Crayfish hybrid experimental model (Chung et al. 2015)

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Accession:150697
The Crayfish hybrid experimental model is an AnimatLab v1 neuromechanical model of the crayfish thorax and 5th walking leg that provides a virtual periphery to the live crayfish central nervous system. Run in real time, levator and depressor muscles are excited by motor nerve discharges of the CNS. Up and down movement of the leg shortens and stretches a model stretch receptor that controls movement of a real stretch receptor that provides sensory feedback to the CNS. Real-time sensory feedback provided by the model increases the locomotor cycle frequency by three-fold.
Reference:
1 . Chung B, Bacqué-Cazenave J, Cofer DW, Cattaert D, Edwards DH (2015) The effect of sensory feedback on crayfish posture and locomotion: I. Experimental analysis of closing the loop. J Neurophysiol 113:1763-71 [PubMed]
Model Information (Click on a link to find other models with that property)
Model Type:
Brain Region(s)/Organism:
Cell Type(s):
Channel(s):
Gap Junctions:
Receptor(s):
Gene(s):
Transmitter(s): Acetylcholine;
Simulation Environment: AnimatLab v1;
Model Concept(s):
Implementer(s): Cofer, David [dcofer at neurorobotictech.com];
Search NeuronDB for information about:  Acetylcholine;
/
ChungEtAl2015
Backup
Crayfish Body Parts
Ant Lev Set Up.atvf
Command.atvf *
Crayfish Hybrid Experimental Model.aproj
Crayfish Hybrid Experimental Model.asim
Crayfish.abef
Crayfish.abpe
Crayfish.absys
Crayfish.afnn
Crayfish.arnn
Crayfish.astl
DataTool_4.atvf
DataTool_5.atvf
Depressor Set Up.atvf *
Distal Telson Rec Neurons.atvf *
Experiment Data.atvf
grass11.bmp *
gravel.bmp *
Ground.astl
Leg CB Angles.dat *
Leg5 Angles and Tensions.dat *
Motor Transducer.JNB *
MSIs.atvf *
Organism_1.abef *
Organism_1.abpe *
Organism_1.absys *
Organism_1.astl *
Post Lev Set Up.atvf *
Prox Telson Rec Neurons.atvf *
thorax.ase *
thorax.mtl *
thorax.obj *
thorax_collision.mtl *
thorax_collision.obj *
thorax_flipped.bmp *
Water.astl
                            
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<ID>9907768a-9ba9-4192-b022-97f9cfa04a27</ID>
<StartTime Value="0.5" Scale="None" Actual="0.5"/>
<EndTime Value="5" Scale="None" Actual="5"/>
<StepInterval Value="0" Scale="milli" Actual="0"/>
<AlwaysActive>False</AlwaysActive>
<Enabled>False</Enabled>
<ValueType>Constant</ValueType>
<Equation>100*sin(.5*t)</Equation>
<OrganismID>788969bd-7025-4b3f-b173-723fb1588ff8</OrganismID>
<NodeID>89a8c2a5-7b1e-4313-a136-d67dbcc96272</NodeID>
<CurrentOn Value="200" Scale="nano" Actual="2e-07"/>
<CurrentOff Value="0" Scale="nano" Actual="0"/>
<CurrentBurstOff Value="0" Scale="nano" Actual="0"/>
<CycleOnDuration Value="2" Scale="milli" Actual="0.002"/>
<CycleOffDuration Value="100" Scale="milli" Actual="0.1"/>
<BurstOnDuration Value="4.5" Scale="None" Actual="4.5"/>
<BurstOffDuration Value="0" Scale="None" Actual="0"/>
</Stimulus>
<Stimulus>
<AssemblyFile>animattools.dll</AssemblyFile>
<ClassName>AnimatTools.DataObjects.ExternalStimuli.MotorVelocity</ClassName>
<Name>CB Sinusoid</Name>
<ID>74ae1336-ce59-40f6-a381-f8df0f8d73f8</ID>
<StartTime Value="2.5" Scale="None" Actual="2.5"/>
<EndTime Value="25" Scale="None" Actual="25"/>
<StepInterval Value="0" Scale="milli" Actual="0"/>
<AlwaysActive>False</AlwaysActive>
<Enabled>False</Enabled>
<ValueType>Equation</ValueType>
<Equation>2.5*sin(3.14*t)</Equation>
<StructureID>788969bd-7025-4b3f-b173-723fb1588ff8</StructureID>
<PartID>74c44547-5eec-4102-960f-96fcb71f2f65</PartID>
<Velocity Value="500" Scale="centi" Actual="5"/>
<DisableMotorWhenDone>True</DisableMotorWhenDone>
</Stimulus>
<Stimulus>
<AssemblyFile>animattools.dll</AssemblyFile>
<ClassName>AnimatTools.DataObjects.ExternalStimuli.Force</ClassName>
<Name>Merus stim 4</Name>
<ID>96f35352-12d8-49c5-b3fd-ff4f6b5de080</ID>
<StartTime Value="40" Scale="None" Actual="40"/>
<EndTime Value="40.2" Scale="None" Actual="40.2"/>
<StepInterval Value="0" Scale="milli" Actual="0"/>
<AlwaysActive>False</AlwaysActive>
<Enabled>False</Enabled>
<ValueType>Constant</ValueType>
<Equation/>
<StructureID>788969bd-7025-4b3f-b173-723fb1588ff8</StructureID>
<PartID>4690cdd5-b5b2-4067-8e04-906f5ca847f8</PartID>
<PositionX Value="0" Scale="centi" Actual="0"/>
<PositionY Value="0.8" Scale="centi" Actual="0.008"/>
<PositionZ Value="0" Scale="centi" Actual="0"/>
<ForceX Value="0" Scale="None" Actual="0"/>
<ForceY Value="0.5" Scale="None" Actual="0.5"/>
<ForceZ Value="0" Scale="None" Actual="0"/>
<TorqueX Value="0" Scale="None" Actual="0"/>
<TorqueY Value="0" Scale="None" Actual="0"/>
<TorqueZ Value="0" Scale="None" Actual="0"/>
</Stimulus>
</Stimuli>
<DockingConfig FormatVersion="5" InsideFill="False" InnerMinimum="20, 20">
  <Content Name="Simulation Controller" Visible="True" Docked="True" AutoHidden="True" CaptionBar="True" CloseButton="True" DisplaySize="150, 102" DisplayLocation="409, 856" AutoHideSize="150, 102" FloatingSize="150, 150" FullTitle="Simulation Controller">
    <DefaultRestore Type="Crownwood.Magic.Docking.RestoreContentState">
      <Content Name="Simulation Controller" />
      <State Value="DockLeft" />
      <Child Type="null" />
    </DefaultRestore>
    <AutoHideRestore Type="Crownwood.Magic.Docking.RestoreAutoHideAffinity">
      <Content Name="Simulation Controller" />
      <State Value="DockBottom" />
      <Next Count="0" />
      <Previous Count="0" />
      <NextAll Count="0" />
      <PreviousAll Count="0" />
      <Child Type="null" />
    </AutoHideRestore>
    <DockingRestore Type="Crownwood.Magic.Docking.RestoreContentDockingAffinity">
      <Content Name="Simulation Controller" />
      <State Value="DockBottom" />
      <Position Size="1288, 113" Location="409, 856" />
      <Best Count="1">
        <Item Name="Simulation Controller" />
      </Best>
      <Next Count="0" />
      <Previous Count="0" />
      <NextAll Count="0" />
      <PreviousAll Count="0" />
      <Child Type="Crownwood.Magic.Docking.RestoreZoneAffinity">
        <Content Name="Simulation Controller" />
        <Space Value="100" />
        <Best Count="1">
          <Item Name="Simulation Controller" />
        </Best>
        <Next Count="0" />
        <Previous Count="0" />
        <Child Type="Crownwood.Magic.Docking.RestoreWindowContent">
          <Content Name="Simulation Controller" />
          <Next Count="0" />
          <Previous Count="0" />
          <Selected Value="True" />
          <Child Type="null" />
        </Child>
      </Child>
    </DockingRestore>
    <FloatingRestore Type="Crownwood.Magic.Docking.RestoreContentFloatingAffinity">
      <Content Name="Simulation Controller" />
      <State Value="Floating" />
      <Position Size="150, 168" Location="409, 856" />
      <Best Count="0" />
      <Associates Count="0" />
      <Child Type="Crownwood.Magic.Docking.RestoreZoneAffinity">
        <Content Name="Simulation Controller" />
        <Space Value="100" />
        <Best Count="0" />
        <Next Count="0" />
        <Previous Count="0" />
        <Child Type="Crownwood.Magic.Docking.RestoreWindowContent">
          <Content Name="Simulation Controller" />
          <Next Count="0" />
          <Previous Count="0" />
          <Selected Value="True" />
          <Child Type="null" />
        </Child>
      </Child>
    </FloatingRestore>
  </Content>
  <Content Name="Project Toolbox" Visible="True" Docked="True" AutoHidden="True" CaptionBar="True" CloseButton="True" DisplaySize="20, 150" DisplayLocation="150, 150" AutoHideSize="20, 150" FloatingSize="150, 150" FullTitle="Project Toolbox">
    <DefaultRestore Type="Crownwood.Magic.Docking.RestoreContentState">
      <Content Name="Project Toolbox" />
      <State Value="DockLeft" />
      <Child Type="null" />
    </DefaultRestore>
    <AutoHideRestore Type="Crownwood.Magic.Docking.RestoreAutoHideAffinity">
      <Content Name="Project Toolbox" />
      <State Value="DockLeft" />
      <Next Count="0" />
      <Previous Count="0" />
      <NextAll Count="1">
        <Item Name="Project Workspace" />
      </NextAll>
      <PreviousAll Count="0" />
      <Child Type="null" />
    </AutoHideRestore>
    <DockingRestore Type="Crownwood.Magic.Docking.RestoreContentDockingAffinity">
      <Content Name="Project Toolbox" />
      <State Value="DockLeft" />
      <Position Size="150, 150" Location="150, 150" />
      <Best Count="1">
        <Item Name="Project Toolbox" />
      </Best>
      <Next Count="1">
        <Item Name="Project Workspace" />
      </Next>
      <Previous Count="0" />
      <NextAll Count="1">
        <Item Name="Project Workspace" />
      </NextAll>
      <PreviousAll Count="0" />
      <Child Type="Crownwood.Magic.Docking.RestoreZoneAffinity">
        <Content Name="Project Toolbox" />
        <Space Value="100" />
        <Best Count="1">
          <Item Name="Project Toolbox" />
        </Best>
        <Next Count="0" />
        <Previous Count="0" />
        <Child Type="Crownwood.Magic.Docking.RestoreWindowContent">
          <Content Name="Project Toolbox" />
          <Next Count="0" />
          <Previous Count="0" />
          <Selected Value="True" />
          <Child Type="null" />
        </Child>
      </Child>
    </DockingRestore>
    <FloatingRestore Type="Crownwood.Magic.Docking.RestoreContentState">
      <Content Name="Project Toolbox" />
      <State Value="Floating" />
      <Child Type="null" />
    </FloatingRestore>
  </Content>
  <Content Name="Project Workspace" Visible="True" Docked="True" AutoHidden="True" CaptionBar="True" CloseButton="True" DisplaySize="356, 150" DisplayLocation="150, 150" AutoHideSize="356, 150" FloatingSize="150, 150" FullTitle="Project Workspace">
    <DefaultRestore Type="Crownwood.Magic.Docking.RestoreContentState">
      <Content Name="Project Workspace" />
      <State Value="DockLeft" />
      <Child Type="null" />
    </DefaultRestore>
    <AutoHideRestore Type="Crownwood.Magic.Docking.RestoreAutoHideAffinity">
      <Content Name="Project Workspace" />
      <State Value="DockLeft" />
      <Next Count="0" />
      <Previous Count="0" />
      <NextAll Count="0" />
      <PreviousAll Count="1">
        <Item Name="Project Toolbox" />
      </PreviousAll>
      <Child Type="null" />
    </AutoHideRestore>
    <DockingRestore Type="Crownwood.Magic.Docking.RestoreContentDockingAffinity">
      <Content Name="Project Workspace" />
      <State Value="DockLeft" />
      <Position Size="415, 150" Location="150, 150" />
      <Best Count="1">
        <Item Name="Project Workspace" />
      </Best>
      <Next Count="0" />
      <Previous Count="0" />
      <NextAll Count="0" />
      <PreviousAll Count="0" />
      <Child Type="Crownwood.Magic.Docking.RestoreZoneAffinity">
        <Content Name="Project Workspace" />
        <Space Value="100" />
        <Best Count="1">
          <Item Name="Project Workspace" />
        </Best>
        <Next Count="0" />
        <Previous Count="0" />
        <Child Type="Crownwood.Magic.Docking.RestoreWindowContent">
          <Content Name="Project Workspace" />
          <Next Count="0" />
          <Previous Count="0" />
          <Selected Value="True" />
          <Child Type="null" />
        </Child>
      </Child>
    </DockingRestore>
    <FloatingRestore Type="Crownwood.Magic.Docking.RestoreContentState">
      <Content Name="Project Workspace" />
      <State Value="Floating" />
      <Child Type="null" />
    </FloatingRestore>
  </Content>
</DockingConfig>
</Project>

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