Citation Relationships



Migliore M, Morse TM, Davison AP, Marenco L, Shepherd GM, Hines ML (2003) ModelDB: making models publicly accessible to support computational neuroscience. Neuroinformatics 1:135-9 [PubMed]

References and models cited by this paper

References and models that cite this paper

Cassarà AM, Hagberg GE, Bianciardi M, Migliore M, Maraviglia B (2008) Realistic simulations of neuronal activity: a contribution to the debate on direct detection of neuronal currents by MRI. Neuroimage 39:87-106 [Journal] [PubMed]

  • CA1 pyramidal neuron: calculation of MRI signals (Cassara et al. 2008) [Model]

Cassarà AM, Maraviglia B (2008) Microscopic investigation of the resonant mechanism for the implementation of nc-MRI at ultra-low field MRI. Neuroimage 41:1228-41 [Journal] [PubMed]

  • CA1 pyramidal neuron: calculation of MRI signals (Cassara et al. 2008) [Model]

Cattani A, Solinas S, Canuto C (2016) A Hybrid Model for the Computationally-Efficient Simulation of the Cerebellar Granular Layer. Front Comput Neurosci 10:30 [Journal] [PubMed]

Cavarretta F, Carnevale NT, Tegolo D, Migliore M (2014) Effects of low frequency electric fields on synaptic integration in hippocampal CA1 pyramidal neurons: implications for power line emissions. Front Cell Neurosci 8:310 [Journal] [PubMed]

  • CA1 pyramidal neurons: effect of external electric field from power lines (Cavarretta et al. 2014) [Model]

De Schutter E (2014) The dangers of plug-and-play simulation using shared models. Neuroinformatics 12:227-8 [Journal] [PubMed]

Donohue DE, Ascoli GA (2008) A comparative computer simulation of dendritic morphology. PLoS Comput Biol 4:e1000089 [Journal] [PubMed]

  • A comparative computer simulation of dendritic morphology (Donohue and Ascoli 2008) [Model]

Ferrante M, Blackwell KT, Migliore M, Ascoli GA (2008) Computational models of neuronal biophysics and the characterization of potential neuropharmacological targets. Curr Med Chem 15:2456-71 [PubMed]

  • Computational neuropharmacology of CA1 pyramidal neuron (Ferrante et al. 2008) [Model]

Grein S, Stepniewski M, Reiter S, Knodel MM, Queisser G (2014) 1D-3D hybrid modeling-from multi-compartment models to full resolution models in space and time. Front Neuroinform 8:68 [Journal] [PubMed]

Gunn BG, Cox CD, Chen Y, Frotscher M, Gall CM, Baram TZ, Lynch G (2017) The Endogenous Stress Hormone CRH Modulates Excitatory Transmission and Network Physiology in Hippocampus. Cereb Cortex 27:4182-4198 [Journal] [PubMed]

  • CRH modulates excitatory transmission and network physiology in hippocampus (Gunn et al. 2017) [Model]

Hines ML, Morse T, Migliore M, Carnevale NT, Shepherd GM (2004) ModelDB: A Database to Support Computational Neuroscience. J Comput Neurosci 17:7-11 [Journal] [PubMed]

Le Franc Y, Le Masson G (2010) Multiple firing patterns in deep dorsal horn neurons of the spinal cord: computational analysis of mechanisms and functional implications. J Neurophysiol 104:1978-96 [Journal] [PubMed]

Manis PB, Campagnola L (2018) A biophysical modelling platform of the cochlear nucleus and other auditory circuits: From channels to networks. Hear Res 360:76-91 [Journal] [PubMed]

  • Modelling platform of the cochlear nucleus and other auditory circuits (Manis & Compagnola 2018) [Model]

Manninen T, Havela R, Linne ML (2017) Reproducibility and comparability of computational models for astrocyte calcium excitability Front. Neuroinform. [Journal]

  • Ca2+ oscillations in single astrocytes (Lavrentovich and Hemkin 2008) (python) (Manninen et al 2017) [Model]
  • Glutamate-evoked Ca2+ oscillations in single astrocytes (Modified from Dupont et al. 2011) [Model]
  • Glutamate-evoked Ca2+ oscillations in single astrocytes (De Pitta et al. 2009) (Manninen et al 2017) [Model]
  • Reproducibility and comparability of models for astrocyte Ca2+ excitability (Manninen et al 2017) [Model]
  • Spontaneous calcium oscillations in single astrocytes (Riera et al. 2011) (Manninen et al 2017) [Model]

Manninen T, Hituri K, Kotaleski JH, Blackwell KT, Linne ML (2010) Postsynaptic signal transduction models for long-term potentiation and depression. Front Comput Neurosci 4:152 [Journal] [PubMed]

McDougal RA, Bulanova AS, Lytton WW (2016) Reproducibility in Computational Neuroscience Models and Simulations. IEEE Trans Biomed Eng 63:2021-35 [Journal] [PubMed]

McDougal RA, Morse TM, Hines ML, Shepherd GM (2015) ModelView for ModelDB: Online Presentation of Model Structure. Neuroinformatics 13:459-70 [Journal] [PubMed]

  • ModelView: online structural analysis of computational models (McDougal et al. 2015) [Model]

Miceli F, Soldovieri MV, Ambrosino P, Barrese V, Migliore M, Cilio MR, Taglialatela M (2013) Genotype-phenotype correlations in neonatal epilepsies caused by mutations in the voltage sensor of K(v)7.2 potassium channel subunits. Proc Natl Acad Sci U S A 110:4386-91 [Journal] [PubMed]

  • CA1 pyramidal neuron: effects of R213Q and R312W Kv7.2 mutations (Miceli et al. 2013) [Model]

Miceli F, Soldovieri MV, Lugli L, Bellini G, Ambrosino P, Migliore M, del Giudice EM, Ferrari F, Pascotto A, Taglialatela M (2009) Neutralization of a unique, negatively-charged residue in the voltage sensor of K V 7.2 subunits in a sporadic case of benign familial neonatal seizures. Neurobiol Dis 34:501-10 [Journal] [PubMed]

  • CA1 pyramidal neurons: effects of a Kv7.2 mutation (Miceli et al. 2009) [Model]

Migliore M, Ferrante M, Ascoli GA (2005) Signal propagation in oblique dendrites of CA1 pyramidal cells. J Neurophysiol 94:4145-55 [Journal] [PubMed]

  • CA1 pyramidal neuron: signal propagation in oblique dendrites (Migliore et al 2005) [Model]

Morse TM (2008) ModelDB in computational neuroscience education - a research tool as interactive educational media. Brains Minds Media, Lorenz S, Egelhaaf M, ed. pp.bmm1409 [Journal] [PubMed]

Neymotin SA, Suter BA, Dura-Bernal S, Shepherd GM, Migliore M, Lytton WW (2017) Optimizing computer models of corticospinal neurons to replicate in vitro dynamics. J Neurophysiol 117:148-162 [Journal] [PubMed]

  • Computer models of corticospinal neurons replicate in vitro dynamics (Neymotin et al. 2017) [Model]

Parasuram H, Nair B, D'Angelo E, Hines M, Naldi G, Diwakar S (2016) Computational Modeling of Single Neuron Extracellular Electric Potentials and Network Local Field Potentials using LFPsim. Front Comput Neurosci 10:65 [Journal] [PubMed]

  • Modeling single neuron LFPs and extracellular potentials with LFPsim (Parasuram et al. 2016) [Model]

Schneider CJ, Cuntz H, Soltesz I (2014) Linking macroscopic with microscopic neuroanatomy using synthetic neuronal populations. PLoS Comput Biol 10:e1003921 [Journal] [PubMed]

  • Generation of granule cell dendritic morphology (Schneider et al. 2014) [Model]

Shah MM, Migliore M, Brown DA (2011) Differential effects of Kv7 (M-) channels on synaptic integration in distinct subcellular compartments of rat hippocampal pyramidal neurons. J Physiol 589:6029-38 [Journal] [PubMed]

  • CA1 pyramidal neurons: effects of Kv7 (M-) channels on synaptic integration (Shah et al. 2011) [Model]

Stanley DA, Talathi SS, Parekh MB, Cordiner DJ, Zhou J, Mareci TH, Ditto WL, Carney PR (2013) Phase shift in the 24-hour rhythm of hippocampal EEG spiking activity in a rat model of temporal lobe epilepsy. J Neurophysiol 110:1070-86 [Journal] [PubMed]

  • Hippocampal CA3 network and circadian regulation (Stanley et al. 2013) [Model]

Varela JA, Wang J, Christianson JP, Maier SF, Cooper DC (2012) Control over Stress, But Not Stress Per Se Increases Prefrontal Cortical Pyramidal Neuron Excitability The Journal of Neuroscience 32(37):12848-12853 [Journal] [PubMed]

(26 refs)