Advanced search
SenseLab
SimToolDB
ModelDB Help
User account
Login
Register
Find models by
Model name
First author
Each author
Region(circuits)
Find models for
Cell type
Current
Receptor
Gene
Transmitters
Concept
Simulators
Methods
Find models of
Realistic Networks
Neurons
Electrical synapses (gap junctions)
Chemical synapses
Ion channels
Neuromuscular junctions
Axons
Pathophysiology
Other resources
SenseLab mailing list
ModelDB related resources
Computational neuroscience ecosystem
Models in a git repository
Auditory cortex layer IV network model (Beeman 2013)
 
Download zip file
Help downloading and running models
Model Information
Model File
Citations
Accession:
150678
"... The primary objective of this modeling study was to determine the effects of axonal conduction velocity (often neglected, but significant), as well as synaptic time constants, on the ability of such a network to create and propagate cortical waves. ... The model is also being used to study the interaction between single and two-tone input and normal background activity, and the effects of synaptic depression from thalamic inputs. The simulation scripts have the additional purpose of serving as tutorial examples for the construction of cortical networks with GENESIS. The present model has fostered the development of the G-3 Python network analysis and visualization tools used in this study... It is my hope that this short tutorial and the example simulation scripts can provide a head start for a graduate student or postdoc who is beginning a cortical modeling project. "
Reference:
1 .
Beeman D (2013) A modeling study of cortical waves in primary auditory cortex
BMC Neuroscience
14(Supl 1)
:P23
Model Information
(Click on a link to find other models with that property)
Model Type:
Realistic Network;
Brain Region(s)/Organism:
Auditory cortex;
Cell Type(s):
Neocortex L5/6 pyramidal GLU cell;
Neocortex V1 interneuron basket PV GABA cell;
Channel(s):
Gap Junctions:
Receptor(s):
Gene(s):
Transmitter(s):
Simulation Environment:
GENESIS;
Model Concept(s):
Activity Patterns;
Tutorial/Teaching;
Implementer(s):
Beeman, Dave;
Search NeuronDB
for information about:
Neocortex L5/6 pyramidal GLU cell
;
Neocortex V1 interneuron basket PV GABA cell
;
/
ACnet2-GENESIS
figures
Gpython-tools
README.html
README.rst
ACnet2-batch.g
ACnet2-docs.html
ACnet2-docs.txt
ACnet2-main.g
analysis_funcs5.g
basic_inputs.g
bask.p
*
Other models using bask.p:
ACnet23 primary auditory cortex model (Beeman et al 2019)
C0003Aasc_prop-sm.png
*
Other models using C0003Aasc_prop-sm.png:
Auditory cortex layer IV network model (Beeman 2013)
FSchans.g
*
Other models using FSchans.g:
ACnet23 primary auditory cortex model (Beeman et al 2019)
graphics2-5.g
input_graphics2-5.g
protodefs.g
pyr_4_asym.p
pyr_4_sym.p
pyrchans.g
replay_netview10.g
simple_inputs.g
spectra_funcs3.g
synapseinfo.g
File not selected
<- Select file from this column.
Loading data, please wait...