Citation Relationships



Zeldenrust F, Chameau PJ, Wadman WJ (2013) Reliability of spike and burst firing in thalamocortical relay cells. J Comput Neurosci 35(3):317-344 [PubMed]

   Reliability of Morris-Lecar neurons with added T, h, and AHP currents (Zeldenrust et al. 2013)

References and models cited by this paper

References and models that cite this paper

Badel L, Lefort S, Brette R, Petersen CC, Gerstner W, Richardson MJ (2007) Dynamic I-V curves are reliable predictors of naturalistic pyramidal-neuron voltage traces. J Neurophysiol 99(2):656-66 [PubMed]

Bernander O, Douglas RJ, Martin KA, Koch C (1991) Synaptic background activity influences spatiotemporal integration in single pyramidal cells. Proc Natl Acad Sci U S A 88:11569-73 [PubMed]

Bryant HL, Segundo JP (1976) Spike initiation by transmembrane current: a white-noise analysis. J Physiol 260:279-314 [PubMed]

Cafaro J, Rieke F (2010) Noise correlations improve response fidelity and stimulus encoding. Nature 468:964-7 [PubMed]

Chacron MJ, Longtin A, Maler L (2004) To burst or not to burst? J Comput Neurosci 17:127-36 [Journal] [PubMed]

de Ruyter van Steveninck RR, Lewen GD, Strong SP, Koberle R, Bialek W (1997) Reproducibility and variability in neural spike trains. Science 275:1805-8 [PubMed]

Destexhe A, Babloyantz A, Sejnowski TJ (1993) Ionic mechanisms for intrinsic slow oscillations in thalamic relay neurons. Biophys J 65:1538-52 [Journal] [PubMed]

   Thalamocortical Relay cell under current clamp in high-conductance state (Zeldenrust et al 2018) [Model]

Dyhrfjeld-Johnsen J, Morgan RJ, Foldy C, Soltesz I (2008) Upregulated H-current in hyperexcitable CA1 dendrites after febrile seizures. Front Cell Neurosci 2:2 [Journal] [PubMed]

George MS, Abbott LF, Siegelbaum SA (2009) HCN hyperpolarization-activated cation channels inhibit EPSPs by interactions with M-type K(+) channels. Nat Neurosci 12:577-84 [PubMed]

Goldberg JM, Smith CE, Fernández C (1984) Relation between discharge regularity and responses to externally applied galvanic currents in vestibular nerve afferents of the squirrel monkey. J Neurophysiol 51:1236-56 [PubMed]

Golding NL, Kath WL, Spruston N (2001) Dichotomy of action-potential backpropagation in CA1 pyramidal neuron dendrites. J Neurophysiol 86:2998-3010 [Journal] [PubMed]

   Dichotomy of action-potential backpropagation in CA1 pyramidal neuron dendrites (Golding et al 2001) [Model]

Gutkin B, Ermentrout GB, Rudolph M (2003) Spike Generating Dynamics and the Conditions for Spike-Time Precision in Cortical Neurons Journal of Computational Neuroscience 15:91-103 [Journal] [PubMed]

Gutkin BS, Ermentrout GB (1998) Dynamics of membrane excitability determine interspike interval variability: a link between spike generation mechanisms and cortical spike train statistics. Neural Comput 10:1047-65 [PubMed]

Hodgkin AL (1948) The local electric changes associated with repetitive action in a non-medullated axon. J Physiol 107:165-81 [PubMed]

Huguenard JR, McCormick DA (1992) Simulation of the currents involved in rhythmic oscillations in thalamic relay neurons. J Neurophysiol 68:1373-83 [Journal] [PubMed]

Hunter JD, Milton JG (2003) Amplitude and frequency dependence of spike timing: implications for dynamic regulation. J Neurophysiol 90:387-94 [Journal] [PubMed]

Hunter JD, Milton JG, Thomas PJ, Cowan JD (1998) Resonance effect for neural spike time reliability. J Neurophysiol 80:1427-38 [Journal] [PubMed]

Izhikevich EM (2007) Dynamical Systems in Neuroscience: The Geometry of Excitability and Bursting [Journal]

   Artificial neuron model (Izhikevich 2003, 2004, 2007) [Model]

Jahnsen H, Llinas R (1984) Ionic basis for the electro-responsiveness and oscillatory properties of guinea-pig thalamic neurones in vitro. J Physiol 349:227-47 [PubMed]

Johansson RS, Birznieks I (2004) First spikes in ensembles of human tactile afferents code complex spatial fingertip events. Nat Neurosci 7:170-7 [PubMed]

Jolivet R, Rauch A, Luscher HR, Gerstner W (2006) Predicting spike timing of neocortical pyramidal neurons by simple threshold models. J Comput Neurosci 21:35-49 [Journal] [PubMed]

   Spike Response Model simulator (Jolivet et al. 2004, 2006, 2008) [Model]

Kepecs A, Lisman J (2003) Information encoding and computation with spikes and bursts. Network 14:103-18 [PubMed]

Kistler WM, Gerstner W, van Hemmen JL (1997) Reduction of Hodgkin-Huxley equations to a single-variable threshold model. Neural Comput 9:1015-1045

Kreuz T, Chicharro D, Greschner M, Andrzejak RG (2011) Time-resolved and time-scale adaptive measures of spike train synchrony. J Neurosci Methods 195:92-106 [PubMed]

Kreuz T, Haas JS, Morelli A, Abarbanel HD, Politi A (2007) Measuring spike train synchrony. J Neurosci Methods 165:151-61 [PubMed]

Kruskal PB, Stanis JJ, McNaughton BL, Thomas PJ (2007) A binless correlation measure reduces the variability of memory reactivation estimates. Stat Med 26:3997-4008 [PubMed]

Kuznetsova MS, Higgs MH, Spain WJ (2008) Adaptation of firing rate and spike-timing precision in the avian cochlear nucleus. J Neurosci 28:11906-15 [PubMed]

Lesica NA, Stanley GB (2004) Encoding of natural scene movies by tonic and burst spikes in the lateral geniculate nucleus. J Neurosci 24:10731-40 [PubMed]

Lyttle D, Fellous JM (2011) A new similarity measure for spike trains: sensitivity to bursts and periods of inhibition. J Neurosci Methods 199:296-309

Maccaferri G, Mangoni M, Lazzari A, DiFrancesco D (1993) Properties of the hyperpolarization-activated current in rat hippocampal CA1 pyramidal cells. J Neurophysiol 69:2129-36 [Journal] [PubMed]

Magee JC (1998) Dendritic hyperpolarization-activated currents modify the integrative properties of hippocampal CA1 pyramidal neurons. J Neurosci 18:7613-24 [PubMed]

Mainen ZF, Sejnowski TJ (1995) Reliability of spike timing in neocortical neurons. Science 268:1503-6 [PubMed]

Mainen ZF, Sejnowski TJ (1996) Influence of dendritic structure on firing pattern in model neocortical neurons. Nature 382:363-6 [Journal] [PubMed]

   Influence of dendritic structure on neocortical neuron firing patterns (Mainen and Sejnowski 1996) [Model]

McCormick DA, Huguenard JR (1992) A model of the electrophysiological properties of thalamocortical relay neurons. J Neurophysiol 68:1384-400 [Journal] [PubMed]

Migliore M, Messineo L, Ferrante M (2004) Dendritic Ih selectively blocks temporal summation of unsynchronized distal inputs in CA1 pyramidal neurons. J Comput Neurosci 16:5-13 [Journal] [PubMed]

   CA1 pyramidal neuron: effects of Ih on distal inputs (Migliore et al 2004) [Model]

Morris C, Lecar H (1981) Voltage oscillations in the barnacle giant muscle fiber. Biophys J 35:193-213 [Journal] [PubMed]

   Morris-Lecar model of the barnacle giant muscle fiber (Morris, Lecar 1981) [Model]

Naud R, Gerhard F, Mensi S, Gerstner W (2011) Improved similarity measures for small sets of spike trains. Neural Comput 23:3016-69 [Journal] [PubMed]

Oswald AM, Chacron MJ, Doiron B, Bastian J, Maler L (2004) Parallel processing of sensory input by bursts and isolated spikes. J Neurosci 24:4351-62 [PubMed]

Paiva AR, Park I, Principe JC (2010) A comparison of binless spike train measures Neural Computing Applications 19(3):405-419

Poirazi P, Brannon T, Mel BW (2003a) Arithmetic of subthreshold synaptic summation in a model CA1 pyramidal cell. Neuron 37:977-987 [Journal] [PubMed]

   CA1 pyramidal neuron: as a 2-layer NN and subthreshold synaptic summation (Poirazi et al 2003) [Model]

Poolos NP, Migliore M, Johnston D (2002) Pharmacological upregulation of h-channels reduces the excitability of pyramidal neuron dendrites. Nat Neurosci 5:767-74 [PubMed]

   CA1 pyramidal neuron: effects of Lamotrigine on dendritic excitability (Poolos et al 2002) [Model]

Prescott SA, De Koninck Y, Sejnowski TJ (2008) Biophysical basis for three distinct dynamical mechanisms of action potential initiation. PLoS Comput Biol 4:e1000198 [Journal] [PubMed]

   Dynamics of Spike Initiation (Prescott et al. 2008) [Model]

Prescott SA, Ratte S, De Koninck Y, Sejnowski TJ (2006) Nonlinear interaction between shunting and adaptation controls a switch between integration and coincidence detection in pyramidal neurons. J Neurosci 26:9084-97 [PubMed]

Prescott SA, Ratte S, De Koninck Y, Sejnowski TJ (2008) Pyramidal neurons switch from integrators in vitro to resonators under in vivo-like conditions. J Neurophysiol [Journal] [PubMed]

   Pyramidal neurons switch from integrators to resonators (Prescott et al. 2008) [Model]

Reinagel P, Godwin D, Sherman SM, Koch C (1999) Encoding of visual information by LGN bursts. J Neurophysiol 81:2558-69 [Journal] [PubMed]

Reinagel P, Reid RC (2000) Temporal coding of visual information in the thalamus. J Neurosci 20:5392-400 [PubMed]

Rinzel J, Ermentrout B (1998) Analysis of neural excitability and oscillations. Methods In Neuronal Modeling 2nd Edition, Segev I, Koch C, ed. pp.251

Rubin JE, Terman D (2004) High frequency stimulation of the subthalamic nucleus eliminates pathological thalamic rhythmicity in a computational model. J Comput Neurosci 16:211-35 [Journal] [PubMed]

   High frequency stimulation of the Subthalamic Nucleus (Rubin and Terman 2004) [Model]
   Optimal deep brain stimulation of the subthalamic nucleus-a computational study (Feng et al. 2007) [Model]

Rudolph M, Destexhe A (2003) Tuning neocortical pyramidal neurons between integrators and coincidence detectors. J Comput Neurosci 14:239-51 [Journal] [PubMed]

Schneider AD, Cullen KE, Chacron MJ (2011) In vivo conditions induce faithful encoding of stimuli by reducing nonlinear synchronization in vestibular sensory neurons. PLoS Comput Biol 7:e1002120-309

Schreiber S, Fellous JM, Tiesinga P, Sejnowski TJ (2004) Influence of ionic conductances on spike timing reliability of cortical neurons for suprathreshold rhythmic inputs. J Neurophysiol 91:194-205 [Journal] [PubMed]

Schreiber S, Fellous JM, Whitmer D, Tiesinga P, Sejnowski TJ (2003) A new correlation-based measure of spike timing reliability. Neurocomputing 52-54:925-931 [PubMed]

Schreiber S, Samengo I, Herz AV (2009) Two distinct mechanisms shape the reliability of neural responses. J Neurophysiol 101:2239-51 [PubMed]

Sherman SM (2001) Tonic and burst firing: dual modes of thalamocortical relay. Trends Neurosci 24:122-6 [PubMed]

Stein RB (1967) Some models of neuronal variability. Biophys J 7:37-68 [PubMed]

Stein RB, Gossen ER, Jones KE (2005) Neuronal variability: noise or part of the signal? Nat Rev Neurosci 6:389-97 [PubMed]

Steriade M, Llinas RR (1988) The functional states of the thalamus and the associated neuronal interplay. Physiol Rev 68:649-742 [PubMed]

Thomas PJ, Tiesinga PH, Fellous JM, Sejnowski TJ (2003) Reliability and bifurcation in neurons driven by multiple sinusoids. Neurocomputing 52-54:955-961

Tiesinga P, Fellous JM, Sejnowski TJ (2008) Regulation of spike timing in visual cortical circuits. Nat Rev Neurosci 9:97-107 [PubMed]

Tort AB, Rotstein HG, Dugladze T, Gloveli T, Kopell NJ (2007) On the formation of gamma-coherent cell assemblies by oriens lacunosum-moleculare interneurons in the hippocampus. Proc Natl Acad Sci U S A 104:13490-5 [Journal] [PubMed]

   Gamma and theta rythms in biophysical models of hippocampus circuits (Kopell et al. 2011) [Model]

Toups JV, Fellous JM, Thomas PJ, Sejnowski TJ, Tiesinga PH (2012) Multiple spike time patterns occur at bifurcation points of membrane potential dynamics. PLoS Comput Biol 8:e1002615-51

van Rossum MC (2001) A novel spike distance. Neural Comput 13:751-63 [PubMed]

van Welie I, van Hooft JA, Wadman WJ (2004) Homeostatic scaling of neuronal excitability by synaptic modulation of somatic hyperpolarization-activated Ih channels. Proc Natl Acad Sci U S A 101:5123-8 [PubMed]

Victor J, Purpura K (1997) Metric-space analysis of spike trains: Theory, algorithms and application Comput Neural Syst 8:127-164

Victor JD, Purpura KP (1996) Nature and precision of temporal coding in visual cortex: a metric-space analysis. J Neurophysiol 76:1310-26 [Journal] [PubMed]

Wan FYM, Tuckwell HC (1982) Neuronal firing and input variability Journal Of Theoretical Neurobiology 1:197-218

Zeldenrust F (2012) Neural coding with spikes and bursts: characterizing neurons and networks with noisy input Ph.D. thesis, University of Amsterdam.

Fietkiewicz C, Shafer GO, Platt EA, Wilson CG (2016) Variability in respiratory rhythm generation: In vitro and in silico models Communications in Nonlinear Science and Numerical Simulation 32:158-168 [Journal]

   pre-Bötzinger complex variability (Fietkiewicz et al. 2016) [Model]

Zeldenrust F, Chameau P, Wadman WJ (2018) Spike and burst coding in thalamocortical relay cells. PLoS Comput Biol 14:e1005960 [Journal] [PubMed]

   Thalamocortical Relay cell under current clamp in high-conductance state (Zeldenrust et al 2018) [Model]

(69 refs)