model]

Tiesinga PH (2005) Stimulus competition by inhibitory interference. Neural Comput 17:2421-53 [PubMed]

Tiesinga PH, Fellous JM, Jose JV, Sejnowski TJ (2001) Computational model of carbachol-induced delta, theta, and gamma oscillations in the hippocampus. Hippocampus 11:251-74 [PubMed]

Tiesinga PHE, Toups JV (2005) The Possible Role of Spike Patterns in Cortical Information Processing J Comp Neurosci 18:275-286 [Journal]

Tonnelier A (2005) Categorization of neural excitability using threshold models. Neural Comput 17:1447-55 [PubMed]

Tripp B, Eliasmith C (2007) Neural populations can induce reliable postsynaptic currents without observable spike rate changes or precise spike timing. Cereb Cortex 17:1830-40 [Journal] [PubMed]

   Neural transformations on spike timing information (Tripp and Eliasmith 2007) [Model]

Tripp BP, Eliasmith C (2010) Population models of temporal differentiation. Neural Comput 22:621-59 [Journal] [PubMed]

   Population models of temporal differentiation (Tripp and Eliasmith 2010) [Model]

van Elburg RA, van Ooyen A (2010) Impact of dendritic size and dendritic topology on burst firing in pyramidal cells. PLoS Comput Biol 6:e1000781 [Journal] [PubMed]

   Impact of dendritic size and topology on pyramidal cell burst firing (van Elburg and van Ooyen 2010) [Model]

Vogelstein RJ, Mallik U, Culurciello E, Cauwenberghs G, Etienne-Cummings R (2007) A multichip neuromorphic system for spike-based visual information processing. Neural Comput 19:2281-300 [PubMed]

Woo B, Shin D, Yang D, Choi J (2005) Reduced Model and Simulation of Neuron with Passive Dendritic Cable: An Eigenfunction Expansion Approach J Comp Neurosci 19:379-397 [Journal]

Zhou Y, Carney LH, Colburn HS (2005) A Model for Interaural Time Difference Sensitivity in the Medial Superior Olive: Interaction of Excitatory and Inhibitory Synaptic Inputs, Channel Dynamics, and Cellular Morphology J Neurosci 25:3046-3058 [Journal] [PubMed]

   A model for interaural time difference sensitivity in the medial superior olive (Zhou et al 2005) [Model]

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