Citation Relationships



Camuñas-Mesa LA, Quiroga RQ (2013) A detailed and fast model of extracellular recordings. Neural Comput 25:1191-212 [PubMed]

   A detailed and fast model of extracellular recordings (Camunas-Mesa & Qurioga 2013)

References and models cited by this paper

References and models that cite this paper

Bédard C, Kröger H, Destexhe A (2004) Modeling extracellular field potentials and the frequency-filtering properties of extracellular space. Biophys J 86:1829-42 [Journal] [PubMed]

   Modeling local field potentials (Bedard et al. 2004) [Model]

Bédard C, Rodrigues S, Roy N, Contreras D, Destexhe A (2010) Evidence for frequency-dependent extracellular impedance from the transfer function between extracellular and intracellular potentials: intracellular-LFP transfer function. J Comput Neurosci 29:389-403 [Journal] [PubMed]

Blanche TJ, Spacek MA, Hetke JF, Swindale NV (2005) Polytrodes: high-density silicon electrode arrays for large-scale multiunit recording. J Neurophysiol 93:2987-3000 [Journal] [PubMed]

Buzsáki G (2004) Large-scale recording of neuronal ensembles. Nat Neurosci 7:446-51 [Journal] [PubMed]

Contreras D, Destexhe A, Steriade M (1997) Intracellular and computational characterization of the intracortical inhibitory control of synchronized thalamic inputs in vivo. J Neurophysiol 78:335-50 [Journal] [PubMed]

Destexhe A, Bedard C (2012) Do neurons generate monopolar current sources? J Neurophysiol 108:953-5 [Journal] [PubMed]

Destexhe A, Contreras D, Steriade M, Sejnowski TJ, Huguenard JR (1996) In vivo, in vitro, and computational analysis of dendritic calcium currents in thalamic reticular neurons. J Neurosci 16:169-85 [Journal] [PubMed]

   Thalamic reticular neurons: the role of Ca currents (Destexhe et al 1996) [Model]

Einevoll GT, Franke F, Hagen E, Pouzat C, Harris KD (2012) Towards reliable spike-train recordings from thousands of neurons with multielectrodes. Curr Opin Neurobiol 22:11-7 [Journal] [PubMed]

Farrant M, Feldmeyer D, Takahashi T, Cull-Candy SG (1994) NMDA-receptor channel diversity in the developing cerebellum. Nature 368:335-9 [Journal] [PubMed]

Frey U, Egert U, Heer F, Hafizovic S, Hierlemann A (2009) Microelectronic system for high-resolution mapping of extracellular electric fields applied to brain slices. Biosens Bioelectron 24:2191-8 [Journal] [PubMed]

Gabriel S, Lau RW, Gabriel C (1996) The dielectric properties of biological tissues: III. Parametric models for the dielectric spectrum of tissues. Phys Med Biol 41:2271-93 [PubMed]

Gibson S, Judy JW, Markovi D (2012) Spike sorting: The first step in decoding the brain Ieee Signal Processing Magazine 29(1):124-143

Gold C, Henze DA, Koch C (2007) Using extracellular action potential recordings to constrain compartmental models. J Comput Neurosci 23:39-58 [Journal] [PubMed]

   Extracellular Action Potential Simulations (Gold et al 2007) [Model]

Gold C, Henze DA, Koch C, Buzsáki G (2006) On the origin of the extracellular action potential waveform: A modeling study. J Neurophysiol 95:3113-28 [Journal] [PubMed]

   Extracellular Action Potential Simulations (Gold et al 2007) [Model]

Harris KD, Henze DA, Csicsvari J, Hirase H, Buzsáki G (2000) Accuracy of tetrode spike separation as determined by simultaneous intracellular and extracellular measurements. J Neurophysiol 84:401-14 [Journal] [PubMed]

Henze DA, Borhegyi Z, Csicsvari J, Mamiya A, Harris KD, Buzsáki G (2000) Intracellular features predicted by extracellular recordings in the hippocampus in vivo. J Neurophysiol 84:390-400 [Journal] [PubMed]

Hill DN, Mehta SB, Kleinfeld D (2011) Quality metrics to accompany spike sorting of extracellular signals. J Neurosci 31:8699-705 [Journal] [PubMed]

Hines ML, Carnevale NT (1997) The NEURON simulation environment. Neural Comput 9:1179-209 [PubMed]

Holt GR, Koch C (1999) Electrical interactions via the extracellular potential near cell bodies. J Comput Neurosci 6:169-84 [Journal] [PubMed]

   Extracellular Action Potential Simulations (Gold et al 2007) [Model]

Ison MJ, Mormann F, Cerf M, Koch C, Fried I, Quiroga RQ (2011) Selectivity of pyramidal cells and interneurons in the human medial temporal lobe. J Neurophysiol 106:1713-21 [Journal] [PubMed]

Kwon KY, Eldawlatly S, Oweiss K (2012) NeuroQuest: a comprehensive analysis tool for extracellular neural ensemble recordings. J Neurosci Methods 204:189-201 [Journal] [PubMed]

Lambacher A, Vitzthum V, Zeitler R, Eickenscheidt M, Eversmann B, Thewes R (2011) Identifying firing mammalian neurons in networks with high-resolution multi-transistor array (MTA) Applied Physics A-materials Science And Processing 102:1-11

Lempka SF, Johnson MD, Moffitt MA, Otto KJ, Kipke DR, McIntyre CC (2011) Theoretical analysis of intracortical microelectrode recordings. J Neural Eng 8:045006 [Journal] [PubMed]

Lewicki M (1994) Bayesian modeling and classification of neural signals Neural Comput 6:1005

Lewicki MS (1998) A review of methods for spike sorting: the detection and classification of neural action potentials. Network 9:R53-78 [PubMed]

Lindén H, Tetzlaff T, Potjans TC, Pettersen KH, Grün S, Diesmann M, Einevoll GT (2011) Modeling the spatial reach of the LFP. Neuron 72:859-72 [Journal] [PubMed]

Llinás RR (1988) The intrinsic electrophysiological properties of mammalian neurons: insights into central nervous system function. Science 242:1654-64 [PubMed]

Logothetis NK, Kayser C, Oeltermann A (2007) In vivo measurement of cortical impedance spectrum in monkeys: implications for signal propagation. Neuron 55:809-23 [Journal] [PubMed]

Mamlouk AM, Sharp H, Menne KML, Hofmann UG, Martinetz T (2005) Unsupervised spike sorting with ICA and its evaluation using GENESIS simulations Neurocomputing 65:275-282

Markram H, Toledo-Rodriguez M, Wang Y, Gupta A, Silberberg G, Wu C (2004) Interneurons of the neocortical inhibitory system. Nat Rev Neurosci 5:793-807 [Journal] [PubMed]

Martinez J, Pedreira C, Ison MJ, Quian Quiroga R (2009) Realistic simulation of extracellular recordings. J Neurosci Methods 184:285-93 [Journal] [PubMed]

Massobrio P, Massobrio G, Martinoia S (2007) Multi-program approach for simulating recorded extracellular signals generated by neurons coupled to microelectrode arrays Neurocomputing 70:2467-2476 [Journal]

McNaughton BL, O'Keefe J, Barnes CA (1983) The stereotrode: a new technique for simultaneous isolation of several single units in the central nervous system from multiple unit records. J Neurosci Methods 8:391-7 [PubMed]

Mechler F, Victor JD (2012) Dipole characterization of single neurons from their extracellular action potentials. J Comput Neurosci 32:73-100 [Journal] [PubMed]

   Dipole Localization Kit (Mechler & Victor, 2012) [Model]

Menne KML, Folkers A, Malina T, Maex R, Hofmann UG (2002) Test of spike-sorting algorithms on the basis of simulated network data Neurocomputing 44:1119-1126

Moffitt MA, McIntyre CC (2005) Model-based analysis of cortical recording with silicon microelectrodes. Clin Neurophysiol 116:2240-50 [Journal] [PubMed]

Nelson MJ, Pouget P (2010) Do electrode properties create a problem in interpreting local field potential recordings? J Neurophysiol 103:2315-7 [Journal] [PubMed]

Nelson MJ, Pouget P, Nilsen EA, Patten CD, Schall JD (2008) Review of signal distortion through metal microelectrode recording circuits and filters. J Neurosci Methods 169:141-57 [Journal] [PubMed]

O'Keefe J, Recce ML (1993) Phase relationship between hippocampal place units and the EEG theta rhythm. Hippocampus 3:317-30 [Journal] [PubMed]

Pedreira C, Martinez J, Ison MJ, Quian Quiroga R (2012) How many neurons can we see with current spike sorting algorithms? J Neurosci Methods 211:58-65 [Journal] [PubMed]

Pettersen KH, Einevoll GT (2008) Amplitude variability and extracellular low-pass filtering of neuronal spikes. Biophys J 94:784-802 [Journal] [PubMed]

Pettersen KH, Hagen E, Einevoll GT (2008) Estimation of population firing rates and current source densities from laminar electrode recordings. J Comput Neurosci 24:291-313 [Journal] [PubMed]

Plonsey R (1969) Bioelectric Phenomena

Quian_quiroga R (2007) Spike sorting Scholarpedia 2:3583

Quian_quiroga R (2012) Quick guide: Spike sorting Current Biology 22:R45-R46

Quiroga RQ (2012) Concept cells: the building blocks of declarative memory functions. Nat Rev Neurosci 13:587-97 [Journal] [PubMed]

Quiroga RQ, Nadasdy Z, Ben-Shaul Y (2004) Unsupervised spike detection and sorting with wavelets and superparamagnetic clustering. Neural Comput 16:1661-87 [Journal] [PubMed]

Quiroga RQ, Reddy L, Koch C, Fried I (2007) Decoding visual inputs from multiple neurons in the human temporal lobe. J Neurophysiol 98:1997-2007 [Journal] [PubMed]

Quiroga RQ, Reddy L, Kreiman G, Koch C, Fried I (2005) Invariant visual representation by single neurons in the human brain. Nature 435:1102-7 [Journal] [PubMed]

Riera JJ, Ogawa T, Goto T, Sumiyoshi A, Nonaka H, Evans A, Miyakawa H, Kawashima R (2012) Pitfalls in the dipolar model for the neocortical EEG sources. J Neurophysiol 108:956-75 [Journal] [PubMed]

Robinson DA (1968) The electrical properties of metal microelectrodes Proc IEEE 56:1065

Rudolph M, Pelletier JG, Paré D, Destexhe A (2005) Characterization of synaptic conductances and integrative properties during electrically induced EEG-activated states in neocortical neurons in vivo. J Neurophysiol 94:2805-21 [Journal] [PubMed]

Rutishauser U, Schuman EM, Mamelak AN (2006) Online detection and sorting of extracellularly recorded action potentials in human medial temporal lobe recordings, in vivo. J Neurosci Methods 154:204-24 [Journal] [PubMed]

Schmidt EM (1999) Electrodes for many single neuron recordings Methods for neural ensemble recordings, Nicolelis MA, ed.

Schmitzer-Torbert N, Jackson J, Henze D, Harris K, Redish AD (2005) Quantitative measures of cluster quality for use in extracellular recordings. Neuroscience 131:1-11 [Journal] [PubMed]

Segev R, Goodhouse J, Puchalla J, Berry MJ (2004) Recording spikes from a large fraction of the ganglion cells in a retinal patch. Nat Neurosci 7:1154-61 [Journal] [PubMed]

Shoham S, O'Connor DH, Segev R (2006) How silent is the brain: is there a "dark matter" problem in neuroscience? J Comp Physiol A Neuroethol Sens Neural Behav Physiol 192:777-84 [Journal] [PubMed]

Smith LS, Mtetwa N (2007) A tool for synthesizing spike trains with realistic interference. J Neurosci Methods 159:170-80 [Journal] [PubMed]

Tóth TI, Crunelli V (1995) A numerical procedure to estimate kinetic and steady-state characteristics of inactivating ionic currents. J Neurosci Methods 63:1-12 [PubMed]

   NEUROFIT: fitting HH models to voltage clamp data (Willms 2002) [Model]

Wehr M, Pezaris JS, Sahani M (1999) Simultaneous paired intracellular and tetrode recordings for evaluating the performance of spike sorting algorithms Neurocomputing 26:1061-1068

Mondragón-González SL, Burguière E (2017) Bio-inspired benchmark generator for extracellular multi-unit recordings. Sci Rep 7:43253 [Journal] [PubMed]

(61 refs)