Compartmental differences in cAMP signaling pathways in hippocam. CA1 pyr. cells (Luczak et al 2017)

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Accession:245529
Model of cAMP signaling pathways in hippocampal CA1 pyramidal neurons investigate mechanisms underlying the experimentally observed difference in cAMP and PKA FRET between proximal and distal dendrites. Simulations show that compartmental difference in PKA activity required enrichment of protein phosphatase in small compartments; neither reduced PKA subunits nor increased PKA substrates were sufficient.
Reference:
1 . Luczak V, Blackwell KT, Abel T, Girault JA, Gervasi N (2017) Dendritic diameter influences the rate and magnitude of hippocampal cAMP and PKA transients during ß-adrenergic receptor activation. Neurobiol Learn Mem 138:10-20 [PubMed]
Model Information (Click on a link to find other models with that property)
Model Type: Molecular Network;
Brain Region(s)/Organism: Hippocampus; Mouse;
Cell Type(s): Hippocampus CA1 pyramidal GLU cell;
Channel(s):
Gap Junctions:
Receptor(s): Adrenergic;
Gene(s):
Transmitter(s): Norephinephrine;
Simulation Environment:
Model Concept(s): G-protein coupled; Influence of Dendritic Geometry; Reaction-diffusion;
Implementer(s): Blackwell, Avrama [avrama at gmu.edu];
Search NeuronDB for information about:  Hippocampus CA1 pyramidal GLU cell; Adrenergic; Norephinephrine;
java -Dstochdiff.log=false -jar /home/neuroware/stochdif/stochdiff-3.0.0-8.jar Model_VinceCaPKAsubset6.5uACsamepR_L1000.xml &
#java -Dstochdiff.log=false -jar /home/neuroware/stochdif/stochdiff-3.0.0-8.jar Model_VinceCaPKAsubsetpR_6.5u-PKAx1-L100.xml &
#java -Dstochdiff.log=false -jar /home/neuroware/stochdif/stochdiff-3.0.0-8.jar Model_VinceCaPKAsubsetpR_6.5u-PKAx1-L1000.xml &
#java -Dstochdiff.log=false -jar /home/neuroware/stochdif/stochdiff-3.0.0-8.jar Model_VinceCaPKAsubsetpR_6.5u-PKAx3-L1000.xml &
#java -Dstochdiff.log=false -jar /home/neuroware/stochdif/stochdiff-3.0.0-8.jar Model_VinceCaPKA_I1PP1_6.5u-X2-PP1.5.xml &
java -Dstochdiff.log=false -jar /home/neuroware/stochdif/stochdiff-3.0.0-8.jar Model_VinceCaPKAsubset1.5uACsamepR_L1000.xml &
#java -Dstochdiff.log=false -jar /home/neuroware/stochdif/stochdiff-3.0.0-8.jar Model_VinceCaPKAsubset1.5upR-L100.xml 
#java -Dstochdiff.log=false -jar /home/neuroware/stochdif/stochdiff-3.0.0-8.jar Model_VinceCaPKAsubset1.5upR-L1000.xml 
#java -Dstochdiff.log=false -jar /home/neuroware/stochdif/stochdiff-3.0.0-8.jar Model_VinceCaPKA_I1PP1_1.5u-X10-PP1.5.xml & 
#java -Dstochdiff.log=false -jar /home/neuroware/stochdif/stochdiff-3.0.0-8.jar Model_VinceCaPKA_I1PP1_1.5u-X10-PP3.5.xml &
#java -Dstochdiff.log=false -jar /home/neuroware/stochdif/stochdiff-3.0.0-8.jar Model_VinceCaPKA_I1PP1_1.5u-X2-PP2.5.xml &
#java -Dstochdiff.log=false -jar /home/neuroware/stochdif/stochdiff-3.0.0-8.jar Model_VinceCaPKA_I1PP1_1.5u-X2-PP3.5.xml &
#java -Dstochdiff.log=false -jar /home/neuroware/stochdif/stochdiff-3.0.0-8.jar Model_VinceCaPKA_I1PP1_1.5u-X2-PP1.5.xml&
#java -Dstochdiff.log=false -jar /home/neuroware/stochdif/stochdiff-3.0.0-8.jar Model_VinceCaPKA_I1PP1_1.5u-X2-PP4.5.xml &

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