Citation Relationships



McDougal RA, Morse TM, Carnevale T, Marenco L, Wang R, Migliore M, Miller PL, Shepherd GM, Hines ML (2017) Twenty years of ModelDB and beyond: building essential modeling tools for the future of neuroscience. J Comput Neurosci 42:1-10 [PubMed]

References and models cited by this paper

References and models that cite this paper

Ache JM, Polsky J, Alghailani S, Parekh R, Breads P, Peek MY, Bock DD, von Reyn CR, Card GM (2019) Neural Basis for Looming Size and Velocity Encoding in the Drosophila Giant Fiber Escape Pathway. Curr Biol 29:1073-1081.e4 [Journal] [PubMed]

Andreozzi E, Carannante I, D'Addio G, Cesarelli M, Balbi P (2019) Phenomenological models of NaV1.5. A side by side, procedural, hands-on comparison between Hodgkin-Huxley and kinetic formalisms Scientific Reports 9:17493 [Journal] [PubMed]

  • Phenomenological models of NaV1.5: Hodgkin-Huxley and kinetic formalisms (Andreozzi et al 2019) [Model]

Balbi P, Massobrio P, Hellgren Kotaleski J (2017) A single Markov-type kinetic model accounting for the macroscopic currents of all human voltage-gated sodium channel isoforms. PLoS Comput Biol 13:e1005737 [Journal] [PubMed]

  • A single kinetic model for all human voltage-gated sodium channels (Balbi et al, 2017) [Model]

Beining M, Mongiat LA, Schwarzacher SW, Cuntz H, Jedlicka P (2017) T2N as a new tool for robust electrophysiological modeling demonstrated for mature and adult-born dentate granule cells eLife [Journal]

  • Mature and young adult-born dentate granule cell models (T2N interface) (Beining et al. 2017) [Model]
  • GC model (Beining et al 2017) [Model]

Chrysanthidis N, Fiebig F, Lansner A (2019) Introducing double bouquet cells into a modular cortical associative memory model Journal of Computational Neuroscience [Journal]

  • An electrophysiological model of GABAergic double bouquet cells (Chrysanthidis et al. 2019) [Model]

Crone JC, Vindiola MM, Yu AB, Boothe DL, Beeman D, Oie KS, Franaszczuk PJ (2019) Enabling Large-Scale Simulations With the GENESIS Neuronal Simulator Frontiers in Neuroinformatics 13:69 [Journal]

  • ACnet23 primary auditory cortex model (Beeman et al 2019) [Model]
  • Large scale neocortical model for PGENESIS (Crone et al 2019) [Model]

Danner SM, Shevtsova NA, Frigon A, Rybak IA (2017) Computational modeling of spinal circuits controlling limb coordination and gaits in quadrupeds. Elife [Journal] [PubMed]

  • Spinal circuits controlling limb coordination and gaits in quadrupeds (Danner et al 2017) [Model]

Denizot A, Arizono M, Nägerl UV, Soula H, Berry H (2019) Simulation of calcium signaling in fine astrocytic processes: Effect of spatial properties on spontaneous activity. PLoS Comput Biol 15:e1006795 [Journal] [PubMed]

  • Simulation of calcium signaling in fine astrocytic processes (Denizot et al 2019) [Model]

Diekman CO, Thomas PJ, Wilson CG (2017) Eupnea, tachypnea, and autoresuscitation in a closed-loop respiratory control model. J Neurophysiol 118:2194-2215 [Journal] [PubMed]

  • Respiratory control model with brainstem CPG and sensory feedback (Diekman, Thomas, and Wilson 2017) [Model]

Ibañez S, Luebke JI, Chang W, Draguljic D, Weaver CM (2019) Network Models Predict That Pyramidal Neuron Hyperexcitability and Synapse Loss in the dlPFC Lead to Age-Related Spatial Working Memory Impairment in Rhesus Monkeys. Front Comput Neurosci 13:89 [Journal] [PubMed]

  • Bump Attractor Models: Delayed Response & Recognition Span - spatial condition (Ibanez et al 2019) [Model]

Khatri SN, Wu WC, Yang Y, Pugh JR (2019) Mechanisms of GABAB receptor enhancement of extrasynaptic GABAA receptor currents in cerebellar granule cells. Sci Rep 9:16683 [Journal] [PubMed]

Liu Y, Milton J, Campbell SA (2019) Outgrowing seizures in Childhood Absence Epilepsy: time delays and bistability. J Comput Neurosci [Journal] [PubMed]

  • Thalamocortical loop with delay for investigation of absence epilepsy (Liu et al 2019) [Model]

Lombardi A, Jedlicka P, Luhmann HJ, Kilb W (2019) Interactions Between Membrane Resistance, GABA-A Receptor Properties, Bicarbonate Dynamics and Cl-Transport Shape Activity-Dependent Changes of Intracellular Cl- Concentration Int J of Mol Sci [Journal] [PubMed]

  • Factors contribution to GDP-induced [Cl-]i transients (Lombardi et al 2019) [Model]

Malik-Sheriff RS, Glont M, Nguyen TVN, Tiwari K, Roberts MG, Xavier A, Vu MT, Men J, Maire M, Kananathan S, Fairbanks EL, Meyer JP, Arankalle C, Varusai TM, Knight-Schrijver V, Li L, Dueñas-Roca C, Dass G, Keating SM, Park YM, Buso N, Rodriguez N, Hucka M, Hermjakob H (2019) BioModels-15 years of sharing computational models in life science. Nucleic Acids Res [Journal] [PubMed]

Manis PB, Campagnola L (2018) A biophysical modelling platform of the cochlear nucleus and other auditory circuits: From channels to networks. Hear Res 360:76-91 [Journal] [PubMed]

  • Modelling platform of the cochlear nucleus and other auditory circuits (Manis & Compagnola 2018) [Model]

McDougal RA, Dalal I, Morse TM, Shepherd GM (2019) Automated Metadata Suggestion During Repository Submission. Neuroinformatics 17(3):361-371 [Journal] [PubMed]

  • Automated metadata suggester (McDougal et al 2018) [Model]

Muddapu VR, Mandali A, Chakravarthy VS, Ramaswamy S (2019) A Computational Model of Loss of Dopaminergic Cells in Parkinson's Disease Due to Glutamate-Induced Excitotoxicity. Front Neural Circuits 13:11 [Journal] [PubMed]

  • Excitotoxic loss of dopaminergic cells in PD (Muddapu et al 2019) [Model]

Sherfey JS, Soplata AE, Ardid S, Roberts EA, Stanley DA, Pittman-Polletta BR, Kopell NJ (2018) DynaSim: A MATLAB Toolbox for Neural Modeling and Simulation. Front Neuroinform 12:10 [Journal] [PubMed]

  • DynaSim: a MATLAB toolbox for neural modeling and simulation (Sherfey et al 2018) [Model]

Strüber M, Sauer JF, Jonas P, Bartos M (2017) Distance-dependent inhibition facilitates focality of gamma oscillations in the dentate gyrus. Nat Commun 8:758 [Journal] [PubMed]

  • Distance-dependent inhibition in the hippocampus (Strüber et al. 2017) [Model]

Viertel R, Borisyuk A (2019) A Computational model of the mammalian external tufted cell. J Theor Biol 462:109-121 [Journal] [PubMed]

  • External Tufted Cell Model (Ryan Viertel, Alla Borisyuk 2019) [Model]

(20 refs)