• | Constructed Tessellated Neuronal Geometries (CTNG) (McDougal et al. 2013) |
References and models cited by this paper | References and models that cite this paper | |||||||||||||
Ascoli GA, Donohue DE, Halavi M (2007) NeuroMorpho.Org: a central resource for neuronal morphologies. J Neurosci 27:9247-51 [Journal] [PubMed] Ascoli GA, Krichmar JL (2000) L-Neuron: a modeling tool for the efficient generation and parsimonious description of dendritic morphology. Neurocomputing 32:1003-1011 Barbier A, Galin E (2004) Fast distance computation between a point and cylinders, cones, line-swept spheres and cone-spheres, line-swept spheres And cone-spheres Journal Of Graphics Tools 9:11-20 Batista VH, Millman DL, Pion S, Singler J (2010) Parallel geometric algorithms for multi-core computers Computational Geometry 43:663-677 Breen DE (1991) Constructive cubes: CSG evaluation for display using discrete 3D scalar data sets Eurographics 91:127-142 Cuntz H, Forstner F, Borst A, Häusser M (2010) One rule to grow them all: a general theory of neuronal branching and its practical application. PLoS Comput Biol [Journal] [PubMed] Donohue DE, Ascoli GA (2011) Automated reconstruction of neuronal morphology: an overview. Brain Res Rev 67:94-102 [Journal] [PubMed] Dronne MA, Descombes S, Grenier G, Gilquin H (2009) Examples of the influence of the geometry on the propagation of progressive waves Mathematical And Computer Modelling 49(11):2138-2144 Franks KM, Bartol TM, Sejnowski TJ (2002) A Monte Carlo model reveals independent signaling at central glutamatergic synapses. Biophys J 83:2333-48 [Journal] [PubMed] Johansson G, Carr H (2006) Accelerating marching cubes with graphics hardware CASCON'06: Proceedings of the 2006 Conference of the Center for Advanced Studies on Collaborative Research 2006:39 Lasserre S, Hernando J, Hill S, Schmann F, Anasagasti_pde M, Jaoud GA, Markram H (2012) A neuron membrane mesh representation for visualization of electrophysiological simulations IEEE Transactions on Visualization and Computer Graphics 18(2):214-227 Lengyel E (2010) Transition cells for dynamic multiresolution marching cubes Journal of Graphics, GPU, and Game Tools 15(2):99-122 Lorensen HE (1987) Marching cubes: a high resolution 3D surface construction algorithm ACM Siggraph Computer Graphics 21:163-169 Moore PK, Flaherty JE (1992) Adaptive local overlapping grid methods for parabolic systems in two space dimensions Journal of Computational Physics 98(1):54-63 Nikolenko V, Poskanzer KE, Yuste R (2007) Two-photon photostimulation and imaging of neural circuits. Nat Methods 4:943-50 [Journal] [PubMed] Noguchi J, Matsuzaki M, Ellis-Davies GC, Kasai H (2005) Spine-neck geometry determines NMDA receptor-dependent Ca2+ signaling in dendrites. Neuron 46:609-22 [Journal] [PubMed] Poirazi P, Brannon T, Mel BW (2003) Arithmetic of subthreshold synaptic summation in a model CA1 pyramidal cell. Neuron 37:977-87 [PubMed]
Rodriguez A, Ehlenberger D, Kelliher K, Einstein M, Henderson SC, Morrison JH, Hof PR, Wearne SL (2003) Automated reconstruction of three-dimensional neuronal morphology from laser scanning microscopy images. Methods 30:94-105 [PubMed] van_Rossen S, Baranowski M (2011) Real-time constructive solid geometry Game Development Tools :79 | Grein S, Stepniewski M, Reiter S, Knodel MM, Queisser G (2014) 1D-3D hybrid modeling-from multi-compartment models to full resolution models in space and time. Front Neuroinform 8:68 [Journal] [PubMed] McDougal RA, Shepherd GM (2015) 3D-printer visualization of neuron models. Front Neuroinform 9:18 [Journal] [PubMed]
Mörschel K, Breit M, Queisser G (2017) Generating Neuron Geometries for Detailed Three-Dimensional Simulations Using AnaMorph. Neuroinformatics 15:247-269 [Journal] [PubMed]
Neymotin SA, Dura-Bernal S, Lakatos P, Sanger TD, Lytton WW (2016) Multitarget Multiscale Simulation for Pharmacological Treatment of Dystonia in Motor Cortex. Front Pharmacol 7:157 [Journal] [PubMed]
Neymotin SA, McDougal RA, Bulanova AS, Zeki M, Lakatos P, Terman D, Hines ML, Lytton WW (2016) Calcium regulation of HCN channels supports persistent activity in a multiscale model of neocortex. Neuroscience 316:344-66 [Journal] [PubMed]
Neymotin SA, McDougal RA, Sherif MA, Fall CP, Hines ML, Lytton WW (2015) Neuronal calcium wave propagation varies with changes in endoplasmic reticulum parameters: a computer model. Neural Comput 27:898-924 [Journal] [PubMed]
|