Citation Relationships



Antunes G, Simoes-de-Souza FM (2018) AMPA receptor trafficking and its role in heterosynaptic plasticity. Sci Rep 8:10349 [PubMed]

   AMPA receptor trafficking and its role in heterosynaptic plasticity (Antunes et al 2018)

References and models cited by this paper

References and models that cite this paper

Abbott LF, Nelson SB (2000) Synaptic plasticity: taming the beast. Nat Neurosci 3 Suppl:1178-83 [Journal] [PubMed]

Adesnik H, Nicoll RA, England PM (2005) Photoinactivation of native AMPA receptors reveals their real-time trafficking. Neuron 48:977-85 [Journal] [PubMed]

Anggono V, Huganir RL (2012) Regulation of AMPA receptor trafficking and synaptic plasticity. Curr Opin Neurobiol 22:461-9 [Journal] [PubMed]

Antunes G, Roque AC, Simoes de Souza FM (2016) Modelling intracellular competition for calcium: kinetic and thermodynamic control of different molecular modes of signal decoding. Sci Rep 6:23730 [Journal] [PubMed]

Antunes G, Roque AC, Simoes-de-Souza FM (2016) Stochastic Induction of Long-Term Potentiation and Long-Term Depression. Sci Rep 6:30899 [Journal] [PubMed]

Antunes G, Roque AC, Simoes-de-Souza FM (2018) Molecular mechanisms of detection and discrimination of dynamic signals. Sci Rep 8:2480 [Journal] [PubMed]

Bats C, Groc L, Choquet D (2007) The interaction between Stargazin and PSD-95 regulates AMPA receptor surface trafficking. Neuron 53:719-34 [Journal] [PubMed]

Borgdorff AJ, Choquet D (2002) Regulation of AMPA receptor lateral movements. Nature 417:649-53 [Journal] [PubMed]

Bourne J, Harris KM (2007) Do thin spines learn to be mushroom spines that remember? Curr Opin Neurobiol 17:381-6 [Journal] [PubMed]

Cheng D, Hoogenraad CC, Rush J, Ramm E, Schlager MA, Duong DM, Xu P, Wijayawardana SR, Hanfelt J, Nakagawa T, Sheng M, Peng J (2006) Relative and absolute quantification of postsynaptic density proteome isolated from rat forebrain and cerebellum. Mol Cell Proteomics 5:1158-70 [Journal] [PubMed]

Coultrap SJ, Freund RK, O'Leary H, Sanderson JL, Roche KW, Dell'Acqua ML, Bayer KU (2014) Autonomous CaMKII mediates both LTP and LTD using a mechanism for differential substrate site selection. Cell Rep 6:431-7 [Journal] [PubMed]

Czöndör K, Mondin M, Garcia M, Heine M, Frischknecht R, Choquet D, Sibarita JB, Thoumine OR (2012) Unified quantitative model of AMPA receptor trafficking at synapses. Proc Natl Acad Sci U S A 109:3522-7 [Journal] [PubMed]

Diering GH, Heo S, Hussain NK, Liu B, Huganir RL (2016) Extensive phosphorylation of AMPA receptors in neurons. Proc Natl Acad Sci U S A 113:E4920-7 [Journal] [PubMed]

Earnshaw BA, Bressloff PC (2006) Biophysical model of AMPA receptor trafficking and its regulation during long-term potentiation/long-term depression. J Neurosci 26:12362-73 [Journal] [PubMed]

Harris KM, Stevens JK (1989) Dendritic spines of CA 1 pyramidal cells in the rat hippocampus: serial electron microscopy with reference to their biophysical characteristics. J Neurosci 9:2982-97 [PubMed]

Harvey CD, Svoboda K (2007) Locally dynamic synaptic learning rules in pyramidal neuron dendrites. Nature 450:1195-200 [Journal] [PubMed]

Harvey CD, Yasuda R, Zhong H, Svoboda K (2008) The spread of Ras activity triggered by activation of a single dendritic spine. Science 321:136-40 [Journal] [PubMed]

Kastellakis G, Cai DJ, Mednick SC, Silva AJ, Poirazi P (2015) Synaptic clustering within dendrites: an emerging theory of memory formation. Prog Neurobiol 126:19-35 [Journal] [PubMed]

Kerr RA, Bartol TM, Kaminsky B, Dittrich M, Chang JC, Baden SB, Sejnowski TJ, Stiles JR (2008) FAST MONTE CARLO SIMULATION METHODS FOR BIOLOGICAL REACTION-DIFFUSION SYSTEMS IN SOLUTION AND ON SURFACES. SIAM J Sci Comput 30:3126 [Journal] [PubMed]

Kotaleski JH, Blackwell KT (2010) Modelling the molecular mechanisms of synaptic plasticity using systems biology approaches. Nat Rev Neurosci 11:239-51 [Journal] [PubMed]

Kusters R, Kapitein LC, Hoogenraad CC, Storm C (2013) Shape-induced asymmetric diffusion in dendritic spines allows efficient synaptic AMPA receptor trapping. Biophys J 105:2743-50 [Journal] [PubMed]

Legenstein R, Maass W (2011) Branch-specific plasticity enables self-organization of nonlinear computation in single neurons. J Neurosci 31:10787-802 [Journal] [PubMed]

Lisman JE, Zhabotinsky AM (2001) A model of synaptic memory: a CaMKII/PP1 switch that potentiates transmission by organizing an AMPA receptor anchoring assembly. Neuron 31:191-201 [PubMed]

Lüscher C, Malenka RC (2012) NMDA receptor-dependent long-term potentiation and long-term depression (LTP/LTD). Cold Spring Harb Perspect Biol [Journal] [PubMed]

Makino H, Malinow R (2009) AMPA receptor incorporation into synapses during LTP: the role of lateral movement and exocytosis. Neuron 64:381-90 [Journal] [PubMed]

Makino H, Malinow R (2011) Compartmentalized versus global synaptic plasticity on dendrites controlled by experience. Neuron 72:1001-11 [Journal] [PubMed]

Matsuzaki M, Honkura N, Ellis-Davies GC, Kasai H (2004) Structural basis of long-term potentiation in single dendritic spines. Nature 429:761-6 [Journal] [PubMed]

Nishiyama J, Yasuda R (2015) Biochemical Computation for Spine Structural Plasticity. Neuron 87:63-75 [Journal] [PubMed]

Oh WC, Parajuli LK, Zito K (2015) Heterosynaptic structural plasticity on local dendritic segments of hippocampal CA1 neurons. Cell Rep 10:162-9 [Journal] [PubMed]

Opazo P, Labrecque S, Tigaret CM, Frouin A, Wiseman PW, De Koninck P, Choquet D (2010) CaMKII triggers the diffusional trapping of surface AMPARs through phosphorylation of stargazin. Neuron 67:239-52 [Journal] [PubMed]

Park J, Chávez AE, Mineur YS, Morimoto-Tomita M, Lutzu S, Kim KS, Picciotto MR, Castillo PE, Tomita S (2016) CaMKII Phosphorylation of TARP?-8 Is a Mediator of LTP and Learning and Memory. Neuron 92:75-83 [Journal] [PubMed]

Passafaro M, Piëch V, Sheng M (2001) Subunit-specific temporal and spatial patterns of AMPA receptor exocytosis in hippocampal neurons. Nat Neurosci 4:917-26 [Journal] [PubMed]

Patterson MA, Szatmari EM, Yasuda R (2010) AMPA receptors are exocytosed in stimulated spines and adjacent dendrites in a Ras-ERK-dependent manner during long-term potentiation. Proc Natl Acad Sci U S A 107:15951-6 [Journal] [PubMed]

Poirazi P, Mel BW (2001) Impact of active dendrites and structural plasticity on the memory capacity of neural tissue. Neuron 29:779-96 [PubMed]

Rabinowitch I, Segev I (2008) Two opposing plasticity mechanisms pulling a single synapse. Trends Neurosci 31:377-83 [Journal] [PubMed]

   Homeostatic synaptic plasticity (Rabinowitch and Segev 2006a,b) [Model]

Raghavachari S, Lisman JE (2004) Properties of quantal transmission at CA1 synapses. J Neurophysiol 92:2456-67 [Journal] [PubMed]

Santamaria F, Gonzalez J, Augustine GJ, Raghavachari S (2010) Quantifying the effects of elastic collisions and non-covalent binding on glutamate receptor trafficking in the post-synaptic density. PLoS Comput Biol 6:e1000780 [Journal] [PubMed]

Scanziani M, Nicoll RA, Malenka RC (1996) Heterosynaptic long-term depression in the hippocampus. J Physiol Paris 90:165-6 [Journal] [PubMed]

Seeliger C, Le Novère N (2015) Enabling surface dependent diffusion in spatial simulations using Smoldyn. BMC Res Notes 8:752 [Journal] [PubMed]

Smolen P, Baxter DA, Byrne JH (2006) A model of the roles of essential kinases in the induction and expression of late long-term potentiation. Biophys J 90:2760-75 [Journal] [PubMed]

   Roles of essential kinases in induction of late hippocampal LTP (Smolen et al., 2006) [Model]

Smolen P, Baxter DA, Byrne JH (2012) Molecular constraints on synaptic tagging and maintenance of long-term potentiation: a predictive model. PLoS Comput Biol 8:e1002620 [Journal] [PubMed]

Sossin WS (2018) Memory Synapses Are Defined by Distinct Molecular Complexes: A Proposal. Front Synaptic Neurosci 10:5 [Journal] [PubMed]

Stiles JR, Bartol TM (2001) Monte Carlo methods for simulating realistic synaptic microphysiology using MCell Computational Neuroscience: Realistic Modelling for Experimentalists, DeSchutter E, ed. pp.87

Stiles JR, Van Helden D, Bartol TM, Salpeter EE, Salpeter MM (1996) Miniature endplate current rise times less than 100 microseconds from improved dual recordings can be modeled with passive acetylcholine diffusion from a synaptic vesicle. Proc Natl Acad Sci U S A 93:5747-52 [PubMed]

Tang S, Yasuda R (2017) Imaging ERK and PKA Activation in Single Dendritic Spines during Structural Plasticity. Neuron 93:1315-1324.e3 [Journal] [PubMed]

Tao-Cheng JH, Crocker VT, Winters CA, Azzam R, Chludzinski J, Reese TS (2011) Trafficking of AMPA receptors at plasma membranes of hippocampal neurons. J Neurosci 31:4834-43 [Journal] [PubMed]

Turrigiano GG, Leslie KR, Desai NS, Rutherford LC, Nelson SB (1998) Activity-dependent scaling of quantal amplitude in neocortical neurons. Nature 391:892-6 [Journal] [PubMed]

Volgushev M, Chen JY, Ilin V, Goz R, Chistiakova M, Bazhenov M (2016) Partial Breakdown of Input Specificity of STDP at Individual Synapses Promotes New Learning. J Neurosci 36:8842-55 [Journal] [PubMed]

Zenke F, Agnes EJ, Gerstner W (2015) Diverse synaptic plasticity mechanisms orchestrated to form and retrieve memories in spiking neural networks. Nat Commun 6:6922 [Journal] [PubMed]

Zenke F, Gerstner W (2017) Hebbian plasticity requires compensatory processes on multiple timescales. Philos Trans R Soc Lond B Biol Sci [Journal] [PubMed]

(50 refs)