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Simple and accurate Diffusion Approximation algor. for stochastic ion channels (Orio & Soudry 2012)
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" ... We derived the (Stochastic Differential Equations) SDE explicitly for any given ion channel kinetic scheme. The resulting generic equations were surprisingly simple and interpretable – allowing an easy, transparent and efficient (Diffusion Approximation) DA implementation, avoiding unnecessary approximations. The algorithm was tested in a voltage clamp simulation and in two different current clamp simulations, yielding the same results as (Markov Chains) MC modeling. Also, the simulation efficiency of this DA method demonstrated considerable superiority over MC methods, except when short time steps or low channel numbers were used."
Orio P, Soudry D (2012) Simple, fast and accurate implementation of the diffusion approximation algorithm for stochastic ion channels with multiple states.
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Neuron or other electrically excitable cell;
Orio, Patricio [patricio.orio at uv.cl];
for information about:
StochHH_K2 DA Vclamp.sci
StochHH_K2 DAss Vclamp.sci
StochHH_K2 Lss Vclamp.sci
StochHH_K2 MC Vclamp.sci
StochHH_K5 DA Vclamp.sci
StochHH_K5 DAG Vclamp.sci
StochHH_K5 DAGss Vclamp.sci
StochHH_K5 DAss Vclamp.sci
StochHH_K5 MC Vclamp.sci
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