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Watts DJ, Strogatz SH (1998) Collective dynamics of 'small-world' networks. Nature 393:440-2 [PubMed]

References and models cited by this paper

References and models that cite this paper

Akin M, Onderdonk A, Guo Y (2017) Effects of local network topology on the functional reconstruction of spiking neural network models. Appl Netw Sci 2:22 [Journal] [PubMed]

Beverlin B, Kakalios J, Nykamp D, Netoff TI (2012) Dynamical changes in neurons during seizures determine tonic to clonic shift. J Comput Neurosci 33:41-51 [Journal] [PubMed]

  • Epileptic seizure model with Morris-Lecar neurons (Beverlin and Netoff 2011) [Model]

Bogaard A, Parent J, Zochowski M, Booth V (2009) Interaction of cellular and network mechanisms in spatiotemporal pattern formation in neuronal networks. J Neurosci 29:1677-87 [Journal] [PubMed]

  • Small world networks of Type I and Type II Excitable Neurons (Bogaard et al. 2009) [Model]

Dominguez D, Koroutchev K, Serrano E, Rodríguez FB (2007) Information and topology in attractor neural networks. Neural Comput 19:956-73 [Journal] [PubMed]

Dyhrfjeld-Johnsen J, Santhakumar V, Morgan RJ, Huerta R, Tsimring L, Soltesz I (2007) Topological determinants of epileptogenesis in large-scale structural and functional models of the dentate gyrus derived from experimental data. J Neurophysiol 97:1566-87 [Journal] [PubMed]

  • Dentate gyrus (Morgan et al. 2007, 2008, Santhakumar et al. 2005, Dyhrfjeld-Johnsen et al. 2007) [Model]

French DA, Gruenstein EI (2006) An integrate-and-fire model for synchronized bursting in a network of cultured cortical neurons. J Comput Neurosci 21:227-41 [Journal] [PubMed]

Gal E, London M, Globerson A, Ramaswamy S, Reimann MW, Muller E, Markram H, Segev I (2017) Rich cell-type-specific network topology in neocortical microcircuitry. Nat Neurosci 20:1004-1013 [Journal] [PubMed]

  • The neocortical microcircuit collaboration portal (Markram et al. 2015) [Model]

Gleeson P, Steuber V, Silver RA (2007) neuroConstruct: a tool for modeling networks of neurons in 3D space. Neuron 54:219-35 [Journal] [PubMed]

Haeusler S, Maass W (2007) A statistical analysis of information-processing properties of lamina-specific cortical microcircuit models. Cereb Cortex 17:149-62 [Journal] [PubMed]

  • Information-processing in lamina-specific cortical microcircuits (Haeusler and Maass 2006) [Model]

Herzog A, Kube K, Michaelis B, De_lima AD, Voigt T (2007) Displaced strategies optimize connectivity in neocortical networks Neurocomputing 70:1121-1129 [Journal]

Humphries MD, Gurney K, Prescott TJ (2006) The brainstem reticular formation is a small-world, not scale-free, network. Proc Biol Sci 273:503-11 [Journal] [PubMed]

  • Medial reticular formation of the brainstem: anatomy and dynamics (Humphries et al. 2006, 2007) [Model]

Humphries MD, Wood R, Gurney K (2009) Dopamine-modulated dynamic cell assemblies generated by the GABAergic striatal microcircuit. Neural Netw 22:1174-88 [Journal] [PubMed]

  • Striatal GABAergic microcircuit, dopamine-modulated cell assemblies (Humphries et al. 2009) [Model]

Kaiser M, Hilgetag CC (2010) Optimal hierarchical modular topologies for producing limited sustained activation of neural networks Front. Neuroinform. [Journal]

  • Network topologies for producing limited sustained activation (Kaiser and Hilgetag 2010) [Model]

Kitano K, Fukai T (2007) Variability v.s. synchronicity of neuronal activity in local cortical network models with different wiring topologies. J Comput Neurosci 23:237-50 [Journal] [PubMed]

Mäki-Marttunen T, Acimovic J, Ruohonen K, Linne ML (2013) Structure-dynamics relationships in bursting neuronal networks revealed using a prediction framework. PLoS One 8:e69373 [Journal] [PubMed]

  • Structure-dynamics relationships in bursting neuronal networks revealed (Mäki-Marttunen et al. 2013) [Model]

Mäki-Marttunen T, Halnes G, Devor A, Metzner C, Dale AM, Andreassen OA, Einevoll GT (2018) A stepwise neuron model fitting procedure designed for recordings with high spatial resolution: Application to layer 5 pyramidal cells. J Neurosci Methods 293:264-283 [Journal] [PubMed]

  • Layer V pyramidal cell model with reduced morphology (Mäki-Marttunen et al 2018) [Model]

Morgan RJ, Santhakumar V, Soltesz I (2007) Modeling the dentate gyrus. Prog Brain Res 163:639-58 [Journal] [PubMed]

  • Dentate gyrus (Morgan et al. 2007, 2008, Santhakumar et al. 2005, Dyhrfjeld-Johnsen et al. 2007) [Model]

Morgan RJ, Soltesz I (2008) Nonrandom connectivity of the epileptic dentate gyrus predicts a major role for neuronal hubs in seizures. Proc Natl Acad Sci U S A 105:6179-84 [Journal] [PubMed]

  • Dentate gyrus (Morgan et al. 2007, 2008, Santhakumar et al. 2005, Dyhrfjeld-Johnsen et al. 2007) [Model]

Psujek S, Ames J, Beer RD (2006) Connection and coordination: the interplay between architecture and dynamics in evolved model pattern generators. Neural Comput 18:729-47 [Journal] [PubMed]

Reimann MW, Horlemann AL, Ramaswamy S, Muller EB, Markram H (2017) Morphological Diversity Strongly Constrains Synaptic Connectivity and Plasticity. Cereb Cortex 27:4570-4585 [Journal] [PubMed]

  • The neocortical microcircuit collaboration portal (Markram et al. 2015) [Model]

Tomm C, Avermann M, Petersen C, Gerstner W, Vogels TP (2014) Connection-type-specific biases make uniform random network models consistent with cortical recordings. J Neurophysiol 112:1801-14 [Journal] [PubMed]

van Ooyen A, Carnell A, de Ridder S, Tarigan B, Mansvelder HD, Bijma F, de Gunst M, van Pelt J (2014) Independently outgrowing neurons and geometry-based synapse formation produce networks with realistic synaptic connectivity. PLoS One 9:e85858 [Journal] [PubMed]

  • NETMORPH: creates NNs with realistic neuron morphologies (Koene et al. 2009, van Ooyen et al. 2014) [Model]

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