Citation Relationships



Van Geit W, Gevaert M, Chindemi G, Rössert C, Courcol JD, Muller EB, Schürmann F, Segev I, Markram H (2016) BluePyOpt: Leveraging Open Source Software and Cloud Infrastructure to Optimise Model Parameters in Neuroscience. Front Neuroinform 10:17 [PubMed]

References and models cited by this paper

References and models that cite this paper

Beining M, Mongiat LA, Schwarzacher SW, Cuntz H, Jedlicka P (2017) T2N as a new tool for robust electrophysiological modeling demonstrated for mature and adult-born dentate granule cells eLife [Journal]

  • Mature and young adult-born dentate granule cell models (T2N interface) (Beining et al. 2017) [Model]
  • GC model (Beining et al 2017) [Model]

Iavarone E, Yi J, Shi Y, Zandt BJ, O'Reilly C, Van Geit W, Rössert C, Markram H, Hill SL (2019) Experimentally-constrained biophysical models of tonic and burst firing modes in thalamocortical neurons. PLoS Comput Biol 15:e1006753 [Journal] [PubMed]

  • Thalamocortical relay neuron models constrained by experiment and optimization (Iavarone et al 2019) [Model]

J?drzejewski-Szmek Z, Abrahao KP, J?drzejewska-Szmek J, Lovinger DM, Blackwell KT (2018) Parameter Optimization Using Covariance Matrix Adaptation-Evolutionary Strategy (CMA-ES), an Approach to Investigate Differences in Channel Properties Between Neuron Subtypes. Front Neuroinform 12:47 [Journal] [PubMed]

  • Parameter optimization using CMA-ES (Jedrzejewski-Szmek et al 2018) [Model]

Kalmbach BE, Buchin A, Long B, Close J, Nandi A, Miller JA, Bakken TE, Hodge RD, Chong P, de Frates R, Dai K, Maltzer Z, Nicovich PR, Keene CD, Silbergeld DL, Gwinn RP, Cobbs C, Ko AL, Ojemann JG, Koch C, Anastassiou CA, Lein ES, Ting JT (2018) h-Channels Contribute to Divergent Intrinsic Membrane Properties of Supragranular Pyramidal Neurons in Human versus Mouse Cerebral Cortex. Neuron 100:1194-1208.e5 [Journal] [PubMed]

Mäki-Marttunen T, Halnes G, Devor A, Metzner C, Dale AM, Andreassen OA, Einevoll GT (2018) A stepwise neuron model fitting procedure designed for recordings with high spatial resolution: Application to layer 5 pyramidal cells. J Neurosci Methods 293:264-283 [Journal] [PubMed]

  • Layer V pyramidal cell model with reduced morphology (Mäki-Marttunen et al 2018) [Model]

Neymotin SA, Suter BA, Dura-Bernal S, Shepherd GM, Migliore M, Lytton WW (2017) Optimizing computer models of corticospinal neurons to replicate in vitro dynamics. J Neurophysiol 117:148-162 [Journal] [PubMed]

  • Computer models of corticospinal neurons replicate in vitro dynamics (Neymotin et al. 2017) [Model]

Rumbell T, Kozloski J (2019) Dimensions of control for subthreshold oscillations and spontaneous firing in dopamine neurons PLOS Computational Biology 15:1-34 [Journal]

  • Control of oscillations and spontaneous firing in dopamine neurons (Rumbell & Kozloski 2019) [Model]

(7 refs)