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Jolivet R, Rauch A, Luscher HR, Gerstner W (2006) Predicting spike timing of neocortical pyramidal neurons by simple threshold models. J Comput Neurosci 21:35-49[PubMed]

References and models cited by this paper

References and models that cite this paper

Abeles M (1991) Corticonics: Neural Circuits of the Cerebral Cortex.

Aguera y Arcas B, Fairhall AL (2003) What causes a neuron to spike? Neural Comput 15:1789-807 [PubMed]

Aguera y Arcas B, Fairhall AL, Bialek W (2003) Computation in a single neuron: Hodgkin and Huxley revisited. Neural Comput 15:1715-49 [PubMed]

Arieli A, Sterkin A, Grinvald A, Aertsen A (1996) Dynamics of ongoing activity: explanation of the large variability in evoked cortical responses. Science 273:1868-71 [PubMed]

Azouz R, Gray CM (2000) Dynamic spike threshold reveals a mechanism for synaptic coincidence detection in cortical neurons in vivo. Proc Natl Acad Sci U S A 97:8110-5 [PubMed]

Bair W, Koch C (1996) Temporal precision of spike trains in extrastriate cortex of the behaving macaque monkey. Neural Comput 8:1185-202 [PubMed]

Bair W, Zohary E, Newsome WT (2001) Correlated firing in macaque visual area MT: time scales and relationship to behavior. J Neurosci 21:1676-97 [PubMed]

Benda J, Herz AV (2003) A universal model for spike-frequency adaptation. Neural Comput 15:2523-64 [PubMed]

Berry MJ, Warland DK, Meister M (1997) The structure and precision of retinal spike trains. Proc Natl Acad Sci U S A 94:5411-6 [PubMed]

Bialek W, Rieke F, de Ruyter van Steveninck RR, Warland D (1991) Reading a neural code. Science 252:1854-7 [PubMed]

Borg-Graham LJ, Monier C, Fregnac Y (1998) Visual input evokes transient and strong shunting inhibition in visual cortical neurons. Nature 393:369-73 [PubMed]

Braitenberg V, Schuz A (1991) Anatomy of the Cortex: Statistics and Geometry

Brette R, Gerstner W (2005) Adaptive exponential integrate-and-fire model as an effective description of neuronal activity. J Neurophysiol 94:3637-42 [Journal] [PubMed]

   Adaptive exponential integrate-and-fire model (Brette & Gerstner 2005) [Model]

Brillinger DR (1988) The maximum likelihood approach to the identification of neuronal firing systems. Ann Biomed Eng 16:3-16 [PubMed]

Brillinger DR, Segundo JP (1979) Empirical examination of the threshold model of neuron firing. Biol Cybern 35:213-20

Bryant HL, Segundo JP (1976) Spike initiation by transmembrane current: a white-noise analysis. J Physiol 260:279-314 [PubMed]

Bugmann G, Christodoulou C, Taylor JG (1997) Role of temporal integration and fluctuation detection in the highly irregular firing of a leaky integrator neuron model with partial reset. Neural Comp 9:985-1000

Buracas GT, Zador AM, DeWeese MR, Albright TD (1998) Efficient discrimination of temporal patterns by motion-sensitive neurons in primate visual cortex. Neuron 20:959-69 [PubMed]

Cash S, Yuste R (1998) Input summation by cultured pyramidal neurons is linear and position-independent. J Neurosci 18:10-5 [PubMed]

Cox D, Miller H (1965) The Theory of Stochastic Processes

de Ruyter van Steveninck RR, Lewen GD, Strong SP, Koberle R, Bialek W (1997) Reproducibility and variability in neural spike trains. Science 275:1805-8 [PubMed]

Destexhe A, Rudolph M, Pare D (2003) The high-conductance state of neocortical neurons in vivo. Nat Rev Neurosci 4:739-51 [PubMed]

DeWeese MR, Wehr M, Zador AM (2003) Binary spiking in auditory cortex. J Neurosci 23:7940-9 [PubMed]

Deweese MR, Zador AM (2004) Shared and private variability in the auditory cortex. J Neurophysiol 92:1840-55 [Journal] [PubMed]

Diesmann M, Gewaltig MO, Aertsen A (1999) Stable propagation of synchronous spiking in cortical neural networks. Nature 402:529-33 [Journal] [PubMed]

   Stable propagation of synchronous spiking in cortical neural networks (Diesmann et al 1999) [Model]

Erisir A, Lau D, Rudy B, Leonard CS (1999) Function of specific K(+) channels in sustained high-frequency firing of fast-spiking neocortical interneurons. J Neurophysiol 82:2476-89 [Journal] [PubMed]

Fourcaud-Trocme N, Hansel D, van Vreeswijk C, Brunel N (2003) How spike generation mechanisms determine the neuronal response to fluctuating inputs. J Neurosci 23:11628-40 [PubMed]

FUORTES MG, MANTEGAZZINI F (1962) Interpretation of the repetitive firing of nerve cells. J Gen Physiol 45:1163-79 [PubMed]

Gawne TJ, Richmond BJ (1993) How independent are the messages carried by adjacent inferior temporal cortical neurons? J Neurosci 13:2758-71 [PubMed]

Gerstner W, Kempter R, van Hemmen JL, Wagner H (1996) A neuronal learning rule for sub-millisecond temporal coding. Nature 383:76-81 [PubMed]

Gerstner W, Kistler WM (2002) Spiking neuron models

Hausser M, Roth A (1997) Estimating the time course of the excitatory synaptic conductance in neocortical pyramidal cells using a novel voltage jump method. J Neurosci 17:7606-25 [PubMed]

Heggelund P, Albus K (1978) Response variability and orientation discrimination of single cells in striate cortex of cat. Exp Brain Res 32:197-211 [PubMed]

Helmchen F, Svoboda K, Denk W, Tank DW (1999) In vivo dendritic calcium dynamics in deep-layer cortical pyramidal neurons. Nat Neurosci 2:989-96 [PubMed]

Hill AV (1936) Excitation and accomodation in nerve Proc Roy Soc 119:305-355

Ikegaya Y, Aaron G, Cossart R, Aronov D, Lampl I, Ferster D, Yuste R (2004) Synfire chains and cortical songs: temporal modules of cortical activity. Science 304:559-64 [PubMed]

Izhikevich EM (2003) Simple model of spiking neurons. IEEE Trans Neural Netw 14:1569-72 [Journal] [PubMed]

   Artificial neuron model (Izhikevich 2003, 2004, 2007) [Model]

Izhikevich EM (2004) Which model to use for cortical spiking neurons? IEEE Trans Neural Netw 15:1063-70 [Journal] [PubMed]

   Artificial neuron model (Izhikevich 2003, 2004, 2007) [Model]

Johansson RS, Birznieks I (2004) First spikes in ensembles of human tactile afferents code complex spatial fingertip events. Nat Neurosci 7:170-7 [PubMed]

Jolivet R (2005) Effective minimal threshold models of neuronal activity PhD Thesis (http: --icwww.epfl.ch-?rjolivet-publications-reports-PhDthesis.pdf)

Jolivet R, Gerstner W (2006) Predicting spike times of a detailed conductance-based neuron model driven by stochastic spike arrival. J Physiol Paris 98:442-51 [PubMed]

Jolivet R, Lewis TJ, Gerstner W (2004) Generalized integrate-and-fire models of neuronal activity approximate spike trains of a detailed model to a high degree of accuracy. J Neurophysiol 92:959-76 [Journal] [PubMed]

   Spike Response Model simulator (Jolivet et al. 2004, 2006, 2008) [Model]

Kara P, Reinagel P, Reid RC (2000) Low response variability in simultaneously recorded retinal, thalamic, and cortical neurons. Neuron 27:635-46 [PubMed]

Keat J, Reinagel P, Reid RC, Meister M (2001) Predicting every spike: a model for the responses of visual neurons. Neuron 30:803-17 [PubMed]

Kistler WM, Gerstner W, van Hemmen JL (1997) Reduction of Hodgkin-Huxley equations to a single-variable threshold model. Neural Comput 9:1015-1045

Koch C, Bernander O, Douglas RJ (1995) Do neurons have a voltage or a current threshold for action potential initiation? J Comput Neurosci 2:63-82 [Journal] [PubMed]

Koch C, Rapp M, Segev I (1996) A brief history of time (constants). Cereb Cortex 6:93-101 [PubMed]

La Camera G, Rauch A, Luscher HR, Senn W, Fusi S (2004) Minimal models of adapted neuronal response to in vivo-like input currents. Neural Comput 16:2101-24 [PubMed]

Lapicque L (1907) Recherches quantitatives sur lexcitation electrique des nerfs traitee comme une polarisation J Physiol Pathol Gen 9:620-635 [Journal]

Larkum ME, Zhu JJ, Sakmann B (2001) Dendritic mechanisms underlying the coupling of the dendritic with the axonal action potential initiation zone of adult rat layer 5 pyramidal neurons. J Physiol 533:447-66 [PubMed]

Latham PE, Richmond BJ, Nelson PG, Nirenberg S (2000) Intrinsic dynamics in neuronal networks. I. Theory. J Neurophysiol 83:808-27 [Journal] [PubMed]

Lee YW, Schetzen M (1965) Measurement of the Wiener kernels of a non-linear system by cross-correlation Int J Cont 2:237-255

Mainen ZF, Sejnowski TJ (1995) Reliability of spike timing in neocortical neurons. Science 268:1503-6 [PubMed]

McCormick DA, Connors BW, Lighthall JW, Prince DA (1985) Comparative electrophysiology of pyramidal and sparsely spiny stellate neurons of the neocortex. J Neurophysiol 54:782-806 [Journal] [PubMed]

Paninski L, Pillow J, Simoncelli E (2005) Comparing integrate-and-fire models estimated using intracellular and extracellular data Neurocomputing 65:379-385

Polsky A, Mel BW, Schiller J (2004) Computational subunits in thin dendrites of pyramidal cells. Nat Neurosci 7:621-7 [Journal] [PubMed]

   CA1 pyramidal neuron: as a 2-layer NN and subthreshold synaptic summation (Poirazi et al 2003) [Model]

Powers RK, Binder MD (1996) Experimental evaluation of input-output models of motoneuron discharge. J Neurophysiol 75:367-79 [Journal] [PubMed]

Powers RK, Sawczuk A, Musick JR, Binder MD (2004) Multiple mechanisms of spike-frequency adaptation in motoneurones. J Physiol Paris 93:101-14 [PubMed]

Rauch A, La Camera G, Luscher HR, Senn W, Fusi S (2003) Neocortical pyramidal cells respond as integrate-and-fire neurons to in vivo-like input currents. J Neurophysiol 90:1598-612 [Journal] [PubMed]

Reich DS, Victor JD, Knight BW, Ozaki T, Kaplan E (1997) Response variability and timing precision of neuronal spike trains in vivo. J Neurophysiol 77:2836-41 [Journal] [PubMed]

Reinagel P, Reid RC (2002) Precise firing events are conserved across neurons. J Neurosci 22:6837-41 [PubMed]

Rieke F, Warland D, de Ruyter van Stevenink RR, Bialek W (1996) Spikes: Exploring The Language Of The Brain

Robinson HP, Kawai N (1993) Injection of digitally synthesized synaptic conductance transients to measure the integrative properties of neurons. J Neurosci Methods 49:157-65 [PubMed]

Roth A, Hausser M (2001) Compartmental models of rat cerebellar Purkinje cells based on simultaneous somatic and dendritic patch-clamp recordings. J Physiol 535:445-72 [PubMed]

Schneidman E, Freedman B, Segev I (1998) Ion channel stochasticity may be critical in determining the reliability and precision of spike timing. Neural Comput 10:1679-703 [PubMed]

Schwindt P, O'Brien JA, Crill W (1997) Quantitative analysis of firing properties of pyramidal neurons from layer 5 of rat sensorimotor cortex. J Neurophysiol 77:2484-98 [Journal] [PubMed]

Schwindt PC, Crill WE (1982) Factors influencing motoneuron rhythmic firing: results from a voltage-clamp study. J Neurophysiol 48:875-90 [Journal] [PubMed]

Shadlen MN, Newsome WT (1998) The variable discharge of cortical neurons: implications for connectivity, computation, and information coding. J Neurosci 18:3870-96 [Journal] [PubMed]

Stein RB (1967) Some models of neuronal variability. Biophys J 7:37-68 [PubMed]

Steriade M, Timofeev I, Grenier F (2001) Natural waking and sleep states: a view from inside neocortical neurons. J Neurophysiol 85:1969-85 [Journal] [PubMed]

Stevens CF, Zador AM (1998) Novel integrate-and-fire-like model of repetitive firing in cortical neurons. Proceedings of the Fifth Joint Symposium on Neural Computation

Stuart GJ, Hausser M (2001) Dendritic coincidence detection of EPSPs and action potentials. Nat Neurosci 4:63-71 [PubMed]

Stuart GJ, Sakmann B (1994) Active propagation of somatic action potentials into neocortical pyramidal cell dendrites. Nature 367:69-72 [PubMed]

Theunissen F, Miller JP (1995) Temporal encoding in nervous systems: a rigorous definition. J Comput Neurosci 2:149-62 [Journal] [PubMed]

Troyer TW, Miller KD (1997) Physiological gain leads to high ISI variability in a simple model of a cortical regular spiking cell. Neural Comput 9:971-83 [PubMed]

Tuckwell HC (1988) Introduction to Theoretical Neurobiology. Volume 2: Nonlinear and Stochastic Theories

Wehr M, Zador AM (2003) Balanced inhibition underlies tuning and sharpens spike timing in auditory cortex. Nature 426:442-6 [PubMed]

Wiener N (1958) Nonlinear Problems in Random Theory

Jolivet R, Kobayashi R, Rauch A, Naud R, Shinomoto S, Gerstner W (2008) A benchmark test for a quantitative assessment of simple neuron models. J Neurosci Methods 169:417-24 [Journal] [PubMed]

   Spike Response Model simulator (Jolivet et al. 2004, 2006, 2008) [Model]

Kobayashi R, Tsubo Y, Shinomoto S (2009) Made-to-order spiking neuron model equipped with a multi-timescale adaptive threshold. Front Comput Neurosci 3:9 [Journal] [PubMed]

   Multi-timescale adaptive threshold model (Kobayashi et al 2009) (NEURON) [Model]
   Multi-timescale adaptive threshold model (Kobayashi et al 2009) [Model]

Koendgen H, Geisler C, Fusi S, Wang XJ, Luscher HR, Giugliano M (2008) The dynamical response properties of neocortical neurons to temporally modulated noisy inputs in vitro. Cereb Cortex 18:2086-97 [Journal] [PubMed]

   Response properties of neocort. neurons to temporally modulated noisy inputs (Koendgen et al. 2008) [Model]

Legenstein R, Maass W (2011) Branch-specific plasticity enables self-organization of nonlinear computation in single neurons. J Neurosci 31:10787-802 [Journal] [PubMed]

Mensi S, Naud R, Pozzorini C, Avermann M, Petersen CC, Gerstner W (2012) Parameter Extraction and Classification of Three Cortical Neuron Types Reveals Two Distinct Adaptation Mechanisms J Neurophysiol 107(6):1756-1775 [Journal] [PubMed]

   Extraction and classification of three cortical neuron types (Mensi et al. 2012) [Model]

Zeldenrust F, Chameau P, Wadman WJ (2018) Spike and burst coding in thalamocortical relay cells. PLoS Comput Biol 14:e1005960 [Journal] [PubMed]

   Thalamocortical Relay cell under current clamp in high-conductance state (Zeldenrust et al 2018) [Model]

Zeldenrust F, Chameau PJ, Wadman WJ (2013) Reliability of spike and burst firing in thalamocortical relay cells. J Comput Neurosci 35(3):317-344 [Journal] [PubMed]

   Reliability of Morris-Lecar neurons with added T, h, and AHP currents (Zeldenrust et al. 2013) [Model]

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