Advanced search
SenseLab
SimToolDB
ModelDB Help
User account
Login
Register
Find models by
Model name
First author
Each author
Region(circuits)
Find models for
Cell type
Current
Receptor
Gene
Transmitters
Concept
Simulators
Methods
Find models of
Realistic Networks
Neurons
Electrical synapses (gap junctions)
Chemical synapses
Ion channels
Neuromuscular junctions
Axons
Pathophysiology
Other resources
SenseLab mailing list
ModelDB related resources
Computational neuroscience ecosystem
Models in a git repository
Mechanisms of fast rhythmic bursting in a layer 2/3 cortical neuron (Traub et al 2003)
 
Download zip file
Help downloading and running models
Model Information
Model File
Citations
Model Views
Simulation Platform
Accession:
20756
This simulation is based on the reference paper listed below. This port was made by Roger D Traub and Maciej T Lazarewicz (mlazarew at seas.upenn.edu) Thanks to Ashlen P Reid for help with porting a morphology of the cell.
Reference:
1 .
Traub RD, Buhl EH, Gloveli T, Whittington MA (2003) Fast rhythmic bursting can be induced in layer 2/3 cortical neurons by enhancing persistent Na+ conductance or by blocking BK channels.
J Neurophysiol
89
:909-21
[
PubMed
]
Model Information
(Click on a link to find other models with that property)
Model Type:
Neuron or other electrically excitable cell;
Brain Region(s)/Organism:
Cell Type(s):
Neocortex L2/3 pyramidal GLU cell;
Channel(s):
I Na,p;
I Na,t;
I L high threshold;
I T low threshold;
I A;
I K;
I h;
I K,Ca;
I Sodium;
I Calcium;
I Potassium;
Gap Junctions:
Receptor(s):
Gene(s):
Transmitter(s):
Simulation Environment:
NEURON;
Model Concept(s):
Dendritic Action Potentials;
Bursting;
Active Dendrites;
Detailed Neuronal Models;
Axonal Action Potentials;
Calcium dynamics;
Implementer(s):
Lazarewicz, Maciej [mlazarew at gmu.edu];
Traub, Roger D [rtraub at us.ibm.com];
Search NeuronDB
for information about:
Neocortex L2/3 pyramidal GLU cell
;
I Na,p
;
I Na,t
;
I L high threshold
;
I T low threshold
;
I A
;
I K
;
I h
;
I K,Ca
;
I Sodium
;
I Calcium
;
I Potassium
;
Download the displayed file
/
Traub2003
readme.txt
ar.mod
*
Other models using ar.mod:
MEG of Somatosensory Neocortex (Jones et al. 2007)
Pyramidal neuron conductances state and STDP (Delgado et al. 2010)
cad.mod
*
Other models using cad.mod:
Rhesus Monkey Layer 3 Pyramidal Neurons: Young vs aged PFC (Coskren et al. 2015)
Rhesus Monkey Young and Aged L3 PFC Pyramidal Neurons (Rumbell et al. 2016)
cal.mod
cat.mod
*
Other models using cat.mod:
MEG of Somatosensory Neocortex (Jones et al. 2007)
k2.mod
ka.mod
*
Other models using ka.mod:
Pyramidal neuron conductances state and STDP (Delgado et al. 2010)
kahp.mod
*
Other models using kahp.mod:
Pyramidal neuron conductances state and STDP (Delgado et al. 2010)
kc.mod
kdr.mod
*
Other models using kdr.mod:
Synaptic integration in tuft dendrites of layer 5 pyramidal neurons (Larkum et al. 2009)
km.mod
*
Other models using km.mod:
Pyramidal neuron conductances state and STDP (Delgado et al. 2010)
naf.mod
nap.mod
*
Other models using nap.mod:
Pyramidal neuron conductances state and STDP (Delgado et al. 2010)
fig2.ses
fig4.ses
fig5.ses
fig9.ses
mosinit.hoc
pyr3.hoc
pyr3_template
load_file("nrngui.hoc") load_file("pyr3.hoc")
Load Model Views
Figure 2 ( left )
Figure 2 ( right )
Figure 4 Injection 0.6 nA
Figure 4 Injection 1.1 nA
Figure 4 Injection 1.5 nA
Figure 4 Injection 2.5 nA
Figure 5 B1
Figure 5 B2
Figure 6 B1
Figure 6 B2
Figure 7 g_NaP x 0.0
Figure 7 g_NaP x 0.7
Figure 7 g_NaP x 1.0
Loading data, please wait...