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Major G, Larkman AU, Jonas P, Sakmann B, Jack JJ (1994) Detailed passive cable models of whole-cell recorded CA3 pyramidal neurons in rat hippocampal slices. J Neurosci 14:4613-38 [PubMed]

References and models cited by this paper

References and models that cite this paper

Baginskas A, Raastad M (2002) An estimator for the electrotonic size of neurons independent of charge equalization time constants. J Comput Neurosci 12:27-38 [PubMed]

Baker JL, Perez-Rosello T, Migliore M, Barrionuevo G, Ascoli GA (2011) A computer model of unitary responses from associational/commissural and perforant path synapses in hippocampal CA3 pyramidal cells. J Comput Neurosci 31:137-58 [Journal] [PubMed]

  • A model of unitary responses from A/C and PP synapses in CA3 pyramidal cells (Baker et al. 2010) [Model]

Bartos M, Vida I, Frotscher M, Geiger JR, Jonas P (2001) Rapid signaling at inhibitory synapses in a dentate gyrus interneuron network. J Neurosci 21:2687-98 [PubMed]

  • Dentate Basket Cell: spatial summation of inhibitory synaptic inputs (Bartos et al 2001) [Model]

Benke TA, Lüthi A, Palmer MJ, Wikström MA, Anderson WW, Isaac JT, Collingridge GL (2001) Mathematical modelling of non-stationary fluctuation analysis for studying channel properties of synaptic AMPA receptors. J Physiol 537:407-20 [PubMed]

Brown SA, Moraru II, Schaff JC, Loew LM (2011) Virtual NEURON: a strategy for merged biochemical and electrophysiological modeling. J Comput Neurosci 31:385-400 [Journal] [PubMed]

  • A simplified cerebellar Purkinje neuron (the PPR model) (Brown et al. 2011) [Model]

Bui TV, Cushing S, Dewey D, Fyffe RE, Rose PK (2003) Comparison of the morphological and electrotonic properties of Renshaw cells, Ia inhibitory interneurons, and motoneurons in the cat. J Neurophysiol 90:2900-18 [Journal] [PubMed]

Cai Y, Baxter DA, Crow T (2003) Computational study of enhanced excitability in Hermissenda: membrane conductances modulated by 5-HT. J Comput Neurosci 15:105-21 [PubMed]

  • Enhanced Excitability in Hermissenda: modulation by 5-HT (Cai et al 2003) [Model]

Chitwood RA, Hubbard A, Jaffe DB (1999) Passive electrotonic properties of rat hippocampal CA3 interneurones. J Physiol 515 ( Pt 3):743-56 [PubMed]

De Schutter E (1999) Using realistic models to study synaptic integration in cerebellar Purkinje cells. Rev Neurosci 10:233-45 [PubMed]

Destexhe A, Contreras D, Steriade M, Sejnowski TJ, Huguenard JR (1996) In vivo, in vitro, and computational analysis of dendritic calcium currents in thalamic reticular neurons. J Neurosci 16:169-85 [Journal] [PubMed]

  • Thalamic reticular neurons: the role of Ca currents (Destexhe et al 1996) [Model]

Emri Z, Antal K, Crunelli V (2003) The impact of corticothalamic feedback on the output dynamics of a thalamocortical neurone model: the role of synapse location and metabotropic glutamate receptors. Neuroscience 117:229-39 [PubMed]

Eyal G, Verhoog MB, Testa-Silva G, Deitcher Y, Lodder JC, Benavides-Piccione R, Morales J, DeFelipe J, de Kock CP, Mansvelder HD, Segev I (2016) Unique membrane properties and enhanced signal processing in human neocortical neurons. Elife [Journal] [PubMed]

  • Human L2/3 pyramidal cells with low Cm values (Eyal et al. 2016) [Model]

Geiger JR, Lübke J, Roth A, Frotscher M, Jonas P (1997) Submillisecond AMPA receptor-mediated signaling at a principal neuron-interneuron synapse. Neuron 18:1009-23 [PubMed]

  • Fast AMPA receptor signaling (Geiger et al 1997) [Model]

Gillies A, Willshaw D (2006) Membrane channel interactions underlying rat subthalamic projection neuron rhythmic and bursting activity. J Neurophysiol 95:2352-65 [Journal] [PubMed]

  • Rat subthalamic projection neuron (Gillies and Willshaw 2006) [Model]

Gold C, Henze DA, Koch C, Buzsáki G (2006) On the origin of the extracellular action potential waveform: A modeling study. J Neurophysiol 95:3113-28 [Journal] [PubMed]

  • Extracellular Action Potential Simulations (Gold et al 2007) [Model]

Golding NL, Mickus TJ, Katz Y, Kath WL, Spruston N (2005) Factors mediating powerful voltage attenuation along CA1 pyramidal neuron dendrites. J Physiol 568:69-82 [Journal] [PubMed]

  • Voltage attenuation in CA1 pyramidal neuron dendrites (Golding et al 2005) [Model]

Gouwens NW, Wilson RI (2009) Signal propagation in Drosophila central neurons. J Neurosci 29:6239-49 [Journal] [PubMed]

  • Drosophila projection neuron electrotonic structure (Gouwens and Wilson 2009) [Model]

Gütig R, Sompolinsky H (2009) Time-warp-invariant neuronal processing. PLoS Biol 7:e1000141 [Journal] [PubMed]

  • Time-warp-invariant neuronal processing (Gutig & Sompolinsky 2009) [Model]

Hagen E, Fossum JC, Pettersen KH, Alonso JM, Swadlow HA, Einevoll GT (2017) Focal Local Field Potential Signature of the Single-Axon Monosynaptic Thalamocortical Connection. J Neurosci 37:5123-5143 [Journal] [PubMed]

  • LFP signature of monosynaptic thalamocortical connection (Hagen et al 2017) [Model]

Hartline DK, Castelfranco AM (2003) Simulations of Voltage Clamping Poorly Space-Clamped Voltage-Dependent Conductances in a Uniform Cylindrical Neurite Journal of Computational Neuroscience 14:253-269 [Journal] [PubMed]

Häusser M, Clark BA (1997) Tonic synaptic inhibition modulates neuronal output pattern and spatiotemporal synaptic integration. Neuron 19:665-78 [PubMed]

Häusser M, Roth A (1997) Estimating the time course of the excitatory synaptic conductance in neocortical pyramidal cells using a novel voltage jump method. J Neurosci 17:7606-25 [PubMed]

Hemond P, Epstein D, Boley A, Migliore M, Ascoli GA, Jaffe DB (2008) Distinct classes of pyramidal cells exhibit mutually exclusive firing patterns in hippocampal area CA3b. Hippocampus 18:411-24 [Journal] [PubMed]

  • CA3 pyramidal neuron: firing properties (Hemond et al. 2008) [Model]

Hemond P, Migliore M, Ascoli GA, Jaffe DB (2009) The membrane response of hippocampal CA3b pyramidal neurons near rest: Heterogeneity of passive properties and the contribution of hyperpolarization-activated currents. Neuroscience 160:359-70 [Journal] [PubMed]

  • Ca3 pyramidal neuron: membrane response near rest (Hemond et al. 2009) [Model]

Henze DA, Cameron WE, Barrionuevo G (1996) Dendritic morphology and its effects on the amplitude and rise-time of synaptic signals in hippocampal CA3 pyramidal cells. J Comp Neurol 369:331-44 [Journal] [PubMed]

Holmes WR, Ambros-Ingerson J, Grover LM (2006) Fitting experimental data to models that use morphological data from public databases. J Comput Neurosci 20:349-65 [Journal] [PubMed]

Huang S, Hong S, De Schutter E (2015) Non-linear leak currents affect mammalian neuron physiology. Front Cell Neurosci 9:432 [Journal] [PubMed]

  • Concentration dependent nonlinear K+ and Cl- leak current (Huang et al. 2015) [Model]

Hyun JH, Eom K, Lee KH, Bae JY, Bae YC, Kim MH, Kim S, Ho WK, Lee SH (2015) Kv1.2 mediates heterosynaptic modulation of direct cortical synaptic inputs in CA3 pyramidal cells. J Physiol 593:3617-43 [Journal] [PubMed]

  • CA3 pyramidal neurons: Kv1.2 mediates modulation of cortical inputs (Hyun et al., 2015) [Model]

Inoue M, Hashimoto Y, Kudo Y, Miyakawa H (2001) Dendritic attenuation of synaptic potentials in the CA1 region of rat hippocampal slices detected with an optical method. Eur J Neurosci 13:1711-21 [PubMed]

Jaffe DB, Carnevale NT (1999) Passive normalization of synaptic integration influenced by dendritic architecture. J Neurophysiol 82:3268-85 [Journal] [PubMed]

Jamieson J, Boyd HD, McLachlan EM (2003) Simulations to derive membrane resistivity in three phenotypes of guinea pig sympathetic postganglionic neuron. J Neurophysiol 89:2430-40 [Journal] [PubMed]

Kapur A, Lytton WW, Ketchum KL, Haberly LB (1997) Regulation of the NMDA component of EPSPs by different components of postsynaptic GABAergic inhibition: computer simulation analysis in piriform cortex. J Neurophysiol 78:2546-59 [Journal] [PubMed]

Kotaleski JH, Plenz D, Blackwell KT (2006) Using potassium currents to solve signal-to-noise problems in inhibitory feedforward networks of the striatum. J Neurophysiol 95:331-41 [Journal] [PubMed]

  • FS Striatal interneuron: K currents solve signal-to-noise problems (Kotaleski et al 2006) [Model]

Larkum ME, Launey T, Dityatev A, Lüscher HR (1998) Integration of excitatory postsynaptic potentials in dendrites of motoneurons of rat spinal cord slice cultures. J Neurophysiol 80:924-35 [Journal] [PubMed]

Lipowsky R, Gillessen T, Alzheimer C (1996) Dendritic Na+ channels amplify EPSPs in hippocampal CA1 pyramidal cells. J Neurophysiol 76:2181-91 [Journal] [PubMed]

Mainen ZF, Joerges J, Huguenard JR, Sejnowski TJ (1995) A model of spike initiation in neocortical pyramidal neurons. Neuron 15:1427-39 [PubMed]

  • Spike Initiation in Neocortical Pyramidal Neurons (Mainen et al 1995) [Model]

Major G, Polsky A, Denk W, Schiller J, Tank DW (2008) Spatiotemporally graded NMDA spike/plateau potentials in basal dendrites of neocortical pyramidal neurons. J Neurophysiol 99:2584-601 [Journal] [PubMed]

Malerba P, Krishnan GP, Fellous JM, Bazhenov M (2016) Hippocampal CA1 Ripples as Inhibitory Transients. PLoS Comput Biol 12:e1004880 [Journal] [PubMed]

  • CA1 pyramidal cells, basket cells, ripples (Malerba et al 2016) [Model]

Meeks JP, Mennerick S (2007) Action potential initiation and propagation in CA3 pyramidal axons. J Neurophysiol 97:3460-72 [Journal] [PubMed]

Mennerick S, Zenisek D, Matthews G (1997) Static and dynamic membrane properties of large-terminal bipolar cells from goldfish retina: experimental test of a compartment model. J Neurophysiol 78:51-62 [Journal] [PubMed]

  • Recording from rod bipolar axon terminals in situ (Oltedal et al 2007) [Model]

Migliore M, Cook EP, Jaffe DB, Turner DA, Johnston D (1995) Computer simulations of morphologically reconstructed CA3 hippocampal neurons. J Neurophysiol 73:1157-68 [Journal] [PubMed]

  • CA3 Pyramidal Neuron (Migliore et al 1995) [Model]

Miyasho T, Takagi H, Suzuki H, Watanabe S, Inoue M, Kudo Y, Miyakawa H (2001) Low-threshold potassium channels and a low-threshold calcium channel regulate Ca2+ spike firing in the dendrites of cerebellar Purkinje neurons: a modeling study. Brain Res 891:106-15 [PubMed]

  • Cerebellar purkinje cell: K and Ca channels regulate APs (Miyasho et al 2001) [Model]

Moriyoshi Y, Takeuchi T (1991) [Exocrine pancreatic function tests]. Rinsho Byori Suppl 89:49-57 [PubMed]

Nörenberg A, Hu H, Vida I, Bartos M, Jonas P (2010) Distinct nonuniform cable properties optimize rapid and efficient activation of fast-spiking GABAergic interneurons. Proc Natl Acad Sci U S A 107:894-9 [Journal] [PubMed]

  • Detailed passive cable model of Dentate Gyrus Basket Cells (Norenberg et al. 2010) [Model]

O'Connor S, Angelo K, Jacob TJC (2012) Burst firing versus synchrony in a gap junction connected olfactory bulb mitral cell network model Frontiers in Computational Neuroscience 6:75:1-18 [Journal] [PubMed]

  • Olfactory bulb mitral cell gap junction NN model: burst firing and synchrony (O`Connor et al. 2012) [Model]

Oltedal L, Mørkve SH, Veruki ML, Hartveit E (2007) Patch-clamp investigations and compartmental modeling of rod bipolar axon terminals in an in vitro thin-slice preparation of the mammalian retina. J Neurophysiol 97:1171-87 [Journal] [PubMed]

  • Recording from rod bipolar axon terminals in situ (Oltedal et al 2007) [Model]

Peron SP, Krapp HG, Gabbiani F (2007) Influence of electrotonic structure and synaptic mapping on the receptive field properties of a collision-detecting neuron. J Neurophysiol 97:159-77 [Journal] [PubMed]

Perreault MC, Raastad M (2006) Contribution of morphology and membrane resistance to integration of fast synaptic signals in two thalamic cell types. J Physiol 577:205-20 [Journal] [PubMed]

Pospischil M, Toledo-Rodriguez M, Monier C, Piwkowska Z, Bal T, Frégnac Y, Markram H, Destexhe A (2008) Minimal Hodgkin-Huxley type models for different classes of cortical and thalamic neurons. Biol Cybern 99:427-41 [Journal] [PubMed]

  • Hodgkin-Huxley models of different classes of cortical neurons (Pospischil et al. 2008) [Model]

Raastad M, Enríquez-Denton M, Kiehn O (1998) Synaptic signaling in an active central network only moderately changes passive membrane properties. Proc Natl Acad Sci U S A 95:10251-6 [PubMed]

Rapp M, Yarom Y, Segev I (1996) Modeling back propagating action potential in weakly excitable dendrites of neocortical pyramidal cells. Proc Natl Acad Sci U S A 93:11985-90 [PubMed]

Roberts CB, Best JA, Suter KJ (2006) Dendritic processing of excitatory synaptic input in hypothalamic gonadotropin releasing-hormone neurons. Endocrinology 147:1545-55 [Journal] [PubMed]

  • Dendritic processing of excitatory synaptic input in GnRH neurons (Roberts et al. 2006) [Model]

Roth A, Häusser M (2001) Compartmental models of rat cerebellar Purkinje cells based on simultaneous somatic and dendritic patch-clamp recordings. J Physiol 535:445-72 [PubMed]

Rusakov DA, Stewart MG, Korogod SM (1996) Branching of active dendritic spines as a mechanism for controlling synaptic efficacy. Neuroscience 75:315-23 [PubMed]

  • Spine fusion and branching affects synaptic response (Rusakov et al 1996, 1997) [Model]

Sanchez RM, Surkis A, Leonard CS (1998) Voltage-clamp analysis and computer simulation of a novel cesium-resistant A-current in guinea pig laterodorsal tegmental neurons. J Neurophysiol 79:3111-26 [Journal] [PubMed]

Schaefer AT, Helmstaedter M, Sakmann B, Korngreen A (2003) Correction of conductance measurements in non-space-clamped structures: 1. Voltage-gated K+ channels. Biophys J 84:3508-28 [Journal] [PubMed]

  • Correcting space clamp in dendrites (Schaefer et al. 2003 and 2007) [Model]

Schaefer AT, Helmstaedter M, Schmitt AC, Bar-Yehuda D, Almog M, Ben-Porat H, Sakmann B, Korngreen A (2007) Dendritic voltage-gated K+ conductance gradient in pyramidal neurones of neocortical layer 5B from rats. J Physiol 579:737-52 [Journal] [PubMed]

  • Correcting space clamp in dendrites (Schaefer et al. 2003 and 2007) [Model]

Schaefer AT, Larkum ME, Sakmann B, Roth A (2003) Coincidence detection in pyramidal neurons is tuned by their dendritic branching pattern. J Neurophysiol 89:3143-54 [Journal] [PubMed]

  • Pyramidal neuron coincidence detection tuned by dendritic branching pattern (Schaefer et al 2003) [Model]

Schiller J, Major G, Koester HJ, Schiller Y (2000) NMDA spikes in basal dendrites of cortical pyramidal neurons. Nature 404:285-9 [Journal] [PubMed]

Schmidt-Hieber C, Jonas P, Bischofberger J (2007) Subthreshold dendritic signal processing and coincidence detection in dentate gyrus granule cells. J Neurosci 27:8430-41 [Journal] [PubMed]

  • Dentate gyrus granule cell: subthreshold signal processing (Schmidt-Hieber et al. 2007) [Model]

Soltesz I, Smetters DK, Mody I (1995) Tonic inhibition originates from synapses close to the soma. Neuron 14:1273-83 [PubMed]

Steuber V, De Schutter E, Jaeger D (2004) Passive models of neurons in the deep cerebellar nuclei: the effect of reconstruction errors Neurocomputing 58-60:563-568 [Journal]

  • Robust transmission in the inhibitory Purkinje Cell to Cerebellar Nuclei pathway (Abbasi et al 2017) [Model]

Stuart G, Spruston N (1998) Determinants of voltage attenuation in neocortical pyramidal neuron dendrites. J Neurosci 18:3501-10 [PubMed]

  • Pyramidal Neuron Deep: attenuation in dendrites (Stuart, Spruston 1998) [Model]

Surkis A, Peskin CS, Tranchina D, Leonard CS (1998) Recovery of cable properties through active and passive modeling of subthreshold membrane responses from laterodorsal tegmental neurons. J Neurophysiol 80:2593-607 [Journal] [PubMed]

Szoboszlay M, Lorincz A, Lanore F, Vervaeke K, Silver RA, Nusser Z (2016) Functional Properties of Dendritic Gap Junctions in Cerebellar Golgi Cells. Neuron 90:1043-56 [Journal] [PubMed]

  • Functional properties of dendritic gap junctions in Cerebellar Golgi cells (Szoboszlay et al. 2016) [Model]

Tabak J, Murphey CR, Moore LE (2000) Parameter estimation methods for single neuron models. J Comput Neurosci 9:215-36 [PubMed]

Thurbon D, Lüscher HR, Hofstetter T, Redman SJ (1998) Passive electrical properties of ventral horn neurons in rat spinal cord slices. J Neurophysiol 79:2485-502 [Journal] [PubMed]

Tóth TI, Crunelli V (1998) Effects of tapering geometry and inhomogeneous ion channel distribution in a neuron model. Neuroscience 84:1223-32 [PubMed]

Tóth TI, Crunelli V (1999) Solution of the nerve cable equation using Chebyshev approximations. J Neurosci Methods 87:119-36 [PubMed]

Trevelyan AJ, Jack J (2002) Detailed passive cable models of layer 2/3 pyramidal cells in rat visual cortex at different temperatures. J Physiol 539:623-36 [Journal] [PubMed]

Winslow JL, Jou SF, Wang S, Wojtowicz JM (1999) Signals in stochastically generated neurons. J Comput Neurosci 6:5-26 [PubMed]

Zhu JJ, Uhlrich DJ, Lytton WW (1999) Properties of a hyperpolarization-activated cation current in interneurons in the rat lateral geniculate nucleus. Neuroscience 92:445-57 [PubMed]

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