Citation Relationships



Riera J, Hatanaka R, Uchida T, Ozaki T, Kawashima R (2011) Quantifying the uncertainty of spontaneous Ca2+ oscillations in astrocytes: particulars of Alzheimer's disease. Biophys J 101:554-64 [PubMed]

   Spontaneous calcium oscillations in single astrocytes (Riera et al. 2011) (Manninen et al 2017)

References and models cited by this paper

References and models that cite this paper

Agulhon C, Petravicz J, McMullen AB, Sweger EJ, Minton SK, Taves SR, Casper KB, Fiacco TA, McCarthy KD (2008) What is the role of astrocyte calcium in neurophysiology? Neuron 59:932-46 [Journal] [PubMed]

Biscay R,Jimenez JC,Riera J,Valdes PA (1996) Local linearization method for numerical solution of stochastic differential equations Ann. Inst. Stat. Math. 48:631-644 [Journal]

Bushong EA, Martone ME, Jones YZ, Ellisman MH (2002) Protoplasmic astrocytes in CA1 stratum radiatum occupy separate anatomical domains. J Neurosci 22:183-92 [PubMed]

Casley CS, Lakics V, Lee HG, Broad LM, Day TA, Cluett T, Smith MA, O'Neill MJ, Kingston AE (2009) Up-regulation of astrocyte metabotropic glutamate receptor 5 by amyloid-ß peptide. Brain Res 1260:65-75 [Journal] [PubMed]

Chow SK, Yu D, Macdonald CL, Buibas M, Silva GA (2010) Amyloid ß-peptide directly induces spontaneous calcium transients, delayed intercellular calcium waves and gliosis in rat cortical astrocytes. ASN Neuro 2:e00026 [Journal] [PubMed]

Cornell-Bell AH, Finkbeiner SM, Cooper MS, Smith SJ (1990) Glutamate induces calcium waves in cultured astrocytes: long-range glial signaling. Science 247:470-3 [PubMed]

Di Garbo A, Barbi M, Chillemi S, Alloisio S, Nobile M (2007) Calcium signalling in astrocytes and modulation of neural activity. Biosystems 89:74-83 [Journal] [PubMed]

Diambra L, Guisoni N (2005) Modeling stochastic Ca2+ release from a cluster of IP3-sensitive receptors. Cell Calcium 37:321-32 [Journal] [PubMed]

Falcke M (2003) On the role of stochastic channel behavior in intracellular Ca2+ dynamics. Biophys J 84:42-56 [Journal] [PubMed]

Fellin T, Pascual O, Haydon PG (2006) Astrocytes coordinate synaptic networks: balanced excitation and inhibition. Physiology (Bethesda) 21:208-15 [Journal] [PubMed]

Garcia-Alloza M, Robbins EM, Zhang-Nunes SX, Purcell SM, Betensky RA, Raju S, Prada C, Greenberg SM, Bacskai BJ, Frosch MP (2006) Characterization of amyloid deposition in the APPswe/PS1dE9 mouse model of Alzheimer disease. Neurobiol Dis 24:516-24 [Journal] [PubMed]

Hirase H, Qian L, Barthó P, Buzsáki G (2004) Calcium dynamics of cortical astrocytic networks in vivo. PLoS Biol 2:E96 [Journal] [PubMed]

Hsiao K, Chapman P, Nilsen S, Eckman C, Harigaya Y, Younkin S, Yang F, Cole G (1996) Correlative memory deficits, Abeta elevation, and amyloid plaques in transgenic mice. Science 274:99-102 [PubMed]

Ikegaya Y, Matsuura S, Ueno S, Baba A, Yamada MK, Nishiyama N, Matsuki N (2002) Beta-amyloid enhances glial glutamate uptake activity and attenuates synaptic efficacy. J Biol Chem 277:32180-6 [Journal] [PubMed]

Jung P,Swaminathan D,Ullah A (2010) Calcium spikes: Chance or necessity? Chemical Physics 375:625-629 [Journal]

Kuchibhotla KV, Lattarulo CR, Hyman BT, Bacskai BJ (2009) Synchronous hyperactivity and intercellular calcium waves in astrocytes in Alzheimer mice. Science 323:1211-5 [Journal] [PubMed]

Li N, Sul JY, Haydon PG (2003) A calcium-induced calcium influx factor, nitric oxide, modulates the refilling of calcium stores in astrocytes. J Neurosci 23:10302-10 [PubMed]

Li YX, Rinzel J (1994) Equations for InsP3 receptor-mediated [Ca2+]i oscillations derived from a detailed kinetic model: a Hodgkin-Huxley like formalism. J Theor Biol 166:461-73 [Journal] [PubMed]

Mak DO, Foskett JK (1997) Single-channel kinetics, inactivation, and spatial distribution of inositol trisphosphate (IP3) receptors in Xenopus oocyte nucleus. J Gen Physiol 109:571-87 [PubMed]

Nett WJ, Oloff SH, McCarthy KD (2002) Hippocampal astrocytes in situ exhibit calcium oscillations that occur independent of neuronal activity. J Neurophysiol 87:528-37 [Journal] [PubMed]

Pellerin L, Magistretti PJ (2004) Neuroenergetics: calling upon astrocytes to satisfy hungry neurons. Neuroscientist 10:53-62 [Journal] [PubMed]

Riera J, Hatanaka R, Ozaki T, Kawashima R (2011) Modeling the spontaneous Ca2+ oscillations in astrocytes: Inconsistencies and usefulness. J Integr Neurosci 10:439-73 [Journal] [PubMed]

   Spontaneous calcium oscillations in single astrocytes (Riera et al. 2011) (Manninen et al 2017) [Model]

Riera J, Ogawa T, Hatanaka R, Goto T, Sumiyoshi A, Kadji HE, Nakauchi S, Kawashima R (2010) Concurrent observations of astrocytic Ca(2+) activity and multisite extracellular potentials from an intact cerebral cortex. J Biophotonics 3:147-60 [Journal] [PubMed]

Riera JJ, Jimenez JC, Wan X, Kawashima R, Ozaki T (2007) Nonlinear local electrovascular coupling. II: From data to neuronal masses. Hum Brain Mapp 28:335-54 [Journal] [PubMed]

Riera JJ, Sumiyoshi A (2010) Brain oscillations: ideal scenery to understand the neurovascular coupling. Curr Opin Neurol 23:374-81 [Journal] [PubMed]

Rojas H, Colina C, Ramos M, Benaim G, Jaffe EH, Caputo C, DiPolo R (2007) Na+ entry via glutamate transporter activates the reverse Na+/Ca2+ exchange and triggers Ca(i)2+-induced Ca2+ release in rat cerebellar Type-1 astrocytes. J Neurochem 100:1188-202 [Journal] [PubMed]

Schipke CG, Heidemann A, Skupin A, Peters O, Falcke M, Kettenmann H (2008) Temperature and nitric oxide control spontaneous calcium transients in astrocytes. Cell Calcium 43:285-95 [Journal] [PubMed]

Shigetomi E, Kracun S, Sofroniew MV, Khakh BS (2010) A genetically targeted optical sensor to monitor calcium signals in astrocyte processes. Nat Neurosci 13:759-66 [Journal] [PubMed]

Shuai JW, Huang YD, Rüdiger S (2010) Puff-wave transition in an inhomogeneous model for calcium signals. Phys Rev E Stat Nonlin Soft Matter Phys 81:041904 [Journal] [PubMed]

Shuai JW, Jung P (2002) Stochastic properties of Ca(2+) release of inositol 1,4,5-trisphosphate receptor clusters. Biophys J 83:87-97 [Journal] [PubMed]

Shuai JW, Jung P (2003) Optimal ion channel clustering for intracellular calcium signaling. Proc Natl Acad Sci U S A 100:506-10 [Journal] [PubMed]

Singaravelu K, Lohr C, Deitmer JW (2006) Regulation of store-operated calcium entry by calcium-independent phospholipase A2 in rat cerebellar astrocytes. J Neurosci 26:9579-92 [Journal] [PubMed]

Skupin A, Kettenmann H, Falcke M (2010) Calcium signals driven by single channel noise. PLoS Comput Biol [Journal] [PubMed]

Skupin A, Kettenmann H, Winkler U, Wartenberg M, Sauer H, Tovey SC, Taylor CW, Falcke M (2008) How does intracellular Ca2+ oscillate: by chance or by the clock? Biophys J 94:2404-11 [Journal] [PubMed]

Smith IF, Parker I (2009) Imaging the quantal substructure of single IP3R channel activity during Ca2+ puffs in intact mammalian cells. Proc Natl Acad Sci U S A 106:6404-9 [Journal] [PubMed]

Smith IF, Wiltgen SM, Parker I (2009) Localization of puff sites adjacent to the plasma membrane: functional and spatial characterization of Ca2+ signaling in SH-SY5Y cells utilizing membrane-permeant caged IP3. Cell Calcium 45:65-76 [Journal] [PubMed]

Stamatakis M, Mantzaris NV (2006) Modeling of ATP-mediated signal transduction and wave propagation in astrocytic cellular networks. J Theor Biol 241:649-68 [Journal] [PubMed]

Swillens S, Dupont G, Combettes L, Champeil P (1999) From calcium blips to calcium puffs: theoretical analysis of the requirements for interchannel communication. Proc Natl Acad Sci U S A 96:13750-5 [PubMed]

Takano T, Han X, Deane R, Zlokovic B, Nedergaard M (2007) Two-photon imaging of astrocytic Ca2+ signaling and the microvasculature in experimental mice models of Alzheimer's disease. Ann N Y Acad Sci 1097:40-50 [Journal] [PubMed]

Thurley K, Falcke M (2011) Derivation of Ca2+ signals from puff properties reveals that pathway function is robust against cell variability but sensitive for control. Proc Natl Acad Sci U S A 108:427-32 [Journal] [PubMed]

Ullah G, Jung P (2006) Modeling the statistics of elementary calcium release events. Biophys J 90:3485-95 [Journal] [PubMed]

Ullah G, Jung P, Cornell-Bell AH (2006) Anti-phase calcium oscillations in astrocytes via inositol (1, 4, 5)-trisphosphate regeneration. Cell Calcium 39:197-208 [Journal] [PubMed]

Wang TF, Zhou C, Tang AH, Wang SQ, Chai Z (2006) Cellular mechanism for spontaneous calcium oscillations in astrocytes. Acta Pharmacol Sin 27:861-8 [Journal] [PubMed]

Wang X, Lou N, Xu Q, Tian GF, Peng WG, Han X, Kang J, Takano T, Nedergaard M (2006) Astrocytic Ca2+ signaling evoked by sensory stimulation in vivo. Nat Neurosci 9:816-23 [Journal] [PubMed]

Wu EX, Tang H, Asai T, Yan SD (2004) Regional cerebral blood volume reduction in transgenic mutant APP (V717F, K670N/M671L) mice. Neurosci Lett 365:223-7 [Journal] [PubMed]

Zeng S, Li B, Zeng S, Chen S (2009) Simulation of spontaneous Ca2+ oscillations in astrocytes mediated by voltage-gated calcium channels. Biophys J 97:2429-37 [Journal] [PubMed]

Zhu D, Lai Y, Shelat PB, Hu C, Sun GY, Lee JC (2006) Phospholipases A2 mediate amyloid-beta peptide-induced mitochondrial dysfunction. J Neurosci 26:11111-9 [Journal] [PubMed]

Zur Nieden R, Deitmer JW (2006) The role of metabotropic glutamate receptors for the generation of calcium oscillations in rat hippocampal astrocytes in situ. Cereb Cortex 16:676-87 [Journal] [PubMed]

Manninen T, Havela R, Linne ML (2017) Reproducibility and comparability of computational models for astrocyte calcium excitability Front. Neuroinform. [Journal]

   Ca2+ oscillations in single astrocytes (Lavrentovich and Hemkin 2008) (python) (Manninen et al 2017) [Model]
   Glutamate-evoked Ca2+ oscillations in single astrocytes (Modified from Dupont et al. 2011) [Model]
   Glutamate-evoked Ca2+ oscillations in single astrocytes (De Pitta et al. 2009) (Manninen et al 2017) [Model]
   Reproducibility and comparability of models for astrocyte Ca2+ excitability (Manninen et al 2017) [Model]
   Spontaneous calcium oscillations in single astrocytes (Riera et al. 2011) (Manninen et al 2017) [Model]

Riera J, Hatanaka R, Ozaki T, Kawashima R (2011) Modeling the spontaneous Ca2+ oscillations in astrocytes: Inconsistencies and usefulness. J Integr Neurosci 10:439-73 [Journal] [PubMed]

   Spontaneous calcium oscillations in single astrocytes (Riera et al. 2011) (Manninen et al 2017) [Model]

(50 refs)