Advanced search
SenseLab
SimToolDB
ModelDB Help
User account
Login
Register
Find models by
Model name
First author
Each author
Region(circuits)
Find models for
Cell type
Current
Receptor
Gene
Transmitters
Concept
Simulators
Methods
Find models of
Realistic Networks
Neurons
Electrical synapses (gap junctions)
Chemical synapses
Ion channels
Neuromuscular junctions
Axons
Pathophysiology
Other resources
SenseLab mailing list
ModelDB related resources
Computational neuroscience ecosystem
Models in a git repository
Cortical feedback alters visual response properties of dLGN relay cells (Martínez-Cañada et al 2018)
 
Download zip file
Help downloading and running models
Model Information
Model File
Citations
Accession:
239878
Network model that includes biophysically detailed, single-compartment and multicompartment neuron models of relay-cells and interneurons in the dLGN and a population of orientation-selective layer 6 simple cells, consisting of pyramidal cells (PY). We have considered two different arrangements of synaptic feedback from the ON and OFF zones in the visual cortex to the dLGN: phase-reversed (‘push-pull’) and phase-matched (‘push-push’), as well as different spatial extents of the corticothalamic projection pattern. This project is the result of a research work and its associated publication is: (Martínez-Cañada et al 2018). Installation instructions as well as the latest version can be found in the Github repository: https://github.com/CINPLA/biophysical_thalamocortical_system
Reference:
1 .
Martínez-Cañada P, Mobarhan MH, Halnes G, Fyhn M, Morillas C, Pelayo F, Einevoll GT (2018) Biophysical network modeling of the dLGN circuit: Effects of cortical feedback on spatial response properties of relay cells.
PLoS Comput Biol
14
:e1005930
[
PubMed
]
Model Information
(Click on a link to find other models with that property)
Model Type:
Realistic Network;
Brain Region(s)/Organism:
Thalamus;
Cell Type(s):
Channel(s):
Gap Junctions:
Receptor(s):
Gene(s):
Transmitter(s):
Simulation Environment:
LFPy;
NEURON;
NEST;
Python;
Model Concept(s):
Vision;
Implementer(s):
Martínez-Cañada, Pablo [pablomc at ugr.es];
Download the displayed file
/
Biophysical_thalamocortical_system
cortex_neurons
.README.swp
README
*
Other models using README:
Pyramidal Neuron: Deep, Thalamic Relay and Reticular, Interneuron (Destexhe et al 1998, 2001)
cadecay.mod
*
Other models using cadecay.mod:
Distinct current modules shape cellular dynamics in model neurons (Alturki et al 2016)
Distinct current modules shape cellular dynamics in model neurons (Alturki et al 2016)
Hodgkin-Huxley models of different classes of cortical neurons (Pospischil et al. 2008)
Low Threshold Calcium Currents in TC cells (Destexhe et al 1998)
Pyramidal Neuron: Deep, Thalamic Relay and Reticular, Interneuron (Destexhe et al 1998, 2001)
Rat LGN Thalamocortical Neuron (Connelly et al 2015, 2016)
hh2.mod
IM.mod
*
Other models using IM.mod:
Ca+/HCN channel-dependent persistent activity in multiscale model of neocortex (Neymotin et al 2016)
Hodgkin-Huxley model of persistent activity in PFC neurons (Winograd et al. 2008) (NEURON python)
Hodgkin-Huxley model of persistent activity in prefrontal cortex neurons (Winograd et al. 2008)
Hodgkin-Huxley models of different classes of cortical neurons (Pospischil et al. 2008)
Pyramidal Neuron: Deep, Thalamic Relay and Reticular, Interneuron (Destexhe et al 1998, 2001)
IT.mod
*
Other models using IT.mod:
Hodgkin-Huxley models of different classes of cortical neurons (Pospischil et al. 2008)
Pyramidal Neuron: Deep, Thalamic Relay and Reticular, Interneuron (Destexhe et al 1998, 2001)
demo_IN_FS.oc
*
Other models using demo_IN_FS.oc:
Pyramidal Neuron: Deep, Thalamic Relay and Reticular, Interneuron (Destexhe et al 1998, 2001)
demo_PY_LTS.oc
*
Other models using demo_PY_LTS.oc:
Pyramidal Neuron: Deep, Thalamic Relay and Reticular, Interneuron (Destexhe et al 1998, 2001)
demo_PY_RS.oc
*
Other models using demo_PY_RS.oc:
Pyramidal Neuron: Deep, Thalamic Relay and Reticular, Interneuron (Destexhe et al 1998, 2001)
mosinit.hoc
*
Other models using mosinit.hoc:
Knox implementation of Destexhe 1998 spike and wave oscillation model (Knox et al 2018)
Pyramidal Neuron: Deep, Thalamic Relay and Reticular, Interneuron (Destexhe et al 1998, 2001)
Thalamocortical and Thalamic Reticular Network (Destexhe et al 1996)
rundemo.hoc
*
Other models using rundemo.hoc:
Pyramidal Neuron: Deep, Thalamic Relay and Reticular, Interneuron (Destexhe et al 1998, 2001)
sIN_template
soma.hoc
*
Other models using soma.hoc:
Cortical feedback alters visual response properties of dLGN relay cells (Martínez-Cañada et al 2018)
sPY_template
sPYr_template
load_file("nrngui.hoc") load_file("rundemo.hoc")
Loading data, please wait...