Citation Relationships



Ascoli GA, Donohue DE, Halavi M (2007) NeuroMorpho.Org: a central resource for neuronal morphologies. J Neurosci 27:9247-51 [PubMed]

References and models cited by this paper

References and models that cite this paper

Allen JM, Elbasiouny SM (2018) The effects of model composition design choices on high-fidelity simulations of motoneuron recruitment and firing behaviors. J Neural Eng 15:036024 [Journal] [PubMed]

Ascoli GA, Gasparini S, Medinilla V, Migliore M (2010) Local control of postinhibitory rebound spiking in CA1 pyramidal neuron dendrites. J Neurosci 30:6434-42 [Journal] [PubMed]

   CA1 pyramidal neuron: rebound spiking (Ascoli et al.2010) [Model]

Ashhad S, Narayanan R (2013) Quantitative interactions between the A-type K+ current and inositol trisphosphate receptors regulate intraneuronal Ca2+ waves and synaptic plasticity. J Physiol 591:1645-69 [Journal] [PubMed]

   Calcium waves and mGluR-dependent synaptic plasticity in CA1 pyr. neurons (Ashhad & Narayanan 2013) [Model]

Baker JL, Perez-Rosello T, Migliore M, Barrionuevo G, Ascoli GA (2011) A computer model of unitary responses from associational/commissural and perforant path synapses in hippocampal CA3 pyramidal cells. J Comput Neurosci 31:137-58 [Journal] [PubMed]

   A model of unitary responses from A/C and PP synapses in CA3 pyramidal cells (Baker et al. 2010) [Model]

Balbi P, Martinoia S, Massobrio P (2015) Axon-somatic back-propagation in detailed models of spinal alpha motoneurons. Front Comput Neurosci 9:15 [Journal] [PubMed]

   Axon-somatic back-propagation in a detailed model of cat spinal motoneuron (Balbi et al, 2015) [Model]

Basak R, Narayanan R (2018) Active dendrites regulate the spatiotemporal spread of signaling microdomains. PLoS Comput Biol 14:e1006485 [Journal] [PubMed]

   Active dendrites shape signaling microdomains in hippocampal neurons (Basak & Narayanan 2018) [Model]

Beining M, Mongiat LA, Schwarzacher SW, Cuntz H, Jedlicka P (2017) T2N as a new tool for robust electrophysiological modeling demonstrated for mature and adult-born dentate granule cells eLife [Journal]

   Mature and young adult-born dentate granule cell models (T2N interface) (Beining et al. 2017) [Model]
   GC model (Beining et al 2017) [Model]

Berzhanskaya J, Chernyy N, Gluckman BJ, Schiff SJ, Ascoli GA (2013) Modulation of hippocampal rhythms by subthreshold electric fields and network topology. J Comput Neurosci 34:369-89 [Journal] [PubMed]

   Modulation of hippocampal rhythms by electric fields and network topology (Berzhanskaya et al. 2013) [Model]

Bhalla US (2017) Synaptic input sequence discrimination on behavioral timescales mediated by reaction-diffusion chemistry in dendrites. Elife [Journal] [PubMed]

   Discrimination on behavioral time-scales mediated by reaction-diffusion in dendrites (Bhalla 2017) [Model]

Cannon RC, O'Donnell C, Nolan MF (2010) Stochastic ion channel gating in dendritic neurons: morphology dependence and probabilistic synaptic activation of dendritic spikes. PLoS Comput Biol [Journal] [PubMed]

   Stochastic ion channels and neuronal morphology (Cannon et al. 2010) [Model]

Das A, Narayanan R (2015) Active dendrites mediate stratified gamma-range coincidence detection in hippocampal model neurons. J Physiol 593:3549-76 [Journal] [PubMed]

Donohue DE, Ascoli GA (2008) A comparative computer simulation of dendritic morphology. PLoS Comput Biol 4:e1000089 [Journal] [PubMed]

   A comparative computer simulation of dendritic morphology (Donohue and Ascoli 2008) [Model]

Du K, Wu YW, Lindroos R, Liu Y, Rózsa B, Katona G, Ding JB, Kotaleski JH (2017) Cell-type-specific inhibition of the dendritic plateau potential in striatal spiny projection neurons. Proc Natl Acad Sci U S A 114:E7612-E7621 [Journal] [PubMed]

   Specific inhibition of dendritic plateau potential in striatal projection neurons (Du et al 2017) [Model]

Ferrante M, Ascoli GA (2015) Distinct and synergistic feedforward inhibition of pyramidal cells by basket and bistratified interneurons. Front Cell Neurosci 9:439 [Journal] [PubMed]

   Feedforward inhibition in pyramidal cells (Ferrante & Ascoli 2015) [Model]

Ferrante M, Blackwell KT, Migliore M, Ascoli GA (2008) Computational models of neuronal biophysics and the characterization of potential neuropharmacological targets. Curr Med Chem 15:2456-71 [PubMed]

   Computational neuropharmacology of CA1 pyramidal neuron (Ferrante et al. 2008) [Model]

Gidon A, Segev I (2012) Principles governing the operation of synaptic inhibition in dendrites. Neuron 75:330-41 [Journal] [PubMed]

   Principles governing the operation of synaptic inhibition in dendrites (Gidon & Segev 2012) [Model]

Gleeson P, Crook S, Cannon RC, Hines ML, Billings GO, Farinella M, Morse TM, Davison AP, Ray S, Bhalla US, Barnes SR, Dimitrova YD, Silver RA (2010) NeuroML: a language for describing data driven models of neurons and networks with a high degree of biological detail. PLoS Comput Biol 6:e1000815 [Journal] [PubMed]

Hagen E, Fossum JC, Pettersen KH, Alonso JM, Swadlow HA, Einevoll GT (2017) Focal Local Field Potential Signature of the Single-Axon Monosynaptic Thalamocortical Connection. J Neurosci 37:5123-5143 [Journal] [PubMed]

   LFP signature of monosynaptic thalamocortical connection (Hagen et al 2017) [Model]

Hay E, Schürmann F, Markram H, Segev I (2013) Preserving axosomatic spiking features despite diverse dendritic morphology. J Neurophysiol 109:2972-81 [Journal] [PubMed]

   Preserving axosomatic spiking features despite diverse dendritic morphology (Hay et al., 2013) [Model]

Kozloski J, Wagner J (2011) An Ultrascalable Solution to Large-scale Neural Tissue Simulation. Front Neuroinform 5:15 [Journal] [PubMed]

McDougal RA, Bulanova AS, Lytton WW (2016) Reproducibility in Computational Neuroscience Models and Simulations. IEEE Trans Biomed Eng 63:2021-35 [Journal] [PubMed]

McDougal RA, Hines ML, Lytton WW (2013) Water-tight membranes from neuronal morphology files. J Neurosci Methods 220:167-78 [Journal] [PubMed]

   Constructed Tessellated Neuronal Geometries (CTNG) (McDougal et al. 2013) [Model]

McDougal RA, Shepherd GM (2015) 3D-printer visualization of neuron models. Front Neuroinform 9:18 [Journal] [PubMed]

   3D-printer visualization of NEURON models (McDougal and Shepherd, 2015) [Model]

Munro E, Kopell N (2012) Subthreshold somatic voltage in neocortical pyramidal cells can control whether spikes propagate from the axonal plexus to axon terminals: a model study. J Neurophysiol 107:2833-52 [Journal] [PubMed]

   Neocort. pyramidal cells subthreshold somatic voltage controls spike propagation (Munro Kopell 2012) [Model]

Neymotin SA, Suter BA, Dura-Bernal S, Shepherd GM, Migliore M, Lytton WW (2017) Optimizing computer models of corticospinal neurons to replicate in vitro dynamics. J Neurophysiol 117:148-162 [Journal] [PubMed]

   Computer models of corticospinal neurons replicate in vitro dynamics (Neymotin et al. 2017) [Model]

Schneider CJ, Cuntz H, Soltesz I (2014) Linking macroscopic with microscopic neuroanatomy using synthetic neuronal populations. PLoS Comput Biol 10:e1003921 [Journal] [PubMed]

   Generation of granule cell dendritic morphology (Schneider et al. 2014) [Model]

Tejada J, Arisi GM, García-Cairasco N, Roque AC (2012) Morphological alterations in newly born dentate gyrus granule cells that emerge after status epilepticus contribute to make them less excitable. PLoS One 7:e40726 [Journal] [PubMed]

   Dentate gyrus network model (Tejada et al 2014) [Model]

Tomsett RJ, Ainsworth M, Thiele A, Sanayei M, Chen X, Gieselmann MA, Whittington MA, Cunningham MO, Kaiser M (2015) Virtual Electrode Recording Tool for EXtracellular potentials (VERTEX): comparing multi-electrode recordings from simulated and biological mammalian cortical tissue. Brain Struct Funct 220:2333-53 [Journal] [PubMed]

   Large-scale model of neocortical slice in vitro exhibiting persistent gamma (Tomsett et al. 2014) [Model]

Venkadesh S, Komendantov AO, Listopad S, Scott EO, De Jong K, Krichmar JL, Ascoli GA (2018) Evolving Simple Models of Diverse Intrinsic Dynamics in Hippocampal Neuron Types. Front Neuroinform 12:8 [Journal] [PubMed]

   Evolving simple models of diverse dynamics in hippocampal neuron types (Venkadesh et al 2018) [Model]

Williams AH, O'Donnell C, Sejnowski TJ, O'Leary T (2016) Dendritic trafficking faces physiologically critical speed-precision tradeoffs. Elife [Journal] [PubMed]

Wu T, Fan J, Lee KS, Li X (2016) Cortical neuron activation induced by electromagnetic stimulation: a quantitative analysis via modelling and simulation. J Comput Neurosci 40:51-64 [Journal] [PubMed]

(31 refs)