Advanced search
SenseLab
SimToolDB
ModelDB Help
User account
Login
Register
Find models by
Model name
First author
Each author
Region(circuits)
Find models for
Cell type
Current
Receptor
Gene
Transmitters
Concept
Simulators
Methods
Find models of
Realistic Networks
Neurons
Electrical synapses (gap junctions)
Chemical synapses
Ion channels
Neuromuscular junctions
Axons
Pathophysiology
Other resources
SenseLab mailing list
ModelDB related resources
Computational neuroscience ecosystem
Models in a git repository
Levodopa-Induced Toxicity in Parkinson's Disease (Muddapu et al, 2022)
 
Download zip file
Help downloading and running models
Model Information
Model File
Citations
Accession:
263719
"... We present a systems-level computational model of SNc-striatum, which will help us understand the mechanism behind neurodegeneration postulated above and provide insights into developing disease-modifying therapeutics. It was observed that SNc terminals are more vulnerable to energy deficiency than SNc somas. During L-DOPA therapy, it was observed that higher L-DOPA dosage results in increased loss of terminals in SNc. It was also observed that co-administration of L-DOPA and glutathione (antioxidant) evades L-DOPA-induced toxicity in SNc neurons. Our proposed model of the SNc-striatum system is the first of its kind, where SNc neurons were modeled at a biophysical level, and striatal neurons were modeled at a spiking level. We show that our proposed model was able to capture L-DOPA-induced toxicity in SNc, caused by energy deficiency."
Reference:
1 .
Muddapu VR, Vijayakumar K, Ramakrishnan K, Chakravarthy VS (2022) A Multi-Scale Computational Model of Levodopa-Induced Toxicity in Parkinson's Disease
Front. Neurosci.
Model Information
(Click on a link to find other models with that property)
Model Type:
Realistic Network;
Brain Region(s)/Organism:
Basal ganglia;
Globus pallidus externa (GPe);
Striatum;
Subthalamic Nucleus;
Cell Type(s):
Substantia nigra pars compacta DA cell;
Neostriatum medium spiny direct pathway GABA cell;
Globus pallidus principal GABA cell;
Abstract Izhikevich neuron;
Hodgkin-Huxley neuron;
Subthalamus nucleus projection neuron;
Channel(s):
Na/K pump;
Na/Ca exchanger;
Kir;
IK Skca;
Ca pump;
I A;
I Ca,p;
I h;
I K,Ca;
I K;
I N;
Gap Junctions:
Receptor(s):
NMDA;
GabaA;
AMPA;
Gene(s):
Transmitter(s):
Dopamine;
Gaba;
Glutamate;
Simulation Environment:
MATLAB;
MATLAB (web link to model);
Model Concept(s):
Parkinson's;
Implementer(s):
Muddapu, Vignayanandam R. [vignan.0009 at gmail.com];
Chakravarthy, Srinivasa V. [schakra at iitm.ac.in];
Search NeuronDB
for information about:
Neostriatum medium spiny direct pathway GABA cell
;
Substantia nigra pars compacta DA cell
;
Globus pallidus principal GABA cell
;
GabaA
;
AMPA
;
NMDA
;
I N
;
I A
;
I K
;
I h
;
I K,Ca
;
Na/Ca exchanger
;
Na/K pump
;
I Ca,p
;
Ca pump
;
Kir
;
IK Skca
;
Dopamine
;
Gaba
;
Glutamate
;
/
LIT_model
readme.txt
calclatwts.m
ConvertAPtoST.m
deci2str.m
MAIN_LIT_model.m
MM_kin.m
mrcalculate.m
mrintercalculate.m
parsave_terminal_soma.m
RescaleRange.m
RUN_LIT_model.m
sub_sampling.m
sub_sampling_firings.m
sub_sampling_firings_GPU.m
sub_sampling_GPU.m
weightcal_gpe.m
weightcal_snc.m
weightcal_stn.m
File not selected
<- Select file from this column.
Loading data, please wait...