Citation Relationships



Shouval HZ, Bear MF, Cooper LN (2002) A unified model of NMDA receptor-dependent bidirectional synaptic plasticity. Proc Natl Acad Sci U S A 99:10831-6 [PubMed]

References and models cited by this paper

References and models that cite this paper

Appleby PA, Elliott T (2005) Synaptic and temporal ensemble interpretation of spike-timing-dependent plasticity. Neural Comput 17:2316-36 [Journal] [PubMed]

Appleby PA, Elliott T (2006) Stable competitive dynamics emerge from multispike interactions in a stochastic model of spike-timing-dependent plasticity. Neural Comput 18:2414-64 [Journal] [PubMed]

Appleby PA, Elliott T (2007) Multispike interactions in a stochastic model of spike-timing-dependent plasticity. Neural Comput 19:1362-99 [Journal] [PubMed]

Ashhad S, Narayanan R (2013) Quantitative interactions between the A-type K+ current and inositol trisphosphate receptors regulate intraneuronal Ca2+ waves and synaptic plasticity. J Physiol 591:1645-69 [Journal] [PubMed]

   Calcium waves and mGluR-dependent synaptic plasticity in CA1 pyr. neurons (Ashhad & Narayanan 2013) [Model]

Badoual M, Zou Q, Davison AP, Rudolph M, Bal T, Frégnac Y, Destexhe A (2006) Biophysical and phenomenological models of multiple spike interactions in spike-timing dependent plasticity. Int J Neural Syst 16:79-97 [Journal] [PubMed]

   Biophysical and phenomenological models of spike-timing dependent plasticity (Badoual et al. 2006) [Model]

Bell M, Bartol T, Sejnowski T, Rangamani P (2019) Dendritic spine geometry and spine apparatus organization govern the spatiotemporal dynamics of calcium. J Gen Physiol [Journal] [PubMed]

   Dendritic spine geometry, spine apparatus organization: spatiotemporal Ca dynamics (Bell et al 2019) [Model]

Benuskova L, Abraham WC (2007) STDP rule endowed with the BCM sliding threshold accounts for hippocampal heterosynaptic plasticity. J Comput Neurosci 22:129-33 [Journal] [PubMed]

Bono J, Clopath C (2017) Modeling somatic and dendritic spike mediated plasticity at the single neuron and network level. Nat Commun 8:706 [Journal] [PubMed]

   Modeling dendritic spikes and plasticity (Bono and Clopath 2017) [Model]

Brader JM, Senn W, Fusi S (2007) Learning real-world stimuli in a neural network with spike-driven synaptic dynamics. Neural Comput 19:2881-912 [Journal] [PubMed]

Cai Y, Gavornik JP, Cooper LN, Yeung LC, Shouval HZ (2007) Effect of stochastic synaptic and dendritic dynamics on synaptic plasticity in visual cortex and hippocampus. J Neurophysiol 97:375-86 [Journal] [PubMed]

Clopath C, Büsing L, Vasilaki E, Gerstner W (2010) Connectivity reflects coding: a model of voltage-based STDP with homeostasis. Nat Neurosci 13:344-52 [Journal] [PubMed]

   Voltage-based STDP synapse (Clopath et al. 2010) [Model]

Cui Y, Prokin I, Xu H, Delord B, Genet S, Venance L, Berry H (2016) Endocannabinoid dynamics gate spike-timing dependent depression and potentiation. Elife 5:e13185 [Journal] [PubMed]

   Endocannabinoid dynamics gate spike-timing dependent depression and potentiation (Cui et al 2016) [Model]

Doron M, Chindemi G, Muller E, Markram H, Segev I (2017) Timed Synaptic Inhibition Shapes NMDA Spikes, Influencing Local Dendritic Processing and Global I/O Properties of Cortical Neurons. Cell Rep 21:1550-1561 [Journal] [PubMed]

   Shaping NMDA spikes by timed synaptic inhibition on L5PC (Doron et al. 2017) [Model]

Gerkin RC, Lau PM, Nauen DW, Wang YT, Bi GQ (2007) Modular competition driven by NMDA receptor subtypes in spike-timing-dependent plasticity. J Neurophysiol 97:2851-62 [Journal] [PubMed]

   STDP and NMDAR Subunits (Gerkin et al. 2007) [Model]

Gerstner W, Kistler WM (2002) Mathematical formulations of Hebbian learning. Biol Cybern 87:404-15 [Journal] [PubMed]

Graupner M, Brunel N (2007) STDP in a bistable synapse model based on CaMKII and associated signaling pathways. PLoS Comput Biol 3:e221 [Journal] [PubMed]

   CaMKII system exhibiting bistability with respect to calcium (Graupner and Brunel 2007) [Model]

Graupner M, Brunel N (2012) Calcium-based plasticity model explains sensitivity of synaptic changes to spike pattern, rate, and dendritic location. Proc Natl Acad Sci U S A 109:3991-6 [Journal] [PubMed]

Hiratani N, Fukai T (2017) Detailed Dendritic Excitatory/Inhibitory Balance through Heterosynaptic Spike-Timing-Dependent Plasticity. J Neurosci 37:12106-12122 [Journal] [PubMed]

   Heterosynaptic Spike-Timing-Dependent Plasticity (Hiratani & Fukai 2017) [Model]

Hummos A, Franklin CC, Nair SS (2014) Intrinsic mechanisms stabilize encoding and retrieval circuits differentially in a hippocampal network model. Hippocampus 24:1430-48 [Journal] [PubMed]

   Role for short term plasticity and OLM cells in containing spread of excitation (Hummos et al 2014) [Model]

Jedrzejewska-Szmek J, Damodaran S, Dorman DB, Blackwell KT (2017) Calcium dynamics predict direction of synaptic plasticity in striatal spiny projection neurons. Eur J Neurosci 45:1044-1056 [Journal] [PubMed]

   Striatal Spiny Projection Neuron (SPN) plasticity rule (Jedrzejewska-Szmek et al 2016) [Model]

Kastellakis G, Silva AJ, Poirazi P (2016) Linking Memories across Time via Neuronal and Dendritic Overlaps in Model Neurons with Active Dendrites. Cell Rep 17:1491-1504 [Journal] [PubMed]

   Model of memory linking through memory allocation (Kastellakis et al. 2016) [Model]

Kim M, Huang T, Abel T, Blackwell KT (2010) Temporal sensitivity of protein kinase a activation in late-phase long term potentiation. PLoS Comput Biol 6:e1000691 [Journal] [PubMed]

   Hippocampus CA1: Temporal sensitivity of signaling pathways underlying LTP (Kim et al. 2010) [Model]

Letzkus JJ, Kampa BM, Stuart GJ (2006) Learning rules for spike timing-dependent plasticity depend on dendritic synapse location. J Neurosci 26:10420-9 [Journal] [PubMed]

   STDP depends on dendritic synapse location (Letzkus et al. 2006) [Model]

Manninen T, Hituri K, Kotaleski JH, Blackwell KT, Linne ML (2010) Postsynaptic signal transduction models for long-term potentiation and depression. Front Comput Neurosci 4:152 [Journal] [PubMed]

Masuda N, Kori H (2007) Formation of feedforward networks and frequency synchrony by spike-timing-dependent plasticity. J Comput Neurosci 22:327-45 [Journal] [PubMed]

O'Donnell C, Nolan MF, van Rossum MC (2011) Dendritic spine dynamics regulate the long-term stability of synaptic plasticity. J Neurosci 31:16142-56 [Journal] [PubMed]

   CA1 pyramidal neuron dendritic spine with plasticity (O`Donnell et al. 2011) [Model]

Pedrosa V, Clopath C (2017) The role of neuromodulators in cortical plasticity. A computational perspective. Front. Synaptic Neurosci. 8:38 [Journal]

   A simple model of neuromodulatory state-dependent synaptic plasticity (Pedrosa and Clopath, 2016) [Model]

Sadeh S, Clopath C, Rotter S (2015) Emergence of Functional Specificity in Balanced Networks with Synaptic Plasticity. PLoS Comput Biol 11:e1004307 [Journal] [PubMed]

   Functional balanced networks with synaptic plasticity (Sadeh et al, 2015) [Model]

Saudargiene A, Porr B, Wörgötter F (2004) How the shape of pre- and postsynaptic signals can influence STDP: a biophysical model. Neural Comput 16:595-625 [Journal] [PubMed]

Solinas SMG, Edelmann E, Leßmann V, Migliore M (2019) A kinetic model for Brain-Derived Neurotrophic Factor mediated spike timing-dependent LTP. PLoS Comput Biol 15:e1006975 [Journal] [PubMed]

   STDP and BDNF in CA1 spines (Solinas et al. 2019) [Model]

Tamosiunaite M, Porr B, Wörgötter F (2007) Self-influencing synaptic plasticity: recurrent changes of synaptic weights can lead to specific functional properties. J Comput Neurosci 23:113-27 [Journal] [PubMed]

   Self-influencing synaptic plasticity (Tamosiunaite et al. 2007) [Model]

Tzilivaki A, Kastellakis G, Poirazi P (2019) Challenging the point neuron dogma: FS basket cells as 2-stage nonlinear integrators Nature Communications 10(1):3664 [Journal] [PubMed]

   Fast Spiking Basket cells (Tzilivaki et al 2019) [Model]

Urakubo H, Aihara T, Kuroda S, Watanabe M, Kondo S (2004) Spatial localization of synapses required for supralinear summation of action potentials and EPSPs. J Comput Neurosci 16:251-65 [Journal] [PubMed]

Urakubo H, Honda M, Froemke RC, Kuroda S (2008) Requirement of an allosteric kinetics of NMDA receptors for spike timing-dependent plasticity. J Neurosci 28:3310-23 [Journal] [PubMed]

   An allosteric kinetics of NMDARs in STDP (Urakubo et al. 2008) [Model]

Wilmes KA, Sprekeler H, Schreiber S (2016) Inhibition as a Binary Switch for Excitatory Plasticity in Pyramidal Neurons. PLoS Comput Biol 12:e1004768 [Journal] [PubMed]

   Inhibition of bAPs and Ca2+ spikes in a multi-compartment pyramidal neuron model (Wilmes et al 2016) [Model]

Wörgötter F, Porr B (2005) Temporal sequence learning, prediction, and control: a review of different models and their relation to biological mechanisms. Neural Comput 17:245-319 [Journal] [PubMed]

Yu X, Shouval HZ, Knierim JJ (2008) A biophysical model of synaptic plasticity and metaplasticity can account for the dynamics of the backward shift of hippocampal place fields. J Neurophysiol 100:983-92 [Journal] [PubMed]

Zhou YD, Acker CD, Netoff TI, Sen K, White JA (2005) Increasing Ca2+ transients by broadening postsynaptic action potentials enhances timing-dependent synaptic depression. Proc Natl Acad Sci U S A 102:19121-5 [Journal] [PubMed]

(38 refs)