Citation Relationships



Mukunda CL, Narayanan R (2017) Degeneracy in the regulation of short-term plasticity and synaptic filtering by presynaptic mechanisms. J Physiol 595:2611-2637 [PubMed]

   Conductance based model for short term plasticity at CA3-CA1 synapses (Mukunda & Narayanan 2017)

References and models cited by this paper

References and models that cite this paper

Abbott LF, Regehr WG (2004) Synaptic computation. Nature 431:796-803 [Journal] [PubMed]

Abbott LF, Varela JA, Sen K, Nelson SB (1997) Synaptic depression and cortical gain control. Science 275:220-4 [PubMed]

Abraham WC (2008) Metaplasticity: tuning synapses and networks for plasticity. Nat Rev Neurosci 9:387 [PubMed]

Adelman JP, Maylie J, Sah P (2012) Small-conductance Ca2+-activated K+ channels: form and function. Annu Rev Physiol 74:245-69 [PubMed]

Aguera y Arcas B, Fairhall AL (2003) What causes a neuron to spike? Neural Comput 15:1789-807 [PubMed]

Ahmed MS, Siegelbaum SA (2009) Recruitment of N-Type Ca(2+) channels during LTP enhances low release efficacy of hippocampal CA1 perforant path synapses. Neuron 63:372-85 [Journal] [PubMed]

Allbritton NL, Meyer T, Stryer L (1992) Range of messenger action of calcium ion and inositol 1,4,5-trisphosphate. Science 258:1812-5 [PubMed]

Andrasfalvy BK, Magee JC (2001) Distance-dependent increase in AMPA receptor number in the dendrites of adult hippocampal CA1 pyramidal neurons. J Neurosci 21:9151-9 [PubMed]

Anirudhan A, Narayanan R (2015) Analogous synaptic plasticity profiles emerge from disparate channel combinations. J Neurosci 35:4691-705 [PubMed]

Araque A, Carmignoto G, Haydon PG, Oliet SH, Robitaille R, Volterra A (2014) Gliotransmitters travel in time and space. Neuron 81:728-39 [Journal] [PubMed]

Ashhad S, Narayanan R (2013) Quantitative interactions between the A-type K+ current and inositol trisphosphate receptors regulate intraneuronal Ca2+ waves and synaptic plasticity. J Physiol 591:1645-69 [Journal] [PubMed]

   Calcium waves and mGluR-dependent synaptic plasticity in CA1 pyr. neurons (Ashhad & Narayanan 2013) [Model]

Atwood BK, Lovinger DM, Mathur BN (2014) Presynaptic long-term depression mediated by Gi/o-coupled receptors. Trends Neurosci 37:663-73 [Journal] [PubMed]

Awatramani GB, Price GD, Trussell LO (2005) Modulation of transmitter release by presynaptic resting potential and background calcium levels. Neuron 48:109-21 [PubMed]

Barak O, Tsodyks M (2014) Working models of working memory. Curr Opin Neurobiol 25:20-4 [Journal] [PubMed]

Bardo S, Cavazzini MG, Emptage N (2006) The role of the endoplasmic reticulum Ca2+ store in the plasticity of central neurons. Trends Pharmacol Sci 27:78-84 [Journal] [PubMed]

Bartol TM, Bromer C, Kinney J, Chirillo MA, Bourne JN, Harris KM, Sejnowski TJ (2015) Nanoconnectomic upper bound on the variability of synaptic plasticity. Elife 4:e10778 [Journal] [PubMed]

Bender RA, Kirschstein T, Kretz O, Brewster AL, Richichi C, Rüschenschmidt C, Shigemoto R, Beck H, Frotscher M, Baram TZ (2007) Localization of HCN1 channels to presynaptic compartments: novel plasticity that may contribute to hippocampal maturation. J Neurosci 27:4697-706 [Journal] [PubMed]

Berger T, Borgdorff A, Crochet S, Neubauer FB, Lefort S, Fauvet B, Ferezou I, Carleton A, Lüscher HR, Petersen CC (2007) Combined voltage and calcium epifluorescence imaging in vitro and in vivo reveals subthreshold and suprathreshold dynamics of mouse barrel cortex. J Neurophysiol 97:3751-62 [Journal] [PubMed]

Bialek W, Rieke F, de Ruyter van Steveninck RR, Warland D (1991) Reading a neural code. Science 252:1854-7 [PubMed]

Bouchard R, Pattarini R, Geiger JD (2003) Presence and functional significance of presynaptic ryanodine receptors. Prog Neurobiol 69:391-418 [PubMed]

Boyes J, Bolam JP, Shigemoto R, Stanford IM (2007) Functional presynaptic HCN channels in the rat globus pallidus. Eur J Neurosci 25:2081-92 [Journal] [PubMed]

Brain KL, Trout SJ, Jackson VM, Dass N, Cunnane TC (2001) Nicotine induces calcium spikes in single nerve terminal varicosities: a role for intracellular calcium stores. Neuroscience 106:395-403 [PubMed]

Budde T, Meuth S, Pape HC (2002) Calcium-dependent inactivation of neuronal calcium channels. Nat Rev Neurosci 3:873-83 [PubMed]

Buonomano DV (2000) Decoding temporal information: A model based on short-term synaptic plasticity. J Neurosci 20:1129-41 [PubMed]

Cabezas C, Buño W (2006) Distinct transmitter release properties determine differences in short-term plasticity at functional and silent synapses. J Neurophysiol 95:3024-34 [Journal] [PubMed]

Carlson BA (2009) Temporal-pattern recognition by single neurons in a sensory pathway devoted to social communication behavior. J Neurosci 29:9417-28 [Journal] [PubMed]

Carnevale NT, Hines ML (2006) The NEURON Book [Journal]

Carvalho TP, Buonomano DV (2011) A novel learning rule for long-term plasticity of short-term synaptic plasticity enhances temporal processing. Front Integr Neurosci 5:20 [Journal] [PubMed]

Chen X, Yuan LL, Zhao C, Birnbaum SG, Frick A, Jung WE, Schwarz TL, Sweatt JD, Johnston D (2006) Deletion of Kv4.2 gene eliminates dendritic A-type K+ current and enhances induction of long-term potentiation in hippocampal CA1 pyramidal neurons. J Neurosci 26:12143-51 [PubMed]

Chung HJ, Ge WP, Qian X, Wiser O, Jan YN, Jan LY (2009) G protein-activated inwardly rectifying potassium channels mediate depotentiation of long-term potentiation. Proc Natl Acad Sci U S A 106:635-40 [PubMed]

Chung S, Li X, Nelson SB (2002) Short-term depression at thalamocortical synapses contributes to rapid adaptation of cortical sensory responses in vivo. Neuron 34:437-46 [PubMed]

Cook DL, Schwindt PC, Grande LA, Spain WJ (2003) Synaptic depression in the localization of sound. Nature 421:66-70 [PubMed]

Cooper EC, Milroy A, Jan YN, Jan LY, Lowenstein DH (1998) Presynaptic localization of Kv1.4-containing A-type potassium channels near excitatory synapses in the hippocampus. J Neurosci 18:965-74 [PubMed]

Cooper LN, Bear MF (2012) The BCM theory of synapse modification at 30: interaction of theory with experiment. Nat Rev Neurosci 13:798-810 [Journal] [PubMed]

Cuttle MF, Rusznak Z, Wong AY, Owens S, Forsythe ID (2001) Modulation of a presynaptic hyperpolarization-activated cationic current (I(h)) at an excitatory synaptic terminal in the rat auditory brainstem. J Physiol 534:733-44 [PubMed]

Das A, Narayanan R (2014) Active dendrites regulate spectral selectivity in location-dependent spike initiation dynamics of hippocampal model neurons. J Neurosci 34:1195-211 [PubMed]

Das A, Narayanan R (2015) Active dendrites mediate stratified gamma-range coincidence detection in hippocampal model neurons. J Physiol [PubMed]

De Pittà M, Volman V, Berry H, Ben-Jacob E (2011) A tale of two stories: astrocyte regulation of synaptic depression and facilitation. PLoS Comput Biol 7:e1002293 [Journal] [PubMed]

Destexhe A, Mainen ZF, Sejnowski TJ (1998) Kinetic models of synaptic transmission Methods In Neuronal Modeling, Koch C:Segev I, ed. pp.1

   Kinetic synaptic models applicable to building networks (Destexhe et al 1998) [Model]

Dhupia N, Rathour RK, Narayanan R (2014) Dendritic atrophy constricts functional maps in resonance and impedance properties of hippocampal model neurons. Front Cell Neurosci 8:456 [Journal] [PubMed]

Dingledine R, Borges K, Bowie D, Traynelis SF (1999) The glutamate receptor ion channels. Pharmacol Rev 51:7-61 [PubMed]

Dittman JS, Kreitzer AC, Regehr WG (2000) Interplay between facilitation, depression, and residual calcium at three presynaptic terminals. J Neurosci 20:1374-85 [PubMed]

Dobrunz LE, Huang EP, Stevens CF (1997) Very short-term plasticity in hippocampal synapses. Proc Natl Acad Sci U S A 94:14843-7 [PubMed]

Dodson PD, Forsythe ID (2004) Presynaptic K+ channels: electrifying regulators of synaptic terminal excitability. Trends Neurosci 27:210-7 [PubMed]

Drion G, O'Leary T, Marder E (2015) Ion channel degeneracy enables robust and tunable neuronal firing rates. Proc Natl Acad Sci U S A 112:E5361-70 [Journal] [PubMed]

Dyhrfjeld-Johnsen J, Morgan RJ, Soltesz I (2009) Double Trouble? Potential for Hyperexcitability Following Both Channelopathic up- and Downregulation of I(h) in Epilepsy. Front Neurosci 3:25-33 [PubMed]

Edelman GM, Gally JA (2001) Degeneracy and complexity in biological systems. Proc Natl Acad Sci U S A 98:13763-8 [PubMed]

Emptage NJ, Reid CA, Fine A (2001) Calcium stores in hippocampal synaptic boutons mediate short-term plasticity, store-operated Ca2+ entry, and spontaneous transmitter release. Neuron 29:197-208 [PubMed]

Famulare M, Fairhall A (2010) Feature selection in simple neurons: how coding depends on spiking dynamics. Neural Comput 22:581-98 [PubMed]

Fink CC, Slepchenko B, Moraru II, Watras J, Schaff JC, Loew LM (2000) An image-based model of calcium waves in differentiated neuroblastoma cells. Biophys J 79:163-83 [Journal] [PubMed]

   Calcium waves in neuroblastoma cells (Fink et al. 2000) [Model]

Fioravante D, Regehr WG (2011) Short-term forms of presynaptic plasticity. Curr Opin Neurobiol 21:269-74 [Journal] [PubMed]

Fortune ES, Rose GJ (2001) Short-term synaptic plasticity as a temporal filter. Trends Neurosci 24:381-5 [PubMed]

Foster WR, Ungar LH, Schwaber JS (1993) Significance of conductances in Hodgkin-Huxley models. J Neurophysiol 70:2502-18 [Journal] [PubMed]

Fuhrmann G, Segev I, Markram H, Tsodyks M (2002) Coding of temporal information by activity-dependent synapses. J Neurophysiol 87:140-8 [Journal] [PubMed]

Geiger JR, Jonas P (2000) Dynamic control of presynaptic Ca(2+) inflow by fast-inactivating K(+) channels in hippocampal mossy fiber boutons. Neuron 28:927-39 [PubMed]

Gingrich KJ, Byrne JH (1985) Simulation of synaptic depression, posttetanic potentiation, and presynaptic facilitation of synaptic potentials from sensory neurons mediating gill-withdrawal reflex in Aplysia. J Neurophysiol 53:652-69 [Journal] [PubMed]

   SN-MN neurons of Aplysia (Zhou et al. 2014) [Model]

Gjorgjieva J, Drion G, Marder E (2016) Computational implications of biophysical diversity and multiple timescales in neurons and synapses for circuit performance. Curr Opin Neurobiol 37:44-52 [Journal] [PubMed]

Goldman DE (1943) POTENTIAL, IMPEDANCE, AND RECTIFICATION IN MEMBRANES. J Gen Physiol 27:37-60 [PubMed]

Goldman MS, Golowasch J, Marder E, Abbott LF (2001) Global structure, robustness, and modulation of neuronal models. J Neurosci 21:5229-38 [Journal] [PubMed]

   Global structure, robustness, and modulation of neuronal models (Goldman et al. 2001) [Model]

Halassa MM, Haydon PG (2010) Integrated brain circuits: astrocytic networks modulate neuronal activity and behavior. Annu Rev Physiol 72:335-55 [Journal] [PubMed]

Han MH, Kawasaki A, Wei JY, Barnstable CJ (2001) Miniature postsynaptic currents depend on Ca2+ released from internal stores via PLC/IP3 pathway. Neuroreport 12:2203-7 [PubMed]

Hanus C, Schuman EM (2013) Proteostasis in complex dendrites. Nat Rev Neurosci 14:638-48 [PubMed]

Hengen KB, Torrado Pacheco A, McGregor JN, Van Hooser SD, Turrigiano GG (2016) Neuronal Firing Rate Homeostasis Is Inhibited by Sleep and Promoted by Wake. Cell 165:180-191 [Journal] [PubMed]

Hodgkin AL, Huxley AF (1952) A quantitative description of membrane current and its application to conduction and excitation in nerve. J Physiol 117:500-44 [Journal] [PubMed]

   Squid axon (Hodgkin, Huxley 1952) (LabAXON) [Model]
   Squid axon (Hodgkin, Huxley 1952) (NEURON) [Model]
   Squid axon (Hodgkin, Huxley 1952) (SNNAP) [Model]
   Squid axon (Hodgkin, Huxley 1952) used in (Chen et al 2010) (R language) [Model]
   Squid axon (Hodgkin, Huxley 1952) (SBML, XPP, other) [Model]

Hodgkin AL, Katz B (1949) The effect of sodium ions on the electrical activity of the giant axon of the squid. J Physiol 108(1):37-77 [PubMed]

Holderith N, Lorincz A, Katona G, Rózsa B, Kulik A, Watanabe M, Nusser Z (2012) Release probability of hippocampal glutamatergic terminals scales with the size of the active zone. Nat Neurosci 15:988-97 [PubMed]

Honnuraiah S, Narayanan R (2013) A calcium-dependent plasticity rule for HCN channels maintains activity homeostasis and stable synaptic learning. PLoS One 8:e55590 [Journal] [PubMed]

Hu H, Vervaeke K, Graham LJ, Storm JF (2009) Complementary theta resonance filtering by two spatially segregated mechanisms in CA1 hippocampal pyramidal neurons. J Neurosci 29:14472-83 [PubMed]

Huang Z, Lujan R, Kadurin I, Uebele VN, Renger JJ, Dolphin AC, Shah MM (2011) Presynaptic HCN1 channels regulate Cav3.2 activity and neurotransmission at select cortical synapses. Nat Neurosci 14:478-86 [Journal] [PubMed]

Hulme SR, Jones OD, Abraham WC (2013) Emerging roles of metaplasticity in behaviour and disease. Trends Neurosci 36:353-62 [Journal] [PubMed]

Jackman SL, Turecek J, Belinsky JE, Regehr WG (2016) The calcium sensor synaptotagmin 7 is required for synaptic facilitation. Nature 529:88-91 [Journal] [PubMed]

Johnston D, Magee JC, Colbert CM, Cristie BR (1996) Active properties of neuronal dendrites. Annu Rev Neurosci 19:165-86 [PubMed]

Johnston D, Narayanan R (2008) Active dendrites: colorful wings of the mysterious butterflies. Trends Neurosci 31:309-16 [PubMed]

Kirizs T, Kerti-Szigeti K, Lorincz A, Nusser Z (2014) Distinct axo-somato-dendritic distributions of three potassium channels in CA1 hippocampal pyramidal cells. Eur J Neurosci 39:1771-83 [Journal] [PubMed]

Kispersky TJ, Caplan JS, Marder E (2012) Increase in sodium conductance decreases firing rate and gain in model neurons. J Neurosci 32:10995-1004 [Journal] [PubMed]

Klingauf J, Neher E (1997) Modeling buffered Ca2+ diffusion near the membrane: implications for secretion in neuroendocrine cells. Biophys J 72:674-90 [PubMed]

Li YX, Rinzel J (1994) Equations for InsP3 receptor-mediated [Ca2+]i oscillations derived from a detailed kinetic model: a Hodgkin-Huxley like formalism. J Theor Biol 166:461-73 [PubMed]

Lin MT, Lujan R, Watanabe M, Adelman JP, Maylie J (2008) SK2 channel plasticity contributes to LTP at Schaffer collateral-CA1 synapses. Nat Neurosci 11:170-7 [PubMed]

Llano I, González J, Caputo C, Lai FA, Blayney LM, Tan YP, Marty A (2000) Presynaptic calcium stores underlie large-amplitude miniature IPSCs and spontaneous calcium transients. Nat Neurosci 3:1256-65 [Journal] [PubMed]

Lujan R, Albasanz JL, Shigemoto R, Juiz JM (2005) Preferential localization of the hyperpolarization-activated cyclic nucleotide-gated cation channel subunit HCN1 in basket cell terminals of the rat cerebellum. Eur J Neurosci 21:2073-82 [PubMed]

Luján R, Maylie J, Adelman JP (2009) New sites of action for GIRK and SK channels. Nat Rev Neurosci 10:475-80 [Journal] [PubMed]

Magee JC (1998) Dendritic hyperpolarization-activated currents modify the integrative properties of hippocampal CA1 pyramidal neurons. J Neurosci 18:7613-24 [PubMed]

Magee JC (2000) Dendritic integration of excitatory synaptic input. Nat Rev Neurosci 1:181-90 [PubMed]

Magee JC, Cook EP (2000) Somatic EPSP amplitude is independent of synapse location in hippocampal pyramidal neurons. Nat Neurosci 3:895-903 [PubMed]

   CA1 pyramidal neuron: Synaptic Scaling (Magee, Cook 2000) [Model]

Mahfooz K, Singh M, Renden R, Wesseling JF (2016) A Well-Defined Readily Releasable Pool with Fixed Capacity for Storing Vesicles at Calyx of Held. PLoS Comput Biol 12:e1004855 [Journal] [PubMed]

Marder E (2011) Variability, compensation, and modulation in neurons and circuits. Proc Natl Acad Sci U S A 108 Suppl 3:15542-8 [PubMed]

Marder E, Goaillard JM (2006) Variability, compensation and homeostasis in neuron and network function. Nat Rev Neurosci 7:563-74 [PubMed]

Marder E, Goeritz ML, Otopalik AG (2015) Robust circuit rhythms in small circuits arise from variable circuit components and mechanisms. Curr Opin Neurobiol 31:156-63 [Journal] [PubMed]

Marder E, Taylor AL (2011) Multiple models to capture the variability in biological neurons and networks. Nat Neurosci 14:133-8 [PubMed]

Markram H, Gupta A, Uziel A, Wang Y, Tsodyks M (2000) Information processing with frequency-dependent synaptic connections. Neurobiol Learn Mem 70:101-12 [PubMed]

Meir A, Ginsburg S, Butkevich A, Kachalsky SG, Kaiserman I, Ahdut R, Demirgoren S, Rahamimoff R (1999) Ion channels in presynaptic nerve terminals and control of transmitter release. Physiol Rev 79:1019-88 [Journal] [PubMed]

Migliore M, Cook EP, Jaffe DB, Turner DA, Johnston D (1995) Computer simulations of morphologically reconstructed CA3 hippocampal neurons. J Neurophysiol 73:1157-68 [Journal] [PubMed]

   CA3 Pyramidal Neuron (Migliore et al 1995) [Model]

Migliore M, Migliore R (2012) Know your current I: interaction with a shunting current explains the puzzling effects of its pharmacological or pathological modulations PLoS One 7(5):e36867 [Journal] [PubMed]

   CA1 pyramidal neuron: Ih current (Migliore et al. 2012) [Model]

Miki T, Malagon G, Pulido C, Llano I, Neher E, Marty A (2016) Actin- and Myosin-Dependent Vesicle Loading of Presynaptic Docking Sites Prior to Exocytosis. Neuron 91:808-823 [Journal] [PubMed]

Mishra P, Narayanan R (2015) High-conductance states and A-type K+ channels are potential regulators of the conductance-current balance triggered by HCN channels. J Neurophysiol 113:23-43 [PubMed]

Mochida S, Few AP, Scheuer T, Catterall WA (2008) Regulation of presynaptic Ca(V)2.1 channels by Ca2+ sensor proteins mediates short-term synaptic plasticity. Neuron 57:210-6 [Journal] [PubMed]

Nadkarni S, Bartol TM, Sejnowski TJ, Levine H (2010) Modelling vesicular release at hippocampal synapses. PLoS Comput Biol 6:e1000983 [Journal] [PubMed]

Nadkarni S, Bartol TM, Stevens CF, Sejnowski TJ, Levine H (2012) Short-term plasticity constrains spatial organization of a hippocampal presynaptic terminal. Proc Natl Acad Sci U S A 109:14657-62 [Journal] [PubMed]

Nadkarni S, Jung P (2007) Modeling synaptic transmission of the tripartite synapse. Phys Biol 4:1-9 [Journal] [PubMed]

Nadkarni S, Jung P, Levine H (2008) Astrocytes optimize the synaptic transmission of information. PLoS Comput Biol 4:e1000088 [PubMed]

Narayanan R, Johnston D (2007) Long-term potentiation in rat hippocampal neurons is accompanied by spatially widespread changes in intrinsic oscillatory dynamics and excitability. Neuron 56:1061-75 [Journal] [PubMed]

   Resonance properties through Chirp stimulus responses (Narayanan Johnston 2007, 2008) [Model]
   Chirp stimulus responses in a morphologically realistic model (Narayanan and Johnston, 2007) [Model]

Narayanan R, Johnston D (2008) The h channel mediates location dependence and plasticity of intrinsic phase response in rat hippocampal neurons. J Neurosci 28:5846-60 [Journal] [PubMed]

   Resonance properties through Chirp stimulus responses (Narayanan Johnston 2007, 2008) [Model]

Narayanan R, Johnston D (2010) The h current is a candidate mechanism for regulating the sliding modification threshold in a BCM-like synaptic learning rule. J Neurophysiol 104:1020-33 [Journal] [PubMed]

   BCM-like synaptic plasticity with conductance-based models (Narayanan Johnston, 2010) [Model]

Narayanan R, Johnston D (2012) Functional maps within a single neuron. J Neurophysiol 108:2343-51 [PubMed]

Nelson SB, Turrigiano GG (2008) Strength through diversity. Neuron 60:477-82 [PubMed]

Nolan MF, Malleret G, Dudman JT, Buhl DL, Santoro B, Gibbs E, Vronskaya S, Buzsaki G, Siegelb (2004) A behavioral role for dendritic integration: HCN1 channels constrain spatial memory and plasticity at inputs to distal dendrites of CA1 pyramidal neurons. Cell 119:719-32 [PubMed]

Novak P, Gorelik J, Vivekananda U, Shevchuk AI, Ermolyuk YS, Bailey RJ, Bushby AJ, Moss GW, Rusakov DA, Klenerman D, Kullmann DM, Volynski KE, Korchev YE (2013) Nanoscale-targeted patch-clamp recordings of functional presynaptic ion channels. Neuron 79:1067-77 [Journal] [PubMed]

O'Leary T, Williams AH, Caplan JS, Marder E (2013) Correlations in ion channel expression emerge from homeostatic tuning rules. Proc Natl Acad Sci U S A 110:E2645-54 [PubMed]

O'Leary T, Williams AH, Franci A, Marder E (2014) Cell types, network homeostasis, and pathological compensation from a biologically plausible ion channel expression model. Neuron 82:809-21 [Journal] [PubMed]

Pan B, Zucker RS (2009) A general model of synaptic transmission and short-term plasticity. Neuron 62:539-54 [Journal] [PubMed]

Pannasch U, Rouach N (2013) Emerging role for astroglial networks in information processing: from synapse to behavior. Trends Neurosci 36:405-17 [Journal] [PubMed]

Pavlov I, Scimemi A, Savtchenko L, Kullmann DM, Walker MC (2011) I(h)-mediated depolarization enhances the temporal precision of neuronal integration. Nat Commun 2:199 [Journal] [PubMed]

Pfister JP, Dayan P, Lengyel M (2010) Synapses with short-term plasticity are optimal estimators of presynaptic membrane potentials. Nat Neurosci 13:1271-5 [Journal] [PubMed]

Poirazi P, Brannon T, Mel BW (2003b) Pyramidal Neuron as Two-Layer Neural Network. Neuron 37:989-999 [Journal] [PubMed]

   CA1 pyramidal neuron: as a 2-layer NN and subthreshold synaptic summation (Poirazi et al 2003) [Model]

Popovic MA, Carnevale N, Rozsa B, Zecevic D (2015) Electrical behaviour of dendritic spines as revealed by voltage imaging. Nat Commun 6:8436 [Journal] [PubMed]

Prinz AA, Billimoria CP, Marder E (2003) Alternative to hand-tuning conductance-based models: construction and analysis of databases of model neurons. J Neurophysiol 90:3998-4015 [Journal] [PubMed]

Prinz AA, Bucher D, Marder E (2004) Similar network activity from disparate circuit parameters. Nat Neurosci 7:1345-52 [PubMed]

   Lobster STG pyloric network model with calcium sensor (Gunay & Prinz 2010) (Prinz et al. 2004) [Model]

Qian J, Saggau P (1999) Activity-dependent modulation of K+ currents at presynaptic terminals of mammalian central synapses. J Physiol 519 Pt 2:427-37 [PubMed]

Rancz EA, Ishikawa T, Duguid I, Chadderton P, Mahon S, Hausser M (2007) High-fidelity transmission of sensory information by single cerebellar mossy fibre boutons. Nature 450:1245-8 [PubMed]

Rathour RK, Malik R, Narayanan R (2016) Transient potassium channels augment degeneracy in hippocampal active dendritic spectral tuning. Sci Rep 6:24678 [Journal] [PubMed]

Rathour RK, Narayanan R (2012) Influence fields: a quantitative framework for representation and analysis of active dendrites. J Neurophysiol 107:2313-34 [PubMed]

Rathour RK, Narayanan R (2012) Inactivating ion channels augment robustness of subthreshold intrinsic response dynamics to parametric variability in hippocampal model neurons. J Physiol 590:5629-52 [PubMed]

Rathour RK, Narayanan R (2014) Homeostasis of functional maps in active dendrites emerges in the absence of individual channelostasis. Proc Natl Acad Sci U S A 111:E1787-96 [Journal] [PubMed]

Ratte S, Hong S, De Schutter E, Prescott SA (2013) Impact of neuronal properties on network coding: roles of spike initiation dynamics and robust synchrony transfer. Neuron 78:758-72 [PubMed]

Regehr WG (2012) Short-term presynaptic plasticity. Cold Spring Harb Perspect Biol 4:a005702 [Journal] [PubMed]

Regehr WG, Carey MR, Best AR (2009) Activity-dependent regulation of synapses by retrograde messengers. Neuron 63:154-70 [Journal] [PubMed]

Roberts WM, Jacobs RA, Hudspeth AJ (1990) Colocalization of ion channels involved in frequency selectivity and synaptic transmission at presynaptic active zones of hair cells. J Neurosci 10:3664-84 [PubMed]

Sabatini BL, Regehr WG (1998) Optical measurement of presynaptic calcium currents. Biophys J 74:1549-63 [Journal] [PubMed]

Schoepp DD (2001) Unveiling the functions of presynaptic metabotropic glutamate receptors in the central nervous system. J Pharmacol Exp Ther 299:12-20 [PubMed]

Schwartz EJ, Blackmer T, Gerachshenko T, Alford S (2007) Presynaptic G-protein-coupled receptors regulate synaptic cleft glutamate via transient vesicle fusion. J Neurosci 27:5857-68 [Journal] [PubMed]

Sehgal M, Song C, Ehlers VL, Moyer JR (2013) Learning to learn - intrinsic plasticity as a metaplasticity mechanism for memory formation. Neurobiol Learn Mem 105:186-99 [Journal] [PubMed]

Sheng M, Liao YJ, Jan YN, Jan LY (1993) Presynaptic A-current based on heteromultimeric K+ channels detected in vivo. Nature 365:72-5 [PubMed]

Sippy T, Cruz-Martín A, Jeromin A, Schweizer FE (2003) Acute changes in short-term plasticity at synapses with elevated levels of neuronal calcium sensor-1. Nat Neurosci 6:1031-8 [PubMed]

Sjostrom PJ, Rancz EA, Roth A, Hausser M (2008) Dendritic excitability and synaptic plasticity. Physiol Rev 88:769-840 [PubMed]

Sneyd J, Keizer J, Sanderson MJ (1995) Mechanisms of calcium oscillations and waves: a quantitative analysis. FASEB J 9:1463-72 [PubMed]

Southan AP, Morris NP, Stephens GJ, Robertson B (2000) Hyperpolarization-activated currents in presynaptic terminals of mouse cerebellar basket cells. J Physiol 526 Pt 1:91-7 [PubMed]

Spruston N (2008) Pyramidal neurons: dendritic structure and synaptic integration. Nat Rev Neurosci 9:206-21 [PubMed]

Srikanth S, Narayanan R (2015) Variability in State-Dependent Plasticity of Intrinsic Properties during Cell-Autonomous Self-Regulation of Calcium Homeostasis in Hippocampal Model Neurons eNeuro [Journal] [PubMed]

Stelling J, Sauer U, Szallasi Z, Doyle FJ, Doyle J (2004) Robustness of cellular functions. Cell 118:675-85 [Journal] [PubMed]

Stuart GJ, Spruston N (2015) Dendritic integration: 60 years of progress. Nat Neurosci 18:1713-21 [Journal] [PubMed]

Südhof TC (2012) Calcium control of neurotransmitter release. Cold Spring Harb Perspect Biol 4:a011353 [Journal] [PubMed]

Südhof TC (2013) Neurotransmitter release: the last millisecond in the life of a synaptic vesicle. Neuron 80:675-90 [Journal] [PubMed]

Südhof TC (2014) The molecular machinery of neurotransmitter release (Nobel lecture). Angew Chem Int Ed Engl 53:12696-717 [Journal] [PubMed]

Taylor AL, Goaillard JM, Marder E (2009) How multiple conductances determine electrophysiological properties in a multicompartment model. J Neurosci 29:5573-86 [PubMed]

Tononi G, Sporns O, Edelman GM (1999) Measures of degeneracy and redundancy in biological networks. Proc Natl Acad Sci U S A 96:3257-62 [PubMed]

Tsay D, Dudman JT, Siegelbaum SA (2007) HCN1 channels constrain synaptically evoked Ca2+ spikes in distal dendrites of CA1 pyramidal neurons. Neuron 56:1076-89 [PubMed]

Tsodyks MV, Markram H (1997) The neural code between neocortical pyramidal neurons depends on neurotransmitter release probability. Proc Natl Acad Sci U S A 94:719-23 [PubMed]

Turrigiano G (2011) Too many cooks? Intrinsic and synaptic homeostatic mechanisms in cortical circuit refinement. Annu Rev Neurosci 34:89-103 [PubMed]

Vaidya S,Johnston D (2012) HCN channels contribute to the spatial synchrony of theta frequency synaptic inputs in CA1 pyramidal neurons. In: Neuroscience Meeting Planner. Society for Neuroscience New Orleans

Veh RW, Lichtinghagen R, Sewing S, Wunder F, Grumbach IM, Pongs O (1995) Immunohistochemical localization of five members of the Kv1 channel subunits: contrasting subcellular locations and neuron-specific co-localizations in rat brain. Eur J Neurosci 7:2189-205 [PubMed]

Verkhratsky A (2002) The endoplasmic reticulum and neuronal calcium signalling. Cell Calcium 32:393-404 [PubMed]

Watanabe S, Hoffman DA, Migliore M, Johnston D (2002) Dendritic K+ channels contribute to spike-timing dependent long-term potentiation in hippocampal pyramidal neurons. Proc Natl Acad Sci U S A 99:8366-8371 [Journal] [PubMed]

   CA1 pyramidal neuron: conditional boosting of dendritic APs (Watanabe et al 2002) [Model]

Whitacre J, Bender A (2010) Degeneracy: a design principle for achieving robustness and evolvability. J Theor Biol 263:143-53 [Journal] [PubMed]

Zucker RS (1989) Short-term synaptic plasticity. Annu Rev Neurosci 12:13-31 [PubMed]

Zucker RS (1999) Calcium- and activity-dependent synaptic plasticity. Curr Opin Neurobiol 9:305-13 [PubMed]

Zucker RS, Regehr WG (2002) Short-term synaptic plasticity. Annu Rev Physiol 64:355-405 [PubMed]

Basak R, Narayanan R (2018) Active dendrites regulate the spatiotemporal spread of signaling microdomains. PLoS Comput Biol 14:e1006485 [Journal] [PubMed]

   Active dendrites shape signaling microdomains in hippocampal neurons (Basak & Narayanan 2018) [Model]

(157 refs)