Citation Relationships



Stratford KJ, Mason AJR, Larkman AU, Major G, Jack JJB (1989) The modelling of pyramidal neurones in the visual cortex The Computing Neuron, Durbin R:Miall C:Mitchison G, ed. pp.296

References and models cited by this paper

References and models that cite this paper

Amatrudo JM, Weaver CM, Crimins JL, Hof PR, Rosene DL, Luebke JI (2012) Influence of highly distinctive structural properties on the excitability of pyramidal neurons in monkey visual and prefrontal cortices. J Neurosci 32:13644-60 [Journal] [PubMed]

  • Rhesus Monkey Layer 3 Pyramidal Neurons: V1 vs PFC (Amatrudo, Weaver et al. 2012) [Model]

Bahl A, Stemmler MB, Herz AV, Roth A (2012) Automated optimization of a reduced layer 5 pyramidal cell model based on experimental data. J Neurosci Methods 210:22-34 [Journal] [PubMed]

  • A set of reduced models of layer 5 pyramidal neurons (Bahl et al. 2012) [Model]

Banitt Y, Martin KA, Segev I (2007) A biologically realistic model of contrast invariant orientation tuning by thalamocortical synaptic depression. J Neurosci 27:10230-9 [Journal] [PubMed]

  • Contrast invariance by LGN synaptic depression (Banitt et al. 2007) [Model]

Bernander O, Koch C, Douglas RJ (1994) Amplification and linearization of distal synaptic input to cortical pyramidal cells. J Neurophysiol 72:2743-53 [Journal] [PubMed]

Borst A, Haag J (1996) The intrinsic electrophysiological characteristics of fly lobula plate tangential cells: I. Passive membrane properties. J Comput Neurosci 3:313-36 [PubMed]

  • Fly lobular plate VS cell (Borst and Haag 1996, et al. 1997, et al. 1999) [Model]

Brown SA, Moraru II, Schaff JC, Loew LM (2011) Virtual NEURON: a strategy for merged biochemical and electrophysiological modeling. J Comput Neurosci 31:385-400 [Journal] [PubMed]

  • A simplified cerebellar Purkinje neuron (the PPR model) (Brown et al. 2011) [Model]

Burke RE (2000) Comparison of alternative designs for reducing complex neurons to equivalent cables. J Comput Neurosci 9:31-47 [PubMed]

Bush PC, Sejnowski TJ (1993) Reduced compartmental models of neocortical pyramidal cells. J Neurosci Methods 46:159-66 [PubMed]

Bush PC, Sejnowski TJ (1994) Effects of inhibition and dendritic saturation in simulated neocortical pyramidal cells. J Neurophysiol 71:2183-93 [Journal] [PubMed]

Carnevale NT, Tsai KY, Claiborne BJ, Brown TH (1997) Comparative electrotonic analysis of three classes of rat hippocampal neurons. J Neurophysiol 78:703-20 [Journal] [PubMed]

Cauller LJ, Connors BW (1994) Synaptic physiology of horizontal afferents to layer I in slices of rat SI neocortex. J Neurosci 14:751-62 [PubMed]

Chitwood RA, Hubbard A, Jaffe DB (1999) Passive electrotonic properties of rat hippocampal CA3 interneurones. J Physiol 515 ( Pt 3):743-56 [PubMed]

Coskren PJ, Luebke JI, Kabaso D, Wearne SL, Yadav A, Rumbell T, Hof PR, Weaver CM (2015) Functional consequences of age-related morphologic changes to pyramidal neurons of the rhesus monkey prefrontal cortex. J Comput Neurosci 38:263-83 [Journal] [PubMed]

  • Rhesus Monkey Layer 3 Pyramidal Neurons: Young vs aged PFC (Coskren et al. 2015) [Model]

Davison A (2004) Biologically-detailed network modelling (Chapter 10) Computation Neuroscience: A Comprehensive Approach, Feng J, ed. pp.287

Davison AP, Feng J, Brown D (2000) A reduced compartmental model of the mitral cell for use in network models of the olfactory bulb. Brain Res Bull 51:393-9 [PubMed]

  • Olfactory Mitral Cell (Davison et al 2000) [Model]

Destexhe A (2001) Simplified models of neocortical pyramidal cells preserving somatodendritic voltage attenuation Neurocomputing 38-40:167-173

Destexhe A, Contreras D, Steriade M, Sejnowski TJ, Huguenard JR (1996) In vivo, in vitro, and computational analysis of dendritic calcium currents in thalamic reticular neurons. J Neurosci 16:169-85 [Journal] [PubMed]

  • Thalamic reticular neurons: the role of Ca currents (Destexhe et al 1996) [Model]

Haag J, Theunissen F, Borst A (1997) The intrinsic electrophysiological characteristics of fly lobula plate tangential cells: II. Active membrane properties. J Comput Neurosci 4:349-69 [PubMed]

  • Fly lobular plate VS cell (Borst and Haag 1996, et al. 1997, et al. 1999) [Model]

Holmes WR, Ambros-Ingerson J, Grover LM (2006) Fitting experimental data to models that use morphological data from public databases. J Comput Neurosci 20:349-65 [Journal] [PubMed]

Inoue M, Hashimoto Y, Kudo Y, Miyakawa H (2001) Dendritic attenuation of synaptic potentials in the CA1 region of rat hippocampal slices detected with an optical method. Eur J Neurosci 13:1711-21 [PubMed]

Jackson ME, Cauller LJ (1997) Evaluation of simplified compartmental models of reconstructed neocortical neurons for use in large-scale simulations of biological neural networks. Brain Res Bull 44:7-17 [PubMed]

Kim HG, Connors BW (1993) Apical dendrites of the neocortex: correlation between sodium- and calcium-dependent spiking and pyramidal cell morphology. J Neurosci 13:5301-11 [PubMed]

London M, Schreibman A, Häusser M, Larkum ME, Segev I (2002) The information efficacy of a synapse. Nat Neurosci 5:332-40 [Journal] [PubMed]

Major G, Polsky A, Denk W, Schiller J, Tank DW (2008) Spatiotemporally graded NMDA spike/plateau potentials in basal dendrites of neocortical pyramidal neurons. J Neurophysiol 99:2584-601 [Journal] [PubMed]

Marasco A, Limongiello A, Migliore M (2012) Fast and accurate low-dimensional reduction of biophysically detailed neuron models. Sci Rep 2:928 [Journal] [PubMed]

  • Ca1 pyramidal neuron: reduction model (Marasco et al. 2012) [Model]

Marasco A, Limongiello A, Migliore M (2013) Using Strahler's analysis to reduce up to 200-fold the run time of realistic neuron models. Sci Rep 3:2934 [Journal] [PubMed]

  • Using Strahler's analysis to reduce realistic models (Marasco et al, 2013) [Model]

Mel BW (1993) Synaptic integration in an excitable dendritic tree. J Neurophysiol 70:1086-101 [Journal] [PubMed]

Mel BW, Ruderman DL, Archie KA (1998) Translation-invariant orientation tuning in visual "complex" cells could derive from intradendritic computations. J Neurosci 18:4325-34 [PubMed]

Nenadic Z, Ghosh BK, Ulinski P (2003) Propagating waves in visual cortex: a large-scale model of turtle visual cortex. J Comput Neurosci 14:161-84 [Journal] [PubMed]

  • Turtle visual cortex model (Nenadic et al. 2003, Wang et al. 2005, Wang et al. 2006) [Model]

Pospischil M, Toledo-Rodriguez M, Monier C, Piwkowska Z, Bal T, Frégnac Y, Markram H, Destexhe A (2008) Minimal Hodgkin-Huxley type models for different classes of cortical and thalamic neurons. Biol Cybern 99:427-41 [Journal] [PubMed]

  • Hodgkin-Huxley models of different classes of cortical neurons (Pospischil et al. 2008) [Model]

Rapp M, Yarom Y, Segev I (1996) Modeling back propagating action potential in weakly excitable dendrites of neocortical pyramidal cells. Proc Natl Acad Sci U S A 93:11985-90 [PubMed]

Reuveni I, Friedman A, Amitai Y, Gutnick MJ (1993) Stepwise repolarization from Ca2+ plateaus in neocortical pyramidal cells: evidence for nonhomogeneous distribution of HVA Ca2+ channels in dendrites. J Neurosci 13:4609-21 [PubMed]

Rhodes PA, Llinás RR (2001) Apical tuft input efficacy in layer 5 pyramidal cells from rat visual cortex. J Physiol 536:167-87 [PubMed]

Roth A, Häusser M (2001) Compartmental models of rat cerebellar Purkinje cells based on simultaneous somatic and dendritic patch-clamp recordings. J Physiol 535:445-72 [PubMed]

Segev I, London M (2000) Untangling dendrites with quantitative models. Science 290:744-50 [PubMed]

Softky W (1994) Sub-millisecond coincidence detection in active dendritic trees. Neuroscience 58:13-41 [PubMed]

Spruston N, Jaffe DB, Williams SH, Johnston D (1993) Voltage- and space-clamp errors associated with the measurement of electrotonically remote synaptic events. J Neurophysiol 70:781-802 [Journal] [PubMed]

Spruston N, Johnston D (1992) Perforated patch-clamp analysis of the passive membrane properties of three classes of hippocampal neurons. J Neurophysiol 67:508-29 [Journal] [PubMed]

Stuart G, Spruston N (1998) Determinants of voltage attenuation in neocortical pyramidal neuron dendrites. J Neurosci 18:3501-10 [Journal] [PubMed]

  • Pyramidal Neuron Deep: attenuation in dendrites (Stuart, Spruston 1998) [Model]

Tabak J, Murphey CR, Moore LE (2000) Parameter estimation methods for single neuron models. J Comput Neurosci 9:215-36 [PubMed]

Thurbon D, Lüscher HR, Hofstetter T, Redman SJ (1998) Passive electrical properties of ventral horn neurons in rat spinal cord slices. J Neurophysiol 79:2485-502 [Journal] [PubMed]

Trevelyan AJ, Jack J (2002) Detailed passive cable models of layer 2/3 pyramidal cells in rat visual cortex at different temperatures. J Physiol 539:623-36 [Journal] [PubMed]

Tsay D, Yuste R (2002) Role of dendritic spines in action potential backpropagation: a numerical simulation study. J Neurophysiol 88:2834-45 [Journal] [PubMed]

Wang K, Riera J, Enjieu-Kadji H, Kawashima R (2013) The role of extracellular conductivity profiles in compartmental models for neurons: particulars for layer 5 pyramidal cells. Neural Comput 25:1807-52 [Journal] [PubMed]

  • Modeling conductivity profiles in the deep neocortical pyramidal neuron (Wang K et al. 2013) [Model]

Wang W, Luo S, Ghosh BK, Ulinski PS (2006) Generation of the receptive fields of subpial cells in turtle visual cortex. J Integr Neurosci 5:561-93 [Journal] [PubMed]

  • Turtle visual cortex model (Nenadic et al. 2003, Wang et al. 2005, Wang et al. 2006) [Model]

Weaver CM, Hof PR, Wearne SL, Lindquist WB (2004) Automated algorithms for multiscale morphometry of neuronal dendrites. Neural Comput 16:1353-83 [Journal] [PubMed]

Winslow JL, Jou SF, Wang S, Wojtowicz JM (1999) Signals in stochastically generated neurons. J Comput Neurosci 6:5-26 [PubMed]

(47 refs)