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Ribbon Synapse (Sikora et al 2005)
 
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Accession:
50997
A model of the ribbon synapse was developed to replicate both pre- and postsynaptic functions of this glutamatergic juncture. The presynaptic portion of the model is rich in anatomical and physiological detail and includes multiple release sites for each ribbon based on anatomical studies of presynaptic terminals, presynaptic voltage at the terminal, the activation of voltage-gated calcium channels and a calcium-dependent release mechanism whose rate varies as a function of the calcium concentration that is monitored at two different sites which control both an ultrafast, docked pool of vesicles and a release ready pool of tethered vesicles. See paper for more and details.
Reference:
1 .
Sikora MA, Gottesman J, Miller RF (2005) A computational model of the ribbon synapse.
J Neurosci Methods
145
:47-61
[
PubMed
]
Model Information
(Click on a link to find other models with that property)
Model Type:
Synapse;
Brain Region(s)/Organism:
Cell Type(s):
Retina ganglion GLU cell;
Retina bipolar GLU cell;
Channel(s):
I L high threshold;
Gap Junctions:
Receptor(s):
AMPA;
NMDA;
Gene(s):
Transmitter(s):
Glutamate;
Simulation Environment:
NEURON;
Model Concept(s):
Intrinsic plasticity;
Calcium dynamics;
Implementer(s):
Sikora, Michael [Sikora at umn.edu];
Search NeuronDB
for information about:
Retina ganglion GLU cell
;
Retina bipolar GLU cell
;
AMPA
;
NMDA
;
I L high threshold
;
Glutamate
;
Download the displayed file
/
Ribbon
readme.txt
caconc.mod
cagf.mod
capump.mod
casimple.mod
modulate.mod
rib_ufp.mod
ribbon_tiger.mod
spike.mod
*
Other models using spike.mod:
A network model of the vertebrate retina (Publio et al. 2009)
Salamander retinal ganglian cells: morphology influences firing (Sheasby, Fohlmeister 1999)
Salamander retinal ganglion cell: ion channels (Fohlmeister, Miller 1997)
tsbp.mod
vclmp.mod
bp.dat
fig7.hoc
fig7.ses
fig8.hoc
fig8a.ses
fig8b.ses
fig8c.ses
fig8c_250ms.ses
fig8c_8ms.ses
fig9-11.hoc
gc.nrn
hocload.tmp
makefig7.hoc
makefig8a.hoc
makefig8b.hoc
makefig8c.hoc
makefig8c_250ms.hoc
mosinit.hoc
tiger.ses
load_file("fig8.hoc") load_file("fig8c.ses") {init() run()}
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Fig 7
Fig 8a
Fig 8b
Fig 8c
Fig 8c_250
Fig 9
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