NEURON interfaces to MySQL and the SPUD feature extraction algorithm (Neymotin et al. 2008)

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Accession:97868
See the readme.txt for information on setting up this interface to a MySQL server from the NEURON simulator. Note the SPUD feature extraction algorithm includes its own readme in the spud directory.
Reference:
1 . Neymotin S, Uhlrich DJ, Manning KA, Lytton WW (2008) Data mining of time-domain features from neural extracellular field data Applic. of Comput. Intel. in Bioinf. and Biomed.: Current Trends and Open Problems 151:119-140
Model Information (Click on a link to find other models with that property)
Model Type:
Brain Region(s)/Organism:
Cell Type(s):
Channel(s):
Gap Junctions:
Receptor(s):
Gene(s):
Transmitter(s):
Simulation Environment: NEURON;
Model Concept(s): Methods;
Implementer(s): Lytton, William [bill.lytton at downstate.edu]; Neymotin, Sam [Samuel.Neymotin at nki.rfmh.org];
Files displayed below are from the implementation
/* Copyright (C) 2000 MySQL AB & Yuri Dario
   All the above parties has a full, independent copyright to
   the following code, including the right to use the code in
   any manner without any demands from the other parties.

   This library is free software; you can redistribute it and/or
   modify it under the terms of the GNU Library General Public
   License as published by the Free Software Foundation; version 2
   of the License.

   This library is distributed in the hope that it will be useful,
   but WITHOUT ANY WARRANTY; without even the implied warranty of
   MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
   Library General Public License for more details.

   You should have received a copy of the GNU Library General Public
   License along with this library; if not, write to the Free
   Software Foundation, Inc., 59 Temple Place - Suite 330, Boston,
   MA 02111-1307, USA */

/* Defines for OS2 to make it compatible for MySQL */

#ifndef __CONFIG_OS2_H__
#define __CONFIG_OS2_H__

#include <os2.h>
#include <math.h>
#include <io.h>
#include <types.h>

/* Define to name of system eg solaris*/
#define SYSTEM_TYPE "IBM OS/2 Warp"
/* Define to machine type name eg sun10 */
#define MACHINE_TYPE "i686"
/* Name of package */
#define PACKAGE "mysql"
/* Version number of package */
#define VERSION MYSQL_SERVER_VERSION
/* Default socket */
#define MYSQL_UNIX_ADDR "\\socket\\MySQL"

#define FN_LIBCHAR		 '\\'
#define FN_ROOTDIR		 "\\"
#define MY_NFILE		1024  /* This is only used to save filenames */

#define HAVE_ACCESS

#define DEFAULT_MYSQL_HOME	"c:\\mysql"
#define DEFAULT_BASEDIR		"C:\\"
#define SHAREDIR		"share"
#define DEFAULT_CHARSET_HOME	"C:/mysql/"
#define _POSIX_PATH_MAX		255
#define DWORD			ULONG

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#define SIGALRM		14		/* Alarm */

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#define bcmp(x,y,z)	memcmp((y),(x),(z))

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/* Define if you have the nsl_r library (-lnsl_r).  */
/* #undef HAVE_LIBNSL_R */

/* Define if you have the pthread library (-lpthread).	*/
/* #undef HAVE_LIBPTHREAD */

/* Define if you have the socket library (-lsocket).  */
/* #undef HAVE_LIBSOCKET */

/* Number of bits in a file offset, on hosts where this is settable. */
/* #undef _FILE_OFFSET_BITS */

/* Define to make fseeko etc. visible, on some hosts. */
/* #undef _LARGEFILE_SOURCE */

/* Define for large files, on AIX-style hosts. */
/* #undef _LARGE_FILES */

#endif /* __CONFIG_OS2_H__ */

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