Simulation of power-law dynamic gate variables in the Hodgkin-Huxley
model using fractional order derivatives.
Teka W, Stockton D, Santamaria F. "Power-law dynamics of membrane
conductances increase spiking diversity in a Hdgkin-Huxley model" PLoS
Computational Biology, in press, 2016.
If you use this software please reference our paper.
This package have several matlab codes and functions. The main codes just to do simulations
of figures are: Tekaetal2016_SingleGates.m and Tekaetal2016_SingleAP.m.
In the file Tekaetal2016_SingleGates.m, there are 6 sections that compute the simulations and
analyze the results for Figures 1 and 2 of our paper. Section 1-3 simulate voltage clamp on the individual gates having
power-law dynamcis. They correspond to figure 1 in the paper.Section 4-6 analyze the data produced by section 1-3.
In the file Tekaetal2016_SingleAP.m, sections 7-9 generate a few action potentials.
Sections 10-12 analyze these data which corresponds to Figure 2.
The other figures were generate by running sections 7-9 for very long
periods of time. They require super-computer resources and multiple days
of simulation time. You can request the data files.