ModelDB: Large scale model of the olfactory bulb (Yu et al., 2013)

Large scale model of the olfactory bulb (Yu et al., 2013)

Download zip file Auto-launch
Help downloading and running models

Model Information
Model File
Citations

Accession:144570

The readme file currently contains links to the results for all the 72 odors investigated in the paper, and the movie showing the network activity during learning of odor k3-3 (an aliphatic ketone).
Reference:
1 . Yu Y, McTavish TS, Valenti C, Hines ML, Shepherd GM, Migliore M (2013) Sparse distributed representation of odors in a large-scale olfactory bulb circuit PLoS Comput. Biol. 9(3):e1003014 [PubMed]

Model Information (Click on a link to find other models with that property)

Model Type:	Realistic Network; Channel/Receptor; Dendrite;
Brain Region(s)/Organism:	Olfactory bulb;
Cell Type(s):	Olfactory bulb main mitral cell; Olfactory bulb main interneuron granule MC cell;
Channel(s):	I Na,t; I A; I K;
Gap Junctions:
Receptor(s):	NMDA; Glutamate; Gaba;
Gene(s):
Transmitter(s):	Gaba; Glutamate;
Simulation Environment:	NEURON;
Model Concept(s):	Pattern Recognition; Activity Patterns; Bursting; Temporal Pattern Generation; Oscillations; Synchronization; Active Dendrites; Detailed Neuronal Models; Synaptic Plasticity; Action Potentials; Synaptic Integration; Unsupervised Learning; Olfaction;
Implementer(s):	Hines, Michael [Michael.Hines at Yale.edu]; Migliore, Michele [Michele.Migliore at Yale.edu];

Search NeuronDB for information about: Olfactory bulb main mitral cell; Olfactory bulb main interneuron granule MC cell; NMDA; Glutamate; Gaba; I Na,t; I A; I K; Gaba; Glutamate;

Download the displayed file

ThreshDetect.mod *

.hg_archival.txt

allsynhinton.hoc *

michele_movie.hoc

odors-forsim500-kensaku.txt

stim-AB-rnd-500mt.hoc

stim-o11o12.hoc

stim-o26d1-mnoise5hz-gnoise-5s.hoc

stim-o5high-o6low.hoc

stim-odors-AB-seq.hoc

stim-seq-rnd.hoc

subset_control.ses *

viewspikes1.hoc

weight_movie.hoc *

Loading data, please wait...