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De Schutter E, Bower JM (1994) An active membrane model of the cerebellar Purkinje cell. I. Simulation of current clamps in slice. J Neurophysiol 71:375-400[PubMed]

   Cerebellar purkinje cell (De Schutter and Bower 1994)

References and models cited by this paper

References and models that cite this paper

Adams PR, Constanti A, Brown DA, Clark RB (1982) Intracellular Ca2+ activates a fast voltage-sensitive K+ current in vertebrate sympathetic neurones. Nature 296:746-9 [PubMed]

Adelman JP, Shen KZ, Kavanaugh MP, Warren RA, Wu YN, Lagrutta A, Bond CT, North RA (1992) Calcium-activated potassium channels expressed from cloned complementary DNAs. Neuron 9:209-16 [PubMed]

Aldrich RW, Stevens CF (1987) Voltage-dependent gating of single sodium channels from mammalian neuroblastoma cells. J Neurosci 7:418-31 [PubMed]

Alzheimer C, Schwindt PC, Crill WE (1993) Modal gating of Na+ channels as a mechanism of persistent Na+ current in pyramidal neurons from rat and cat sensorimotor cortex. J Neurosci 13:660-73 [PubMed]

Bernander O, Douglas RJ, Martin KA, Koch C (1991) Synaptic background activity influences spatiotemporal integration in single pyramidal cells. Proc Natl Acad Sci U S A 88:11569-73 [PubMed]

Bhalla US, Bilitch DH, Bower JM (1992) Rallpacks: a set of benchmarks for neuronal simulators. Trends Neurosci 15:453-8 [PubMed]

Bhalla US, Bower JM (1993) Exploring parameter space in detailed single neuron models: simulations of the mitral and granule cells of the olfactory bulb. J Neurophysiol 69:1948-65 [Journal] [PubMed]

   Granule Cells of the Olfactory Bulb (Simoes_De_Souza et al. 2014) [Model]
   Olfactory Mitral Cell (Bhalla, Bower 1993) [Model]

Bossu JL, Dupont JL, Feltz A (1989) Calcium currents in rat cerebellar Purkinje cells maintained in culture. Neuroscience 30:605-17 [PubMed]

Bower JM, Koch C (1992) Experimentalists and modelers: can we all just get along? Trends Neurosci 15:458-61 [PubMed]

Bush PC, Sejnowski TJ (1991) Simulations of a reconstructed cerebellar Purkinje cell based on simplified channel kinetics Neural Comput 3:321-332

Calabrese RL, De Schutter E (1992) Motor-pattern-generating networks in invertebrates: modeling our way toward understanding. Trends Neurosci 15:439-45 [PubMed]

Chan CY, Hounsgaard J, Nicholson C (1988) Effects of electric fields on transmembrane potential and excitability of turtle cerebellar Purkinje cells in vitro. J Physiol 402:751-71 [PubMed]

Chen CF, Hess P (1990) Mechanism of gating of T-type calcium channels. J Gen Physiol 96:603-30 [PubMed]

Connor JA, Stevens CF (1971) Voltage clamp studies of a transient outward membrane current in gastropod neural somata. J Physiol 213:21-30 [PubMed]

Cooley JW, Dodge FA (1966) Digital computer solutions for excitation and propagation of the nerve impulse. Biophys J 6:583-99 [PubMed]

Crepel F, Penit-Soria J (1986) Inward rectification and low threshold calcium conductance in rat cerebellar Purkinje cells. An in vitro study. J Physiol 372:1-23 [PubMed]

De Schutter E (1986) Alternative equations for the molluscan ion currents described by Connor and Stevens. Brain Res 382:134-8 [PubMed]

De Schutter E, Angstadt JD, Calabrese RL (1993) A model of graded synaptic transmission for use in dynamic network simulations. J Neurophysiol 69:1225-35 [Journal] [PubMed]

De Schutter E, Bower JM (1994) An active membrane model of the cerebellar Purkinje cell II. Simulation of synaptic responses. J Neurophysiol 71:401-19 [Journal] [PubMed]

   Cerebellar purkinje cell (De Schutter and Bower 1994) [Model]

Farley J, Rudy B (1988) Multiple types of voltage-dependent Ca2+-activated K+ channels of large conductance in rat brain synaptosomal membranes. Biophys J 53:919-34 [PubMed]

Fortier LP, Tremblay JP, Rafrafi J, Hawkes R (1991) A monoclonal antibody to conotoxin reveals the distribution of a subset of calcium channels in the rat cerebellar cortex. Brain Res Mol Brain Res 9:209-15 [PubMed]

Fox AP, Nowycky MC, Tsien RW (1987) Kinetic and pharmacological properties distinguishing three types of calcium currents in chick sensory neurones. J Physiol 394:149-72 [PubMed]

Franciolini F (1988) Calcium and voltage dependence of single Ca2+-activated K+ channels from cultured hippocampal neurons of rat. Biochim Biophys Acta 943:419-27 [PubMed]

French CR, Sah P, Buckett KJ, Gage PW (1990) A voltage-dependent persistent sodium current in mammalian hippocampal neurons. J Gen Physiol 95:1139-57 [PubMed]

Fujita Y (1968) Activity of dendrites of single Purkinje cells and its relationship to so-called inactivation response in rabbit cerebellum. J Neurophysiol 31:131-41 [Journal] [PubMed]

Gahwiler BH, Llano I (1989) Sodium and potassium conductances in somatic membranes of rat Purkinje cells from organotypic cerebellar cultures. J Physiol 417:105-22 [PubMed]

Gola M, Ducreux C, Chagneux H (1990) Ca2(+)-activated K+ current involvement in neuronal function revealed by in situ single-channel analysis in Helix neurones. J Physiol 420:73-109 [PubMed]

Gruol DL, Deal CR (1990) Expression of calcium conductances in Purkinje neurons in culture Abstr Soc Neurosci 16:677-677

Gruol DL, Dionne VE, Yool AJ (1989) Multiple voltage-sensitive K+ channels regulate dendritic excitability in cerebellar Purkinje neurons. Neurosci Lett 97:97-102 [PubMed]

Gruol DL, Jacquin T, Yool AJ (1991) Single-channel K+ currents recorded from the somatic and dendritic regions of cerebellar Purkinje neurons in culture. J Neurosci 11:1002-15 [PubMed]

Gundappa-sulur G, Bower JM (1990) Differences in ultramorphology and dendritic termination sites of synapses associated with the ascending and parallel fiber segments of granule cell axons in the cerebellar cortex of the rat Abstr Soc Neurosci 16:896-896

Harris KM, Stevens JK (1988) Dendritic spines of rat cerebellar Purkinje cells: serial electron microscopy with reference to their biophysical characteristics. J Neurosci 8:4455-69 [PubMed]

Harvey RJ, Napper RM (1991) Quantitative studies on the mammalian cerebellum. Prog Neurobiol 36:437-63 [PubMed]

Hille B (1992) Potassium channels and chloride channels Ionic Channels of Excitable Membrane, Hille B, ed. pp.115

Hillman D, Chen S, Aung TT, Cherksey B, Sugimori M, Llinas RR (1991) Localization of P-type calcium channels in the central nervous system. Proc Natl Acad Sci U S A 88:7076-80 [PubMed]

Hines M (1984) Efficient computation of branched nerve equations. Int J Biomed Comput 15:69-76 [PubMed]

Hines M (1989) A program for simulation of nerve equations with branching geometries. Int J Biomed Comput 24:55-68 [PubMed]

Hirano T, Hagiwara S (1989) Kinetics and distribution of voltage-gated Ca, Na and K channels on the somata of rat cerebellar Purkinje cells. Pflugers Arch 413:463-9 [PubMed]

Hockberger PE, Nam SC (1991) Purkinje cell calcium currents: are they unique?. Abstr Soc Neurosci 17:1518-1518

Hockberger PE, Tseng HY, Connor JA (1989) Fura-2 measurements of cultured rat Purkinje neurons show dendritic localization of Ca2+ influx. J Neurosci 9:2272-84 [PubMed]

Hodgkin AL, Huxley AF (1952) A quantitative description of membrane current and its application to conduction and excitation in nerve. J Physiol 117:500-44 [Journal] [PubMed]

   Squid axon (Hodgkin, Huxley 1952) (LabAXON) [Model]
   Squid axon (Hodgkin, Huxley 1952) (NEURON) [Model]
   Squid axon (Hodgkin, Huxley 1952) (SNNAP) [Model]
   Squid axon (Hodgkin, Huxley 1952) used in (Chen et al 2010) (R language) [Model]
   Squid axon (Hodgkin, Huxley 1952) (SBML, XPP, other) [Model]

Holmes WR, Rall W (1992) Electrotonic models of neuronal dendrites and single neuron computation Single Neuron Computation, Mckenna T:Davis J:Zornetzer SF, ed. pp.7

Holmes WR, Woody CD (1989) Effects of uniform and non-uniform synaptic 'activation-distributions' on the cable properties of modeled cortical pyramidal neurons. Brain Res 505:12-22 [PubMed]

Hounsgaard J, Midtgaard J (1988) Intrinsic determinants of firing pattern in Purkinje cells of the turtle cerebellum in vitro. J Physiol 402:731-49 [PubMed]

Hudspeth AJ, Lewis RS (1988) Kinetic analysis of voltage- and ion-dependent conductances in saccular hair cells of the bull-frog, Rana catesbeiana. J Physiol 400:237-74 [PubMed]

Ikemoto Y, Ono K, Yoshida A, Akaike N (1989) Delayed activation of large-conductance Ca2+-activated K channels in hippocampal neurons of the rat. Biophys J 56:207-12 [PubMed]

Ito M (1984) The Cerebellum And Neural Control

Jaeger D, Bower JM (1991) Analysis of plateau potentials seen in intracellular Purkinje cell recordings with synaptic stimulation Abstr Soc Neurosci 17:1383

Kadowaki K, McGowan E, Mock G, Chandler S, Emson PC (1993) Distribution of calcium binding protein mRNAs in rat cerebellar cortex. Neurosci Lett 153:80-4 [PubMed]

Kaneda M, Wakamori M, Ito C, Akaike N (1990) Low-threshold calcium current in isolated Purkinje cell bodies of rat cerebellum. J Neurophysiol 63:1046-51 [Journal] [PubMed]

Kay AR, Sugimori M, Llinas RR (1990) Voltage clamp analysis of a persistent TTX-sensitive Na currrent in cerebellar Purkinje cells Abstr Soc Neurosci 16:182-182

Kay AR, Wong RK (1987) Calcium current activation kinetics in isolated pyramidal neurones of the Ca1 region of the mature guinea-pig hippocampus. J Physiol 392:603-16 [PubMed]

Knopfel T, Staub C, Gahwiler BH (1990) Spatial spread of voltage transients in cerebellar Purkinje cells Abstr Soc Neurosci 16:636-636

Konnerth A, Llano I, Armstrong CM (1990) Synaptic currents in cerebellar Purkinje cells. Proc Natl Acad Sci U S A 87:2662-5 [PubMed]

Lancaster B, Nicoll RA, Perkel DJ (1991) Calcium activates two types of potassium channels in rat hippocampal neurons in culture. J Neurosci 11:23-30 [PubMed]

Lando L, Zucker RS (1989) "Caged calcium" in Aplysia pacemaker neurons. Characterization of calcium-activated potassium and nonspecific cation currents. J Gen Physiol 93:1017-60 [PubMed]

Lang DG, Ritchie AK (1987) Large and small conductance calcium-activated potassium channels in the GH3 anterior pituitary cell line. Pflugers Arch 410:614-22 [PubMed]

Lasser-Ross N, Ross WN (1992) Imaging voltage and synaptically activated sodium transients in cerebellar Purkinje cells. Proc R Soc Lond B Biol Sci 247:35-9 [PubMed]

Latorre R, Oberhauser A, Labarca P, Alvarez O (1989) Varieties of calcium-activated potassium channels. Annu Rev Physiol 51:385-99 [PubMed]

Lev-Ram V, Miyakawa H, Lasser-Ross N, Ross WN (1992) Calcium transients in cerebellar Purkinje neurons evoked by intracellular stimulation. J Neurophysiol 68:1167-77 [Journal] [PubMed]

Li SJ, Wang Y, Strahlendorf HK, Strahlendorf JC (1990) A transient voltage-dependent outward current recorded from rat cerebellar Purkinje cells under voltage clamp Abstr Soc Neurosci 16:507-507

Linden DJ, Smeyne M, Sun SC, Connor JA (1992) An electrophysiological correlate of protein kinase C isozyme distribution in cultured cerebellar neurons. J Neurosci 12:3601-8 [PubMed]

Llano I, Dreessen J, Kano M, Konnerth A (1991) Intradendritic release of calcium induced by glutamate in cerebellar Purkinje cells. Neuron 7:577-83 [PubMed]

Llano I, Marty A, Armstrong CM, Konnerth A (1991) Synaptic- and agonist-induced excitatory currents of Purkinje cells in rat cerebellar slices. J Physiol 434:183-213 [PubMed]

Llinas R, Nicholson C (1971) Electrophysiological properties of dendrites and somata in alligator Purkinje cells. J Neurophysiol 34:532-51 [Journal] [PubMed]

Llinas R, Nicholson C (1976) Reversal properties of climbing fiber potential in cat Purkinje cells: an example of a distributed synapse. J Neurophysiol 39:311-23 [Journal] [PubMed]

Llinas R, Sugimori M (1979) Calcium conductances in Purkinje cell dendrites: their role in development and integration. Prog Brain Res 51:323-34 [PubMed]

Llinas R, Sugimori M (1980) Electrophysiological properties of in vitro Purkinje cell somata in mammalian cerebellar slices. J Physiol 305:171-95 [PubMed]

Llinas R, Sugimori M (1980) Electrophysiological properties of in vitro Purkinje cell dendrites in mammalian cerebellar slices. J Physiol 305:197-213 [PubMed]

Llinas R, Sugimori M, Lin JW, Cherksey B (1989) Blocking and isolation of a calcium channel from neurons in mammals and cephalopods utilizing a toxin fraction (FTX) from funnel-web spider poison. Proc Natl Acad Sci U S A 86:1689-93 [PubMed]

Llinas R, Sugimori M, Silver RB (1992) Microdomains of high calcium concentration in a presynaptic terminal. Science 256:677-9 [PubMed]

Llinas RR (1981) Electrophysiology of the cerebellar networks Handbook Of Physiology The Nervous System Ii Motor Control, Brooks VB, ed. pp.831

Llinas RR, Sugimori M (1992) The electrophysiology of the cerebellar Purkinje cell revisited The Cerebellum Revisited, Llinas RRANDSOTELOC, ed. pp.167

Llinas RR, Sugimori M, Cherksey B (1989) Voltage-dependent calcium conductances in mammalian neurons. The P channel. Ann N Y Acad Sci 560:103-11 [PubMed]

Lytton WW, Sejnowski TJ (1991) Simulations of cortical pyramidal neurons synchronized by inhibitory interneurons. J Neurophysiol 66:1059-79 [Journal] [PubMed]

McCormick DA, Huguenard JR (1992) A model of the electrophysiological properties of thalamocortical relay neurons. J Neurophysiol 68:1384-400 [Journal] [PubMed]

McManus OB, Magleby KL (1989) Kinetic time constants independent of previous single-channel activity suggest Markov gating for a large conductance Ca-activated K channel. J Gen Physiol 94:1037-70 [PubMed]

Mintz IM, Venema VJ, Swiderek KM, Lee TD, Bean BP, Adams ME (1992) P-type calcium channels blocked by the spider toxin omega-Aga-IVA. Nature 355:827-9 [PubMed]

Miyakawa H, Lev-Ram V, Lasser-Ross N, Ross WN (1992) Calcium transients evoked by climbing fiber and parallel fiber synaptic inputs in guinea pig cerebellar Purkinje neurons. J Neurophysiol 68:1178-89 [Journal] [PubMed]

Moczydlowski E, Latorre R (1983) Gating kinetics of Ca2+-activated K+ channels from rat muscle incorporated into planar lipid bilayers. Evidence for two voltage-dependent Ca2+ binding reactions. J Gen Physiol 82:511-42 [Journal] [PubMed]

   Ca-dependent K Channel: kinetics from rat muscle (Moczydlowski, Latorre 1983) NEURON [Model]
   Ca-dependent K Channel: kinetics from rat muscle (Moczydlowski, Latorre 1983) XPP [Model]

Muller W, Connor JA (1991) Dendritic spines as individual neuronal compartments for synaptic Ca2+ responses. Nature 354:73-6 [PubMed]

Neumcke B, Stampfli R (1982) Sodium currents and sodium-current fluctuations in rat myelinated nerve fibres. J Physiol 329:163-84 [PubMed]

Palay SL, Chan-palay V (1974) Cerebellar Cortex Cytology And Organization :348

Pellionisz A, Llinas R (1977) A computer model of cerebellar Purkinje cells. Neuroscience 2:37-48 [PubMed]

Pennefather P, Sala F, Hernandez-cruz A (1990) A computer simulation of IAHP kinetics Abstr Soc Neurosci 10:10-10

Perkel DH, Mulloney B, Budelli RW (1981) Quantitative methods for predicting neuronal behavior. Neuroscience 6:823-37 [PubMed]

RALL W (1962) Theory of physiological properties of dendrites. Ann N Y Acad Sci 96:1071-92 [PubMed]

Rall W (1964) Theoretical significance of dendritic trees for neuronal input output relations Neural Theory and Modeling, Reiss RF, ed. pp.73 [Journal]

   Effects of synaptic location and timing on synaptic integration (Rall 1964) [Model]

Rall W, Segev I (1985) Space-clamp problems when voltage clamping branched neurons with intracellular microelectrodes Voltage And Patch Clamping With Microelectrodes, Smith TG:Lecar H:Redman SJ:Gage P, ed. pp.191

Rapp M, Segev I, Yarom Y (1994) Physiology, morphology and detailed passive models of guinea-pig cerebellar Purkinje cells. J Physiol 474:101-18 [PubMed]

Rapp M, Yarom Y, Segev I (1992) The impact of parallel fiber background activity on the cable properties of cerebellar Purkinje cells Neural Comput 4:518-533

Regan LJ (1991) Voltage-dependent calcium currents in Purkinje cells from rat cerebellar vermis. J Neurosci 11:2259-69 [PubMed]

Regehr WG, Konnerth A, Armstrong CM (1992) Sodium action potentials in the dendrites of cerebellar Purkinje cells. Proc Natl Acad Sci U S A 89:5492-6 [PubMed]

Reinhart PH, Chung S, Levitan IB (1989) A family of calcium-dependent potassium channels from rat brain. Neuron 2:1031-41 [PubMed]

Rogawski MA (1985) The A-current: how ubiquitous a feature of excitable cells is it? Trends Neurosci 8:214-219

Ross CA, Meldolesi J, Milner TA, Satoh T, Supattapone S, Snyder SH (1989) Inositol 1,4,5-trisphosphate receptor localized to endoplasmic reticulum in cerebellar Purkinje neurons. Nature 339:468-70 [PubMed]

Ross WN, Lasser-Ross N, Werman R (1990) Spatial and temporal analysis of calcium-dependent electrical activity in guinea pig Purkinje cell dendrites. Proc R Soc Lond B Biol Sci 240:173-85 [PubMed]

Sah P, Gibb AJ, Gage PW (1988) The sodium current underlying action potentials in guinea pig hippocampal CA1 neurons. J Gen Physiol 91:373-98 [PubMed]

Sala F, Hernandez-Cruz A (1990) Calcium diffusion modeling in a spherical neuron. Relevance of buffering properties. Biophys J 57:313-24 [PubMed]

Schutter DEE, Bower JM (1991) A computer simulation of plateau potentials and synaptic interactions in Purkinje cell spiny dendrites Abstr Soc Neurosci 17:1383-1383

Segev I, Fleshman JW, Miller JP, Bunow B (1985) Modeling the electrical behavior of anatomically complex neurons using a network analysis program: passive membrane. Biol Cybern 53:27-40 [PubMed]

Shelton DP (1985) Membrane resistivity estimated for the Purkinje neuron by means of a passive computer model. Neuroscience 14:111-31 [PubMed]

Shepherd GM (1990) The Synaptic Organization Of The Brain

Sholl DA (1953) Dendritic organization in the neurons of the visual and motor cortices of the cat J Anat 87:387-406

Smart TG (1987) Single calcium-activated potassium channels recorded from cultured rat sympathetic neurones. J Physiol 389:337-60 [PubMed]

Somogyi P, Hamori J (1976) A quantitative electron microscopic study of the Purkinje axon initial segment. Neurosci :361-365

Spain WJ, Schwindt PC, Crill WE (1987) Anomalous rectification in neurons from cat sensorimotor cortex in vitro. J Neurophysiol 57:1555-76 [Journal] [PubMed]

Staub C, Vranesic I, Knopfel T (1992) Responses to Metabotropic Glutamate Receptor Activation in Cerebellar Purkinje Cells: Induction of an Inward Current. Eur J Neurosci 4:832-839 [PubMed]

Sugimori M, Llinas RR (1990) Real-time imaging of calcium influx in mammalian cerebellar Purkinje cells in vitro. Proc Natl Acad Sci U S A 87:5084-8 [PubMed]

Sugimori M, Llinas RR (1992) Dual patch clamping of mammalian Purkinje cells in cerebellar slices Abstr Soc Neurosci 18:1358-1358

Takei K, Stukenbrok H, Metcalf A, Mignery GA, Sudhof TC, Volpe P, De Camilli P (1992) Ca2+ stores in Purkinje neurons: endoplasmic reticulum subcompartments demonstrated by the heterogeneous distribution of the InsP3 receptor, Ca(2+)-ATPase, and calsequestrin. J Neurosci 12:489-505 [PubMed]

Tank DW, Sugimori M, Connor JA, Llinas RR (1988) Spatially resolved calcium dynamics of mammalian Purkinje cells in cerebellar slice. Science 242:773-7 [PubMed]

Thompson JH, Bower JM (1991) Prolonged simple spike responses to activation of the granule cell layer in the rat cerebellum Abstr Soc Neurosci 17:1383-1383

Traub RD (1982) Simulation of intrinsic bursting in CA3 hippocampal neurons. Neuroscience 7:1233-42 [PubMed]

Traub RD, Wong RK, Miles R, Michelson H (1991) A model of a CA3 hippocampal pyramidal neuron incorporating voltage-clamp data on intrinsic conductances. J Neurophysiol 66:635-50 [Journal] [PubMed]

Usowicz MM, Sugimori M, Cherksey B, Llinas R (1992) P-type calcium channels in the somata and dendrites of adult cerebellar Purkinje cells. Neuron 9:1185-99 [PubMed]

Usowicz MM, Sugimori M, Cherksey B, Llinas RR (1992) Characterization of P-type calcium channels in cerebellar Purkinje cells. Abstr Soc Neurosci 18:974-974

Vranesic I, Batchelor A, Gahwiler BH, Garthwaite J, Staub C, Knopfel T (1991) Trans-ACPD-induced Ca2+ signals in cerebellar Purkinje cells. Neuroreport 2:759-62 [PubMed]

Vranesic I, Knopfel T (1991) Calculation of calcium dynamics from single wavelength fura-2 fluorescence recordings. Pflugers Arch 418:184-9 [PubMed]

Wang Y, Strahlendorf JC, Strahlendorf HK (1991) A transient voltage-dependent outward potassium current in mammalian cerebellar Purkinje cells. Brain Res 567:153-8 [PubMed]

Wilson MA, Bhalla US, Uhley JD, Bower JM (1989) GENESIS: a system for simulating neural networks Advances In Neural Information Processing Systems, Touretzky D, ed. pp.485

Wilson MA, Bower JM (1989) The simulation of large-scale neuronal networks Methods In Neuronal Modeling: From Synapses To Networks, Koch C:Segev I, ed. pp.291

Yamada WM, Koch C, Adams PR (1989) Multiple channels and calcium dynamics Methods In Neuronal Modeling: From Synapses To Networks, Koch C:Segev I, ed. pp.97

Alturki A, Feng F, Nair A, Guntu V, Nair SS (2016) Distinct current modules shape cellular dynamics in model neurons. Neuroscience 334:309-331 [Journal] [PubMed]

   Distinct current modules shape cellular dynamics in model neurons (Alturki et al 2016) [Model]

Anwar H, Hong S, De Schutter E (2012) Controlling Ca(2+)-Activated K (+) Channels with Models of Ca (2+) Buffering in Purkinje Cells. Cerebellum 11:681-693 [Journal] [PubMed]

   Controlling KCa channels with different Ca2+ buffering models in Purkinje cell (Anwar et al. 2012) [Model]

Anwar H, Roome CJ, Nedelescu H, Chen W, Kuhn B, De Schutter E (2014) Dendritic diameters affect the spatial variability of intracellular calcium dynamics in computer models Frontiers in Cellular Neuroscience 8(168):1-14 [Journal] [PubMed]

   Calcium dynamics depend on dendritic diameters (Anwar et al. 2014) [Model]

Aradi I, Holmes WR (1999) Role of multiple calcium and calcium-dependent conductances in regulation of hippocampal dentate granule cell excitability. J Comput Neurosci 6:215-35 [Journal] [PubMed]

   Dentate gyrus granule cell: calcium and calcium-dependent conductances (Aradi and Holmes 1999) [Model]

Blackwell KT (2001) Evidence for a distinct light-induced calcium-dependent potassium current in Hermissenda crassicornis. J Comput Neurosci 9:149-70 [Journal] [PubMed]

Brette R, Rudolph M, Carnevale T, Hines M, Beeman D, Bower JM, Diesmann M, Morrison A, et al. (2007) Simulation of networks of spiking neurons: A review of tools and strategies. J Comp Neurosci 23:349-98 [Journal] [PubMed]

   Networks of spiking neurons: a review of tools and strategies (Brette et al. 2007) [Model]

Brown SA, Moraru II, Schaff JC, Loew LM (2011) Virtual NEURON: a strategy for merged biochemical and electrophysiological modeling. J Comput Neurosci 31(2):385-400 [Journal] [PubMed]

   A simplified cerebellar Purkinje neuron (the PPR model) (Brown et al. 2011) [Model]

Chono K, Takagi H, Koyama S, Suzuki H, Ito E (2003) A cell model study of calcium influx mechanism regulated by calcium-dependent potassium channels in Purkinje cell dendrites J Neurosci Methods 129:115-127 [Journal] [PubMed]

Coop AD, Reeke GN (2001) The composite neuron: a realistic one-compartment Purkinje cell model suitable for large-scale neuronal network simulations. J Comput Neurosci 10:173-86 [Journal] [PubMed]

Couto J, Linaro D, De Schutter E, Giugliano M (2015) On the Firing Rate Dependency Of the Phase Response Curves of rat Purkinje Neurons In Vitro PLOS Comp Biol [Journal] [PubMed]

   Phase response curves firing rate dependency of rat purkinje neurons in vitro (Couto et al 2015) [Model]

Davison A (2004) Biologically-detailed network modelling (Chapter 10) Computation Neuroscience: A Comprehensive Approach, Feng J, ed. pp.287

De Schutter E (1997) A new functional role for cerebellar long-term depression. Prog Brain Res 114:529-42 [PubMed]

   Cerebellar purkinje cell (De Schutter and Bower 1994) [Model]

De Schutter E (1998) Dendritic voltage and calcium-gated channels amplify the variability of postsynaptic responses in a Purkinje cell model. J Neurophysiol 80:504-19 [Journal] [PubMed]

   Cerebellar purkinje cell (De Schutter and Bower 1994) [Model]

De Schutter E (1999) Using realistic models to study synaptic integration in cerebellar Purkinje cells. Rev Neurosci 10:233-45 [PubMed]

De Schutter E (2014) The dangers of plug-and-play simulation using shared models. Neuroinformatics 12:227-8 [Journal] [PubMed]

De Schutter E, Smolen P (1998) Calcium dynamics in large neuronal models Methods In Neuronal Modeling: From Ions To Networks, Koch C:Segev I, ed. pp.211

Desjardins AE, Li YX, Reinker S, Miura RM, Neuman RS (2003) The Influences of Ih on Temporal Summation in Hippocampal CA1 Pyramidal Neurons: A Modeling Study. J Comput Neurosci 15:131-42 [Journal] [PubMed]

Doiron B, Longtin A, Turner RW, Maler L (2001) Model of gamma frequency burst discharge generated by conditional backpropagation. J Neurophysiol 86:1523-45 [Journal] [PubMed]

Engel J, Schultens HA, Schild D (1999) Small conductance potassium channels cause an activity-dependent spike frequency adaptation and make the transfer function of neurons logarithmic. Biophys J 76:1310-9 [PubMed]

Forrest MD (2015) Simulation of alcohol action upon a detailed Purkinje neuron model and a simpler surrogate model that runs >400 times faster BMC Neuroscience 16:27 [Journal] [PubMed]

   Alcohol action in a detailed Purkinje neuron model and an efficient simplified model (Forrest 2015) [Model]

Friedrich P, Vella M, Gulyas AI, Freund TF, Kali S (2014) A flexible, interactive software tool for fitting the parameters of neuronal models. Front Neuroinform 8:63 [Journal] [PubMed]

   Software (called Optimizer) for fitting neuronal models (Friedrich et al. 2014) [Model]

Genet S, Delord B (2002) A biophysical model of nonlinear dynamics underlying plateau potentials and calcium spikes in purkinje cell dendrites. J Neurophysiol 88:2430-44 [Journal] [PubMed]

Genet S, Sabarly L, Guigon E, Berry H, Delord B (2010) Dendritic signals command firing dynamics in a mathematical model of cerebellar Purkinje cells. Biophys J 99:427-36 [PubMed]

   Dendritic signals command firing dynamics in a Cerebellar Purkinje Cell model (Genet et al. 2010) [Model]

Gleeson P, Crook S, Cannon RC, Hines ML, Billings GO, Farinella M, Morse TM, Davison AP, Ray (2010) NeuroML: a language for describing data driven models of neurons and networks with a high degree of biological detail. PLoS Comput Biol 6:e1000815 [Journal] [PubMed]

Gleeson P, Steuber V, Silver RA (2007) neuroConstruct: a tool for modeling networks of neurons in 3D space. Neuron 54:219-35 [Journal] [PubMed]

Guet-McCreight A, Camire O, Topolnik L, Skinner FK (2016) Using a Semi-Automated Strategy to Develop Multi-Compartment Models That Predict Biophysical Properties of Interneuron-Specific 3 (IS3) Cells in Hippocampus. eNeuro [Journal] [PubMed]

   Interneuron Specific 3 Interneuron Model (Guet-McCreight et al, 2016) [Model]

Gunay C, Edgerton JR, Jaeger D (2008) Channel density distributions explain spiking variability in the globus pallidus: a combined physiology and computer simulation database approach. J Neurosci 28:7476-91 [Journal] [PubMed]

   Globus pallidus multi-compartmental model neuron with realistic morphology (Gunay et al. 2008) [Model]

Haag J, Theunissen F, Borst A (1997) The intrinsic electrophysiological characteristics of fly lobula plate tangential cells: II. Active membrane properties. J Comput Neurosci 4:349-69 [Journal] [PubMed]

   Fly lobular plate VS cell (Borst and Haag 1996, et al. 1997, et al. 1999) [Model]

Halnes G, Augustinaite S, Heggelund P, Einevoll GT, Migliore M (2011) A Multi-Compartment Model for Interneurons in the Dorsal Lateral Geniculate Nucleus PLoS Comp. Biol. 7(9):e1002160 [Journal] [PubMed]

   A multi-compartment model for interneurons in the dLGN (Halnes et al. 2011) [Model]

Hay E, Schurmann F, Markram H, Segev I (2013) Preserving Axo-somatic Spiking Features Despite Diverse Dendritic Morphology. J Neurophysiol 109(12):2972-81 [Journal] [PubMed]

   Preserving axosomatic spiking features despite diverse dendritic morphology (Hay et al., 2013) [Model]

Huang S, Hong S, De Schutter E (2015) Non-linear leak currents affect mammalian neuron physiology. Front Cell Neurosci 9:432 [Journal] [PubMed]

   Concentration dependent nonlinear K+ and Cl- leak current (Huang et al. 2015) [Model]

Jaeger D (2003) No Parallel Fiber Volleys in the Cerebellar Cortex: Evidence from Cross-Correlation Analysis between Purkinje Cells in a Computer Model and in Recordings from Anesthetized Rats Journal of Computational Neuroscience 14:311-327 [Journal]

Khaliq ZM, Gouwens NW, Raman IM (2003) The contribution of resurgent sodium current to high-frequency firing in Purkinje neurons: an experimental and modeling study. J Neurosci 23:4899-912 [PubMed]

   Cerebellar Purkinje Cell: resurgent Na current and high frequency firing (Khaliq et al 2003) [Model]

Kotter R (1999) Motor fluctuations in Parkinson's disease: a postsynaptic mechanism derived from a striatal model. Prog Brain Res 121:277-88

Kotter R, Feizelmeier M (1998) Species-dependence and relationship of morphological and electrophysiological properties in nigral compacta neurons. Prog Neurobiol 54:619-32 [PubMed]

Kozloski J, Wagner J (2011) An Ultrascalable Solution to Large-scale Neural Tissue Simulation. Front Neuroinform 5:15 [Journal] [PubMed]

Maex R, De Schutter E (1998) Synchronization of golgi and granule cell firing in a detailed network model of the cerebellar granule cell layer. J Neurophysiol 80:2521-37 [Journal] [PubMed]

   Network model of the granular layer of the cerebellar cortex (Maex, De Schutter 1998) [Model]
   Cerebellar granular layer (Maex and De Schutter 1998) [Model]

Mainen ZF, Joerges J, Huguenard JR, Sejnowski TJ (1995) A model of spike initiation in neocortical pyramidal neurons. Neuron 15:1427-39 [PubMed]

   Spike Initiation in Neocortical Pyramidal Neurons (Mainen et al 1995) [Model]

Mandelblat Y, Etzion Y, Grossman Y, Golomb D (2001) Period Doubling of Calcium Spike Firing in a Model of a Purkinje Cell Dendrite J Comput Neurosci 11:43-62 [Journal]

Manninen T, Hituri K, Kotaleski JH, Blackwell KT, Linne ML (2010) Postsynaptic signal transduction models for long-term potentiation and depression. Front Comput Neurosci 4:152 [Journal] [PubMed]

Masoli S, Solinas S, D'Angelo E (2015) Action potential processing in a detailed Purkinje cell model reveals a critical role for axonal compartmentalization. Front Cell Neurosci 9:47 [Journal] [PubMed]

   A detailed Purkinje cell model (Masoli et al 2015) [Model]

Masurkar AV, Chen WR (2011) Calcium currents of olfactory bulb juxtaglomerular cells: Profile and multiple conductance plateau potential simulation. Neuroscience 192:231-46 [Journal] [PubMed]

   Calcium and potassium currents of olfactory bulb juxtaglomerular cells (Masurkar and Chen 2011) [Model]

Meuth SG, Bittner S, Meuth P, Simon OJ, Budde T, Wiendl H (2008) TWIK-related acid-sensitive K+ channel 1 (TASK1) and TASK3 critically influence T lymphocyte effector functions. J Biol Chem 283:14559-70 [PubMed]

Miyasho T, Takagi H, Suzuki H, Watanabe S, Inoue M, Kudo Y, Miyakawa H (2001) Low-threshold potassium channels and a low-threshold calcium channel regulate Ca2+ spike firing in the dendrites of cerebellar Purkinje neurons: a modeling study. Brain Res 891:106-15 [Journal] [PubMed]

   Cerebellar purkinje cell: K and Ca channels regulate APs (Miyasho et al 2001) [Model]

Santamaria F, Jaeger D, De Schutter E, Bower JM (2002) Modulatory effects of parallel fiber and molecular layer interneuron synaptic activity on purkinje cell responses to ascending segment input: a modeling study. J Comput Neurosci 13:217-35 [Journal]

Santamaria F, Tripp PG, Bower JM (2007) Feedforward inhibition controls the spread of granule cell-induced purkinje cell activity in the cerebellar cortex. J Neurophysiol 97:248-63 [Journal] [PubMed]

Shapiro BE (2001) Osmotic forces and gap junctions in spreading depression: a computational model. J Comput Neurosci 10:99-120 [Journal] [PubMed]

Staub C, De Schutter E, Knopfel T (1994) Voltage-imaging and simulation of effects of voltage- and agonist-activated conductances on soma-dendritic voltage coupling in cerebellar Purkinje cells. J Comput Neurosci 1:301-11 [Journal] [PubMed]

   Cerebellar purkinje cell (De Schutter and Bower 1994) [Model]

Sterratt D, Graham B, Gillies A, Willshaw D (2011) Principles of Computational Modelling in Neuroscience, Cambridge University Press :1-401 [Journal]

   Principles of Computational Modelling in Neuroscience (Book) (Sterratt et al. 2011) [Model]

Tobin AE, Van Hooser SD, Calabrese RL (2006) Creation and reduction of a morphologically detailed model of a leech heart interneuron. J Neurophysiol 96:2107-20 [Journal] [PubMed]

Toth TI, Crunelli V (1999) Solution of the nerve cable equation using Chebyshev approximations. J Neurosci Methods 87:119-36 [PubMed]

Traub RD, Middleton SJ, Knopfel T, Whittington MA (2008) Model of very fast (greater than 75 Hz) network oscillations generated by electrical coupling between the proximal axons of cerebellar Purkinje cells. Eur J Neurosci 28:1603-16 [Journal]

   Axonal gap junctions produce fast oscillations in cerebellar Purkinje cells (Traub et al. 2008) [Model]

van Ooyen A, Duijnhouwer J, Remme MW, van Pelt J (2002) The effect of dendritic topology on firing patterns in model neurons. Network 13:311-25 [PubMed]

Washington SD, Ascoli GA, Krichmar JL (2000) Statistical Analysis of Dendritic Morphology's Effect on CA3 Pyramidal Cell Electrophysiology Neurocomputing 32:261-269

Williams SR, Christensen SR, Stuart GJ, Hausser M (2002) Membrane potential bistability is controlled by the hyperpolarization-activated current I(H) in rat cerebellar Purkinje neurons in vitro. J Physiol 539:469-83 [PubMed]

Willms AR (2002) NEUROFIT: software for fitting Hodgkin-Huxley models to voltage-clamp data. J Neurosci Methods 121:139-50 [PubMed]

   NEUROFIT: fitting HH models to voltage clamp data (Willms 2002) [Model]

Winslow JL, Jou SF, Wang S, Wojtowicz JM (1999) Signals in stochastically generated neurons. J Comput Neurosci 6:5-26 [Journal] [PubMed]

Wustenberg DG, Boytcheva M, Grunewald B, Byrne JH, Menzel R, Baxter DA (2004) Current- and voltage-clamp recordings and computer simulations of Kenyon cells in the honeybee. J Neurophysiol : [Journal] [PubMed]

   Kenyon cells in the honeybee (Wustenberg et al 2004) [Model]

Yang CR, Seamans JK, Gorelova N (1999) Developing a neuronal model for the pathophysiology of schizophrenia based on the nature of electrophysiological actions of dopamine in the prefrontal cortex. Neuropsychopharmacology 21:161-94 [PubMed]

(182 refs)