These neuronal models were used for the following papers:
Shu Y, Duque A, Yu YG, McCormick DA. Properties of action potential
initiation in neocortical pyramidal cells: evidence from whole cell
axon recordings. Journal of Neurophysiology. 97: 746-760, (2007).
Shu Y, Hasenstaub A, Duque A, Yu Y, McCormick DA (2006) Modulation of
intracortical synaptic potentials by presynaptic somatic membrane
potential. Nature 441: 761-765.
The model pyramidal cell with full dendritic tree and axon arbor is
for simulating the action potential generation process of pyramidal
cells in layer V of prefrontal cortex.
This code is used to calculate the spacial decay constant of main
This code is used to calculate the initiation point of action
potential in axon initial segment.
After running code, output data file is saved in a file called
"seg.dat" which can be analysized by the matlab code 'for_decay.m',
These model files were contributed by:
20111026 cad.mod capump.mod ih.mod release.mod updated to use
derivimplicit method. See files for more details.