Rate model of a cortical RS-FS-LTS network (Hayut et al. 2011)

 Download zip file 
Help downloading and running models
Accession:142199
A rate model of cortical networks composed of RS, FS and LTS neurons. Synaptic depression is modelled according to the Tsodyks-Markram scheme.
Reference:
1 . Hayut I, Fanselow EE, Connors BW, Golomb D (2011) LTS and FS inhibitory interneurons, short-term synaptic plasticity, and cortical circuit dynamics. PLoS Comput Biol 7:e1002248 [PubMed]
Model Information (Click on a link to find other models with that property)
Model Type: Realistic Network;
Brain Region(s)/Organism:
Cell Type(s): Neocortex fast spiking (FS) interneuron; Neocortex spiking regular (RS) neuron; Neocortex spiking low threshold (LTS) neuron;
Channel(s):
Gap Junctions:
Receptor(s):
Gene(s):
Transmitter(s):
Simulation Environment: C or C++ program;
Model Concept(s): Short-term Synaptic Plasticity; Rate-coding model neurons;
Implementer(s): Golomb, David [golomb at bgu.ac.il];
#define Mpar 20000
#define Mraw 200
#define Mline 2000
#define Mword 50

/* Structure Declaration */

typedef struct scan_val{
  double eps;
  char scan_type, bhv;
  int  seed;

  /* double parmina, parmaxa, para_ar[Mpar]; */
  /* int npara, ipara, npta, nrepeata; */
  /* char par1a[Mword], par2a[Mword]; */

  double parmin, parmax, par_ar[Mpar];
  int npar, ipar, npt, nrepeat, irepeat;
  char par1[Mword], par2[Mword];

  double dpar;
  char ptype; 
} scan_val;


/* Function Declaration */

void find_borders(char **ar_input, scan_val *svala, scan_val *sval, 
     int sm, avr_val *av, fl_st fl);
void find_one_border(double xl, double xr, 
     char **ar_input, scan_val *svala, scan_val *sval, int sm,
     avr_val *av, fl_st fl);
void update_and_run(char **ar_input, scan_val *svala, scan_val *sval, 
     int sm, avr_val *av, fl_st fl);
void read_first_input_line(scan_val *sval, fl_st fl);
void read_second_input_line(scan_val *sval, fl_st fl);
void read_file_old(char **ar_input, int skip_lines, int *nraw, fl_st fl);
void update_file_old(scan_val *sval, char **ar_input, int nraw, fl_st fl);
void write_file_old(char **ar_input, int nraw, fl_st fl);
int process_line_old(scan_val *sval, char line[], FILE *ftmp);
int process_line_no_colon_old(scan_val *sval, char line[]);
int process_line_yes_colon_old(scan_val *sval, char line[]);
void one_par(fl_st fl, int sm, avr_val *av);
void write_avr(scan_val svala, scan_val sval, avr_val av, int savr, fl_st fl);

Loading data, please wait...