References and models cited by this paper

References and models that cite this paper

Crockford D (2006) The application/json media type for JavaScript object notation (JSON)

Davison AP, Brüderle D, Eppler J, Kremkow J, Muller E, Pecevski D, Perrinet L, Yger P (2008) PyNN: A Common Interface for Neuronal Network Simulators. Front Neuroinform 2:11 [Journal] [PubMed]

Davison AP,Mattioni M,Samarkanov D,Sumatra TB (2014) Sumatra: A toolkit for reproducible research Implementing reproducible, research, Stodden V:Leisch F, ed. pp.57

Gleeson P, Crook S, Cannon RC, Hines ML, Billings GO, Farinella M, Morse TM, Davison AP, Ray S, Bhalla US, Barnes SR, Dimitrova YD, Silver RA (2010) NeuroML: a language for describing data driven models of neurons and networks with a high degree of biological detail. PLoS Comput Biol 6:e1000815 [Journal] [PubMed]

Gleeson P, Steuber V, Silver RA (2007) neuroConstruct: a tool for modeling networks of neurons in 3D space. Neuron 54:219-35 [Journal] [PubMed]

Hines ML, Carnevale NT (2001) NEURON: a tool for neuroscientists. Neuroscientist 7:123-35 [Journal] [PubMed]

Hines ML, Morse TM, Carnevale NT (2007) Model structure analysis in NEURON : toward interoperability among neural simulators. Methods Mol Biol 401:91-102 [Journal] [PubMed]

Kohn MC,Hines ML,Kootsey JM,Feezor MD (1994) A block organized model builder Mathematical and Computer Modelling 19(6):75-97

Le Novère N, Bornstein B, Broicher A, Courtot M, Donizelli M, Dharuri H, Li L, Sauro H, Schilstra M, Shapiro B, Snoep JL, Hucka M (2006) BioModels Database: a free, centralized database of curated, published, quantitative kinetic models of biochemical and cellular systems. Nucleic Acids Res 34:D689-91 [Journal] [PubMed]

McDougal RA, Hines ML, Lytton WW (2013) Reaction-diffusion in the NEURON simulator. Front Neuroinform 7:28 [Journal] [PubMed]

Migliore M, Hoffman DA, Magee JC, Johnston D (1999) Role of an A-type K+ conductance in the back-propagation of action potentials in the dendrites of hippocampal pyramidal neurons. J Comput Neurosci 7:5-15 [Journal] [PubMed]

Migliore M, Morse TM, Davison AP, Marenco L, Shepherd GM, Hines ML (2003) ModelDB: making models publicly accessible to support computational neuroscience. Neuroinformatics 1:135-9 [Journal] [PubMed]

Morse TM, Carnevale NT, Mutalik PG, Migliore M, Shepherd GM (2010) Abnormal Excitability of Oblique Dendrites Implicated in Early Alzheimer's: A Computational Study. Front Neural Circuits [Journal] [PubMed]

Podlaski WF,Ranjan R,Seeholzer P,Markram H,Gerstner W,Vogels T (2013) Visualizing the similarity and pedigree of NEURON ion channel models available on ModelDB Program No. 678.31. Neuroscience 2013 Abstracts. San Diego: Society for Neuroscience. Online

Rivest R (1992) The MD5 message-digest algorithm. RFC1321, Internet engineering task force

Usui S (2003) Visiome: neuroinformatics research in vision project. Neural Netw 16:1293-300 [Journal] [PubMed]

Vervaeke K, Lorincz A, Gleeson P, Farinella M, Nusser Z, Silver RA (2010) Rapid desynchronization of an electrically coupled interneuron network with sparse excitatory synaptic input. Neuron 67:435-51 [Journal] [PubMed]

McDougal RA, Bulanova AS, Lytton WW (2016) Reproducibility in Computational Neuroscience Models and Simulations. IEEE Trans Biomed Eng 63:2021-35 [Journal] [PubMed]

Zhang Y, Smolen P, Alberini CM, Baxter DA, Byrne JH (2016) Computational model of a positive BDNF feedback loop in hippocampal neurons following inhibitory avoidance training. Learn Mem 23:714-722 [Journal] [PubMed]