Neural mass model of spindle generation in the isolated thalamus (Schellenberger Costa et al. 2016)

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Accession:226473
The model generates different oscillatory patterns in the thalamus, including delta and spindle band oscillations.
References:
1 . Weigenand A, Schellenberger Costa M, Ngo HV, Claussen JC, Martinetz T (2014) Characterization of K-complexes and slow wave activity in a neural mass model. PLoS Comput Biol 10:e1003923 [PubMed]
2 . Schellenberger Costa M, Weigenand A, Ngo HV, Marshall L, Born J, Martinetz T, Claussen JC (2016) A Thalamocortical Neural Mass Model of the EEG during NREM Sleep and Its Response to Auditory Stimulation. PLoS Comput Biol 12:e1005022 [PubMed]
Model Information (Click on a link to find other models with that property)
Model Type: Neural mass;
Brain Region(s)/Organism: Thalamus;
Cell Type(s): Thalamus reticular nucleus GABA cell; Thalamus geniculate nucleus/lateral principal GLU cell;
Channel(s): I K,Ca; I Calcium;
Gap Junctions:
Receptor(s): Gaba; AMPA; NMDA;
Gene(s):
Transmitter(s):
Simulation Environment: Network; C or C++ program (web link to model); MATLAB (web link to model);
Model Concept(s): Calcium dynamics; Sleep; Activity Patterns; Oscillations; Bifurcation; Spindles; Audition;
Implementer(s): Schellenberger Costa, Michael [mschellenbergercosta at gmail.com];
Search NeuronDB for information about:  Thalamus geniculate nucleus/lateral principal GLU cell; Thalamus reticular nucleus GABA cell; AMPA; NMDA; Gaba; I K,Ca; I Calcium;
/*
 *	Copyright (c) 2015 University of Lübeck
 *
 *	Permission is hereby granted, free of charge, to any person obtaining a copy
 *	of this software and associated documentation files (the "Software"), to deal
 *	in the Software without restriction, including without limitation the rights
 *	to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
 *	copies of the Software, and to permit persons to whom the Software is
 *	furnished to do so, subject to the following conditions:
 *
 *	The above copyright notice and this permission notice shall be included in
 *	all copies or substantial portions of the Software.
 *
 *	THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
 *	IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
 *	FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
 *	AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
 *	LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
 *	OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
 *	THE SOFTWARE.
 *
 *	AUTHORS:	Michael Schellenberger Costa: mschellenbergercosta@gmail.com
 */

/******************************************************************************/
/*                        Functions for data storage                          */
/******************************************************************************/
#pragma once
#include <vector>
#include "Thalamic_Column.h"

void get_data(unsigned counter, Thalamic_Column& Thalamus, std::vector<double*>& pData) {
    pData[0][counter] = Thalamus.Vt 		[0];
    pData[0][counter] = Thalamus.Vr 		[0];
    pData[0][counter] = Thalamus.act_h 	();
}

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