Citation Relationships



Vierling-Claassen D, Cardin JA, Moore CI, Jones SR (2010) Computational modeling of distinct neocortical oscillations driven by cell-type selective optogenetic drive: separable resonant circuits controlled by low-threshold spiking and fast-spiking interneurons. Front Hum Neurosci 4:198 [PubMed]

   Engaging distinct oscillatory neocortical circuits (Vierling-Claassen et al. 2010)

References and models cited by this paper

References and models that cite this paper

Bartos M, Vida I, Jonas P (2007) Synaptic mechanisms of synchronized gamma oscillations in inhibitory interneuron networks. Nat Rev Neurosci 8:45-56 [Journal] [PubMed]

Beierlein M, Gibson JR, Connors BW (2003) Two dynamically distinct inhibitory networks in layer 4 of the neocortex. J Neurophysiol 90:2987-3000 [Journal] [PubMed]

Börgers C, Kopell N (2005) Effects of noisy drive on rhythms in networks of excitatory and inhibitory neurons. Neural Comput 17:557-608 [Journal] [PubMed]

Bush PC, Sejnowski TJ (1993) Reduced compartmental models of neocortical pyramidal cells. J Neurosci Methods 46:159-66 [PubMed]

Cardin JA, Carlén M, Meletis K, Knoblich U, Zhang F, Deisseroth K, Tsai LH, Moore CI (2009) Driving fast-spiking cells induces gamma rhythm and controls sensory responses. Nature 459:663-7 [Journal] [PubMed]

Castro-Alamancos MA, Connors BW (1996) Cellular mechanisms of the augmenting response: short-term plasticity in a thalamocortical pathway. J Neurosci 16:7742-56 [PubMed]

Cauli B, Audinat E, Lambolez B, Angulo MC, Ropert N, Tsuzuki K, Hestrin S, Rossier J (1997) Molecular and physiological diversity of cortical nonpyramidal cells. J Neurosci 17:3894-906 [PubMed]

Contreras D, Steriade M (1995) Cellular basis of EEG slow rhythms: a study of dynamic corticothalamic relationships. J Neurosci 15:604-22 [PubMed]

Deisseroth K, Feng G, Majewska AK, Miesenböck G, Ting A, Schnitzer MJ (2006) Next-generation optical technologies for illuminating genetically targeted brain circuits. J Neurosci 26:10380-6 [Journal] [PubMed]

Destexhe A, Rudolph M, Fellous JM, Sejnowski TJ (2001) Fluctuating synaptic conductances recreate in vivo-like activity in neocortical neurons. Neuroscience 107:13-24 [PubMed]

   Fluctuating synaptic conductances recreate in-vivo-like activity (Destexhe et al 2001) [Model]
   Thalamocortical Relay cell under current clamp in high-conductance state (Zeldenrust et al 2018) [Model]

Fanselow EE, Richardson KA, Connors BW (2008) Selective, state-dependent activation of somatostatin-expressing inhibitory interneurons in mouse neocortex. J Neurophysiol 100:2640-52 [Journal] [PubMed]

Garabedian CE, Jones SR, Merzenich MM, Dale A, Moore CI (2003) Band-pass response properties of rat SI neurons. J Neurophysiol 90:1379-91 [Journal] [PubMed]

Gibson JR, Beierlein M, Connors BW (2005) Functional properties of electrical synapses between inhibitory interneurons of neocortical layer 4. J Neurophysiol 93:467-80 [Journal] [PubMed]

Gloveli T, Dugladze T, Rotstein HG, Traub RD, Monyer H, Heinemann U, Whittington MA, Kopell NJ (2005) Orthogonal arrangement of rhythm-generating microcircuits in the hippocampus. Proc Natl Acad Sci U S A 102:13295-300 [Journal] [PubMed]

   Gamma and theta rythms in biophysical models of hippocampus circuits (Kopell et al. 2011) [Model]

Goldberg JH, Yuste R (2005) Space matters: local and global dendritic Ca2+ compartmentalization in cortical interneurons. Trends Neurosci 28:158-67 [Journal] [PubMed]

Hasselmo ME, McGaughy J (2004) High acetylcholine levels set circuit dynamics for attention and encoding and low acetylcholine levels set dynamics for consolidation. Prog Brain Res 145:207-31 [Journal] [PubMed]

Herrmann CS, Demiralp T (2005) Human EEG gamma oscillations in neuropsychiatric disorders. Clin Neurophysiol 116:2719-33 [Journal] [PubMed]

Hughes SW, Crunelli V (2005) Thalamic mechanisms of EEG alpha rhythms and their pathological implications. Neuroscientist 11:357-72 [Journal] [PubMed]

Jensen O, Kaiser J, Lachaux JP (2007) Human gamma-frequency oscillations associated with attention and memory. Trends Neurosci 30:317-24 [Journal] [PubMed]

Jones EG (2001) The thalamic matrix and thalamocortical synchrony. Trends Neurosci 24:595-601 [PubMed]

Jones SR, Pinto DJ, Kaper TJ, Kopell N (2000) Alpha-frequency rhythms desynchronize over long cortical distances: a modeling study. J Comput Neurosci 9:271-91 [PubMed]

Jones SR, Pritchett DL, Sikora MA, Stufflebeam SM, Hämäläinen M, Moore CI (2009) Quantitative analysis and biophysically realistic neural modeling of the MEG mu rhythm: rhythmogenesis and modulation of sensory-evoked responses. J Neurophysiol 102:3554-72 [Journal] [PubMed]

   Biophysically realistic neural modeling of the MEG mu rhythm (Jones et al. 2009) [Model]

Jones SR, Pritchett DL, Stufflebeam SM, Hämäläinen M, Moore CI (2007) Neural correlates of tactile detection: a combined magnetoencephalography and biophysically based computational modeling study. J Neurosci 27:10751-64 [Journal] [PubMed]

   MEG of Somatosensory Neocortex (Jones et al. 2007) [Model]

Kapfer C, Glickfeld LL, Atallah BV, Scanziani M (2007) Supralinear increase of recurrent inhibition during sparse activity in the somatosensory cortex. Nat Neurosci 10:743-53 [Journal] [PubMed]

Kawaguchi Y (1995) Physiological subgroups of nonpyramidal cells with specific morphological characteristics in layer II/III of rat frontal cortex. J Neurosci 15:2638-55 [PubMed]

Larkum ME, Waters J, Sakmann B, Helmchen F (2007) Dendritic spikes in apical dendrites of neocortical layer 2/3 pyramidal neurons. J Neurosci 27:8999-9008 [Journal] [PubMed]

Ma Y, Hu H, Berrebi AS, Mathers PH, Agmon A (2006) Distinct subtypes of somatostatin-containing neocortical interneurons revealed in transgenic mice. J Neurosci 26:5069-82 [Journal] [PubMed]

Mainen ZF, Sejnowski TJ (1996) Influence of dendritic structure on firing pattern in model neocortical neurons. Nature 382:363-6 [Journal] [PubMed]

   Influence of dendritic structure on neocortical neuron firing patterns (Mainen and Sejnowski 1996) [Model]

Mann EO, Paulsen O (2007) Role of GABAergic inhibition in hippocampal network oscillations. Trends Neurosci 30:343-9 [Journal] [PubMed]

Markram H, Toledo-Rodriguez M, Wang Y, Gupta A, Silberberg G, Wu C (2004) Interneurons of the neocortical inhibitory system. Nat Rev Neurosci 5:793-807 [Journal] [PubMed]

Mason A, Larkman A (1990) Correlations between morphology and electrophysiology of pyramidal neurons in slices of rat visual cortex. II. Electrophysiology. J Neurosci 10:1415-28 [PubMed]

Mitzdorf U (1985) Current source-density method and application in cat cerebral cortex: investigation of evoked potentials and EEG phenomena. Physiol Rev 65:37-100 [Journal] [PubMed]

Mitzdorf U (1987) Properties of the evoked potential generators: current source-density analysis of visually evoked potentials in the cat cortex. Int J Neurosci 33:33-59 [PubMed]

Pinto DJ, Jones SR, Kaper TJ, Kopell N (2003) Analysis of State-Dependent Transitions in Frequency and Long-Distance Coordination in a Model Oscillatory Cortical Circuit Journal of Computational Neuroscience 15:283-298 [Journal] [PubMed]

Ren JQ, Aika Y, Heizmann CW, Kosaka T (1992) Quantitative analysis of neurons and glial cells in the rat somatosensory cortex, with special reference to GABAergic neurons and parvalbumin-containing neurons. Exp Brain Res 92:1-14 [PubMed]

Rotstein HG, Pervouchine DD, Acker CD, Gillies MJ, White JA, Buhl EH, Whittington MA, Kopell N (2005) Slow and fast inhibition and an H-current interact to create a theta rhythm in a model of CA1 interneuron network. J Neurophysiol 94:1509-18 [Journal] [PubMed]

Salin PA, Prince DA (1996) Spontaneous GABAA receptor-mediated inhibitory currents in adult rat somatosensory cortex. J Neurophysiol 75:1573-88 [Journal] [PubMed]

Silberberg G, Markram H (2007) Disynaptic inhibition between neocortical pyramidal cells mediated by Martinotti cells. Neuron 53:735-46 [Journal] [PubMed]

Silva LR, Amitai Y, Connors BW (1991) Intrinsic oscillations of neocortex generated by layer 5 pyramidal neurons. Science 251:432-5 [PubMed]

Tallon-Baudry C (2009) The roles of gamma-band oscillatory synchrony in human visual cognition. Front Biosci (Landmark Ed) 14:321-32 [PubMed]

Tan Z, Hu H, Huang ZJ, Agmon A (2008) Robust but delayed thalamocortical activation of dendritic-targeting inhibitory interneurons. Proc Natl Acad Sci U S A 105:2187-92 [Journal] [PubMed]

Tateno T, Harsch A, Robinson HP (2004) Threshold firing frequency-current relationships of neurons in rat somatosensory cortex: type 1 and type 2 dynamics. J Neurophysiol 92:2283-94 [Journal] [PubMed]

Tiesinga P, Sejnowski TJ (2009) Cortical enlightenment: are attentional gamma oscillations driven by ING or PING? Neuron 63:727-32 [Journal] [PubMed]

Tort AB, Rotstein HG, Dugladze T, Gloveli T, Kopell NJ (2007) On the formation of gamma-coherent cell assemblies by oriens lacunosum-moleculare interneurons in the hippocampus. Proc Natl Acad Sci U S A 104:13490-5 [Journal] [PubMed]

   Gamma and theta rythms in biophysical models of hippocampus circuits (Kopell et al. 2011) [Model]

Uhlenbeck GE, Ornstein LS (1930) On the theory of Brownian motion Phys Rev 36:823-841 [Journal]

Ulrich D (2002) Dendritic resonance in rat neocortical pyramidal cells. J Neurophysiol 87:2753-9 [Journal] [PubMed]

Varela JA, Sen K, Gibson J, Fost J, Abbott LF, Nelson SB (1997) A quantitative description of short-term plasticity at excitatory synapses in layer 2/3 of rat primary visual cortex. J Neurosci 17:7926-40 [Journal] [PubMed]

   Short term plasticity of synapses onto V1 layer 2/3 pyramidal neuron (Varela et al 1997) [Model]

Whittington MA, Traub RD, Jefferys JG (1995) Synchronized oscillations in interneuron networks driven by metabotropic glutamate receptor activation. Nature 373:612-5 [Journal] [PubMed]

Whittington MA, Traub RD, Kopell N, Ermentrout B, Buhl EH (2000) Inhibition-based rhythms: experimental and mathematical observations on network dynamics. Int J Psychophysiol 38:315-36 [PubMed]

Xiang Z, Huguenard JR, Prince DA (1998) Cholinergic switching within neocortical inhibitory networks. Science 281:985-8 [PubMed]

Ziegler DA, Pritchett DL, Hosseini-Varnamkhasti P, Corkin S, Hämäläinen M, Moore CI, Jones SR (2010) Transformations in oscillatory activity and evoked responses in primary somatosensory cortex in middle age: a combined computational neural modeling and MEG study. Neuroimage 52:897-912 [Journal] [PubMed]

Chadderdon GL, Mohan A, Suter BA, Neymotin SA, Kerr CC, Francis JT, Shepherd GM, Lytton WW (2014) Motor cortex microcircuit simulation based on brain activity mapping. Neural Comput 26:1239-62 [Journal] [PubMed]

   Motor cortex microcircuit simulation based on brain activity mapping (Chadderdon et al. 2014) [Model]

Gidon A, Segev I (2012) Principles governing the operation of synaptic inhibition in dendrites. Neuron 75:330-41 [Journal] [PubMed]

   Principles governing the operation of synaptic inhibition in dendrites (Gidon & Segev 2012) [Model]

Hayut I, Fanselow EE, Connors BW, Golomb D (2011) LTS and FS inhibitory interneurons, short-term synaptic plasticity, and cortical circuit dynamics. PLoS Comput Biol 7:e1002248 [Journal] [PubMed]

   Rate model of a cortical RS-FS-LTS network (Hayut et al. 2011) [Model]

Konstantoudaki X, Papoutsi A, Chalkiadaki K, Poirazi P, Sidiropoulou K (2014) Modulatory effects of inhibition on persistent activity in a cortical microcircuit model. Front Neural Circuits 8:7 [Journal] [PubMed]

   Pyramidal neuron, fast, regular, and irregular spiking interneurons (Konstantoudaki et al 2014) [Model]

Lee S, Jones SR (2013) Distinguishing mechanisms of gamma frequency oscillations in human current source signals using a computational model of a laminar neocortical network. Front Hum Neurosci 7:869 [Journal] [PubMed]

   Current Dipole in Laminar Neocortex (Lee et al. 2013) [Model]

Parasuram H, Nair B, D'Angelo E, Hines M, Naldi G, Diwakar S (2016) Computational Modeling of Single Neuron Extracellular Electric Potentials and Network Local Field Potentials using LFPsim. Front Comput Neurosci 10:65 [Journal] [PubMed]

   Modeling single neuron LFPs and extracellular potentials with LFPsim (Parasuram et al. 2016) [Model]

Tchumatchenko T, Clopath C (2014) Oscillations emerging from noise-driven steady state in networks with electrical synapses and subthreshold resonance. Nat Commun 5:5512 [Journal] [PubMed]

   Oscillations emerging from noise-driven NNs (Tchumatchenko & Clopath 2014) [Model]

(58 refs)